Literature DB >> 25505353

Identification and nomenclature of the genus Penicillium.

C M Visagie1, J Houbraken1, J C Frisvad2, S-B Hong3, C H W Klaassen4, G Perrone5, K A Seifert6, J Varga7, T Yaguchi8, R A Samson1.   

Abstract

Penicillium is a diverse genus occurring worldwide and its species play important roles as decomposers of organic materials and cause destructive rots in the food industry where they produce a wide range of mycotoxins. Other species are considered enzyme factories or are common indoor air allergens. Although DNA sequences are essential for robust identification of Penicillium species, there is currently no comprehensive, verified reference database for the genus. To coincide with the move to one fungus one name in the International Code of Nomenclature for algae, fungi and plants, the generic concept of Penicillium was re-defined to accommodate species from other genera, such as Chromocleista, Eladia, Eupenicillium, Torulomyces and Thysanophora, which together comprise a large monophyletic clade. As a result of this, and the many new species described in recent years, it was necessary to update the list of accepted species in Penicillium. The genus currently contains 354 accepted species, including new combinations for Aspergillus crystallinus, A. malodoratus and A. paradoxus, which belong to Penicillium section Paradoxa. To add to the taxonomic value of the list, we also provide information on each accepted species MycoBank number, living ex-type strains and provide GenBank accession numbers to ITS, β-tubulin, calmodulin and RPB2 sequences, thereby supplying a verified set of sequences for each species of the genus. In addition to the nomenclatural list, we recommend a standard working method for species descriptions and identifications to be adopted by laboratories working on this genus.

Entities:  

Keywords:  Aspergillaceae; Fungal identification; media; nomenclature; phylogeny

Year:  2014        PMID: 25505353      PMCID: PMC4261876          DOI: 10.1016/j.simyco.2014.09.001

Source DB:  PubMed          Journal:  Stud Mycol        ISSN: 0166-0616            Impact factor:   16.097


  83 in total

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Journal:  J Proteomics       Date:  2012-04-04       Impact factor: 4.044

Review 4.  The use of secondary metabolite profiling in chemotaxonomy of filamentous fungi.

Authors:  Jens C Frisvad; Birgitte Andersen; Ulf Thrane
Journal:  Mycol Res       Date:  2007-09-01

5.  Diversity of Penicillium section Citrina within the fynbos biome of South Africa, including a new species from a Protea repens infructescence.

Authors:  Cobus M Visagie; Keith A Seifert; Jos Houbraken; Robert A Samson; Karin Jacobs
Journal:  Mycologia       Date:  2014-05-28       Impact factor: 2.696

6.  Effect of environmental conditions on sclerotia and cleistothecia production in Aspergillus.

Authors:  J N Rai; J P Tewari; A K Sinha
Journal:  Mycopathol Mycol Appl       Date:  1967-04-28

7.  Atpenins, new antifungal antibiotics produced by Penicillium sp. Production, isolation, physico-chemical and biological properties.

Authors:  S Omura; H Tomoda; K Kimura; D Z Zhen; H Kumagai; K Igarashi; N Imamura; Y Takahashi; Y Tanaka; Y Iwai
Journal:  J Antibiot (Tokyo)       Date:  1988-12       Impact factor: 2.649

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Authors:  Amanda Juan Chen; Dan Tang; Ying Qun Zhou; Bing Da Sun; Xiao Jin Li; Li Zhi Wang; Wei Wei Gao
Journal:  PLoS One       Date:  2013-10-21       Impact factor: 3.240

9.  Accurate dereplication of bioactive secondary metabolites from marine-derived fungi by UHPLC-DAD-QTOFMS and a MS/HRMS library.

Authors:  Sara Kildgaard; Maria Mansson; Ina Dosen; Andreas Klitgaard; Jens C Frisvad; Thomas O Larsen; Kristian F Nielsen
Journal:  Mar Drugs       Date:  2014-06-20       Impact factor: 5.118

10.  β-tubulin paralogue tubC is frequently misidentified as the benA gene in Aspergillus section Nigri taxonomy: primer specificity testing and taxonomic consequences.

Authors:  V Hubka; M Kolarik
Journal:  Persoonia       Date:  2012-10-09       Impact factor: 11.051

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  148 in total

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Authors:  Nancy P Keller
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2.  Phylogeny, identification and nomenclature of the genus Aspergillus.

Authors:  R A Samson; C M Visagie; J Houbraken; S-B Hong; V Hubka; C H W Klaassen; G Perrone; K A Seifert; A Susca; J B Tanney; J Varga; S Kocsubé; G Szigeti; T Yaguchi; J C Frisvad
Journal:  Stud Mycol       Date:  2014-06       Impact factor: 16.097

3.  A taxonomic and phylogenetic revision of Penicillium section Aspergilloides.

Authors:  J Houbraken; C M Visagie; M Meijer; J C Frisvad; P E Busby; J I Pitt; K A Seifert; G Louis-Seize; R Demirel; N Yilmaz; K Jacobs; M Christensen; R A Samson
Journal:  Stud Mycol       Date:  2014-06       Impact factor: 16.097

4.  New record and enzyme activity of four species in Penicillium section Citrina from marine environments in Korea.

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Review 5.  Online Databases for Taxonomy and Identification of Pathogenic Fungi and Proposal for a Cloud-Based Dynamic Data Network Platform.

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Journal:  J Clin Microbiol       Date:  2017-02-08       Impact factor: 5.948

6.  Indoor airborne fungal pollution in newborn units in Turkey.

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8.  Polyphasic taxonomy of Aspergillus section Aspergillus (formerly Eurotium), and its occurrence in indoor environments and food.

Authors:  A J Chen; V Hubka; J C Frisvad; C M Visagie; J Houbraken; M Meijer; J Varga; R Demirel; Ž Jurjević; A Kubátová; F Sklenář; Y G Zhou; R A Samson
Journal:  Stud Mycol       Date:  2017-07-12       Impact factor: 16.097

9.  Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world.

Authors:  C M Visagie; Y Hirooka; J B Tanney; E Whitfield; K Mwange; M Meijer; A S Amend; K A Seifert; R A Samson
Journal:  Stud Mycol       Date:  2014-06       Impact factor: 16.097

10.  Molecular analysis of Aspergillus section Nigri isolated from onion samples reveals the prevalence of A. welwitschiae.

Authors:  Fernanda Pelisson Massi; Beatriz Thie Iamanaka; Rafaella Liviero Barbosa; Daniele Sartori; Larissa Ferrranti; Marta Hiromi Taniwaki; Maria Helena Pelegrinelli Fungaro
Journal:  Braz J Microbiol       Date:  2020-10-22       Impact factor: 2.476

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