| Literature DB >> 25504078 |
Lindsay Y King1, Kara B Johnson1, Hui Zheng2, Lan Wei3, Thomas Gudewicz4, Yujin Hoshida5, Kathleen E Corey1, Tokunbo Ajayi6, Nneka Ufere7, Thomas F Baumert8, Andrew T Chan1, Kenneth K Tanabe3, Bryan C Fuchs3, Raymond T Chung1.
Abstract
Single nucleotide polymorphisms (SNPs) in the epidermal growth factor (EGF, rs4444903), patatin-like phospholipase domain-containing protein 3 (PNPLA3, rs738409) genes, and near the interleukin-28B (IL28B, rs12979860) gene are linked to treatment response, fibrosis, and hepatocellular carcinoma (HCC) in chronic hepatitis C. Whether these SNPs independently or in combination predict clinical deterioration in hepatitis C virus (HCV)-related cirrhosis is unknown. We genotyped SNPs in EGF, PNPLA3, and IL28B from liver tissue from 169 patients with biopsy-proven HCV cirrhosis. We estimated risk of clinical deterioration, defined as development of ascites, encephalopathy, variceal hemorrhage, HCC, or liver-related death using Cox proportional hazards modeling. During a median follow-up of 6.6 years, 66 of 169 patients experienced clinical deterioration. EGF non-AA, PNPLA3 non-CC, and IL28B non-CC genotypes were each associated with increased risk of clinical deterioration in age, sex, and race-adjusted analysis. Only EGF non-AA genotype was independently associated with increased risk of clinical deterioration (hazard ratio [HR] 2.87; 95% confidence interval [CI] 1.31-6.25) after additionally adjusting for bilirubin, albumin, and platelets. Compared to subjects who had 0-1 unfavorable genotypes, the HR for clinical deterioration was 1.79 (95%CI 0.96-3.35) for 2 unfavorable genotypes and 4.03 (95%CI 2.13-7.62) for unfavorable genotypes for all three loci (Ptrend<0.0001). In conclusion, among HCV cirrhotics, EGF non-AA genotype is independently associated with increased risk for clinical deterioration. Specific PNPLA3 and IL28B genotypes also appear to be associated with clinical deterioration. These SNPs have potential to identify patients with HCV-related cirrhosis who require more intensive monitoring for decompensation or future therapies preventing disease progression.Entities:
Mesh:
Year: 2014 PMID: 25504078 PMCID: PMC4264769 DOI: 10.1371/journal.pone.0114747
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow chart for identification of the cohort.
The following keywords were used in the pathology database search: HCV, HBV, NAFLD, NASH, and hepatitis. HCV: hepatitis C virus; HBV: hepatitis B virus; HIV: human immunodeficiency virus; HCC: hepatocellular carcinoma; FFPE: formalin-fixed, paraffin-embedded;
Baseline Characteristics of all patients and stratified by genotype.
| Entire cohort |
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| Number | 169 | 45 | 82/42 | 66 | 75/28 | 102 | 51/16 |
| Age, years | 50.1(9.3) | 51.6(7.6) | 49.6(9.8) | 51.2(9.8) | 49.4(8.6) | 50.4(8.8) | 49.6(10.1) |
| Male, % | 74 | 69 | 76 | 68 | 78 | 72 | 78 |
| Race | |||||||
| White, % | 84 | 89 | 82 | 91 | 80 | 85 | 82 |
| Black, % | 5 | 4 | 6 | 2 | 8 | 8 | 2 |
| Hispanic,% | 7 | 2 | 8 | 3 | 9 | 2 | 13 |
| Other, % | 4 | 4 | 4 | 4 | 4 | 5 | 3 |
| Ever smoker, % | 63 | 53 | 67 | 56 | 68 | 65 | 61 |
| History of heavy alcohol use, % | 51 | 53 | 51 | 42 | 57 | 52 | 51 |
| Diabetes Mellitus, % | 13 | 9 | 15 | 6 | 17 | 13 | 13 |
| HCV RNA >500,000, IU/mL, % | 47 | 53 | 44 | 53 | 43 | 45 | 49 |
| Genotype 1, % | 63 | 64 | 62 | 55 | 68 | 58 | 70 |
| AST, U/L | 115.3(73.8) | 110.8(88.1) | 117.0(67.8) | 103.4(64.6) | 122.5(78.2) | 106.3(59.1) | 128.7(90.4) |
| ALT, U/L | 139.4(113.0) | 134.1(111.0) | 131.5(114.1) | 142.4(118.6) | 137.6(109.9) | 129.1(98.5) | 154.8(130.7) |
| Albumin, g/dL | 3.8(0.5) | 3.8(0.4) | 3.8(0.6) | 3.9(0.5) | 3.7(0.5) | 3.8(0.5) | 3.7(0.5) |
| Creatinine, mg/dL | 0.9(0.5) | 1.0(0.8) | 0.9(0.2) | 0.9(0.2) | 0.9(0.5) | 1.0(0.6) | 0.9(0.2) |
| Total Bilirubin, mg/dL | 0.9(1.1) | 0.7(0.4) | 0.9(1.2) | 0.66(0.3) | 1.0(1.3) | 0.9(1.3) | 0.8(0.5) |
| Platelets ×1000/mm3 | 152.4(59.4) | 170.0(49.5) | 145.8(61.7) | 161.3(59.8) | 146.6(58.8) | 156.1(60.8) | 146.5(57.1) |
Continuous Variables are presented as mean (SD).
EGF: Epidermal Growth Factor; IL28B: interleukin-28B; PNPLA3: patatin-like phospholipase domain-containing protein 3; HCV: hepatitis C virus; AST: aspartate aminotransferase; ALT: alanine aminotransferase.
Cox proportional Hazards Model for Clinical Deterioration.
| Genotype | Cases/Person-Years | Age, sex, race- Adjusted Hazard Ratio (95%CI) | P value | Multivariable Adjusted Hazard Ratio | P value |
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| 9/390 | 1.00 | 1.00 | ||
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| 57/812 | 3.20 (1.57–6.52) | 0.001 | 2.87 (1.31–6.25) | 0.008 |
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| 19/506 | 1.00 | 1.00 | ||
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| 47/697 | 1.78 (1.03–3.06) | 0.04 | 1.38 (0.71–2.68) | 0.34 |
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| 32/752 | 1.00 | 1.00 | ||
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| 34/451 | 1.79 (1.10–2.90) | 0.02 | 1.45 (0.85–2.47) | 0.17 |
*Adjusted for age, sex, race, and baseline total bilirubin, albumin, and platelets.
EGF: Epidermal Growth Factor; IL28B: interleukin-28B; PNPLA3: patatin-like phospholipase domain-containing protein 3; CI: confidence interval.
Figure 2Kaplan-Meier analysis of clinical deterioration by genotype.
A. Kaplan-Meier analysis of the time to first episode of ascites, variceal hemorrhage, hepatic encephalopathy, hepatocellular carcinoma, or liver-related death stratified by EGF genotype. B. Kaplan-Meier analysis of time to first episode of ascites, variceal hemorrhage, hepatic encephalopathy, hepatocellular carcinoma, or liver-related death stratified by IL28B genotype. C. Kaplan-Meier analysis of time to first episode of ascites, variceal hemorrhage, hepatic encephalopathy, hepatocellular carcinoma, or liver-related death stratified by PNPLA3 genotype. EGF: Epidermal Growth Factor; IL28B: Interleukin-28B; PNPLA3: patatin-like phospholipase domain-containing protein 3.
Combined genotype model.
| Genotypes | Cases/Person-Years | Age, sex, race-Adjusted Hazard Ratio (95%CI) | P value |
| 0/1 unfavorable genotypes | 18/569 | 1.00 | |
| 2 unfavorable genotypes | 23/424 | 1.79 (0.96–3.35) | 0.07 |
| 3 unfavorable genotypes | 25/209 | 4.03 (2.13–7.62) | <0.0001 |
*Plinear trend<0.0001.
unfavorable genotypes include EGF non-AA, IL28B non-CC, and PNPLA3 non-CC.
EGF: Epidermal Growth Factor; IL28B: interleukin-28B; PNPLA3: patatin-like phospholipase domain-containing protein 3; CI: confidence interval.