| Literature DB >> 22403631 |
Jian-Hong Zhong1, Xue-Mei You, Wen-Feng Gong, Liang Ma, Yu Zhang, Qin-Guo Mo, Liu-Cheng Wu, Jun Xiao, Le-Qun Li.
Abstract
BACKGROUND: Hepatocarcinogenesis is a complex process that may be influenced by many factors, including polymorphism in the epidermal growth factor (EGF) gene. Previous work suggests an association between the EGF 61*A/G polymorphism (rs4444903) and susceptibility to hepatocellular carcinoma (HCC), but the results have been inconsistent. Therefore, we performed a meta-analysis of several studies covering a large population to address this controversy.Entities:
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Year: 2012 PMID: 22403631 PMCID: PMC3293888 DOI: 10.1371/journal.pone.0032159
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Flow chart of study selection.
EGF, epidermal growth factor; HCC, hepatocellular carcinoma.
Main characteristics of all studies included in the meta-analysis.
| Study | Ethnicity | Genotyping method | Source of control | PHWE | Frequency of G allele | Cases/Controls | No. of cases | No. of controls | ||||
| GG | GA | AA | GG | GA | AA | |||||||
| Tanabe 2008a16 | Mixed | PCR-RFLP | HB | 0.19 | 0.001 | 59/148 | 23 | 27 | 9 | 32 | 65 | 51 |
| Tanabe 2008b16 | Caucasian | PCR-RFLP | HB | 0.99 | 0.04 | 44/77 | 15 | 17 | 12 | 12 | 37 | 28 |
| Abu 201117 | Mixed | allele-specific PCR | HB | 0.08 | 0.08 | 66/750 | 24 | 25 | 17 | 180 | 350 | 220 |
| Chen 201118 | Chinese-Han | PCR-RFLP | HB and PB | 0.56 | 0.11 | 120/240 | 62 | 51 | 7 | 106 | 110 | 24 |
| Li 200919 | Chinese-Han | PCR-RFLP | HB and PB | 0.94 | 0.12 | 186/338 | 96 | 82 | 8 | 161 | 145 | 32 |
| Qi 200920 | Chinese-Han | PCR-RFLP | HB and PB | 0.75 | 0.55 | 215/380 | 102 | 98 | 15 | 182 | 160 | 38 |
| Wang 2009a21 | Chinese | PCR-RFLP | HB | 0.37 | 0.06 | 397/480 | 200 | 163 | 34 | 209 | 222 | 49 |
| Wang 2009b21 | Chinese-Han | PCR-RFLP | HB | 0.53 | 0.06 | 217/200 | 125 | 76 | 16 | 94 | 89 | 17 |
Abbreviations: PCR-RFLP, polymerase chain reaction-restriction fragment length polymorphism; PB, population-based; HB, hospital-based; PHWE, Hardy-Weinberg equilibrium of controls.
Included multiple ethnicities in China.
Figure 2Forest plots describing the association of EGF polymorphism 61*A/G with hepatocellular carcinoma.
(a) ORs were calculated by comparing the G/G genotype with the G/A+A/A genotypes. (b) ORs were calculated by comparing the A/A genotype with the G/A+G/G genotypes.
Figure 3Begg's funnel plots to examine publication bias for reported comparisons of the EGF polymorphism 61*A/G.
Plots are shown with pseudo 95% confidence limits. S.E., standard error.
Publication bias tests for comparisons involving the EGF 61*A/G polymorphism.
| Genetic comparison | Coefficient | Standard error | t | P value | 95% CI of intercept |
| G-allele vs. A-allele | 3.073 | 0.985 | 3.12 | 0.021 | 0.662 to 5.484 |
| G/G vs. A/A | 3.110 | 0.981 | 3.17 | 0.019 | 0.710 to 5.511 |
| G/G+G/A vs. A/A | −2.766 | 1.199 | −2.31 | 0.061 | −5.700 to 0.168 |
| G/G vs. G/A+A/A | 2.889 | 0.954 | 3.03 | 0.023 | 0.554 to 5.224 |
Odds ratios and 95% confidence intervals reported for the association between hepatocellular carcinoma and EGF 61*A/G genotype.
| Study | Genotype comparison | |||
| G-allele vs. A-allele | G/G vs. A/A | G/G vs. G/A+A/A | A/A vs. G/G+G/A | |
| Tanabe 2008a16 | 2.10 (1.36–3.25) | 4.07 (1.68–9.90) | 2.32 (1.20–4.45) | 0.34 (0.16–0.75) |
| Tanabe 2008b16 | 1.75 (1.03–2.97) | 2.92 (1.06–8.06) | 2.80 (1.17–6.73) | 0.66 (0.29–1.47) |
| Abu 201117 | 1.38 (0.96–1.97) | 1.73 (0.90–3.31) | 1.81 (1.07–3.07) | 0.84 (0.47–1.48) |
| Chen 201118 | 1.32 (0.94–1.86) | 2.01 (0.82–4.92) | 1.35 (0.87–2.10) | 0.56 (0.23–1.33) |
| Li 200919 | 1.25 (0.94–1.66) | 2.39 (1.06–5.39) | 1.17 (0.82–1.68) | 0.43 (0.19–0.95) |
| Qi 200920 | 1.06 (0.82–1.37) | 1.42 (0.74–2.71) | 0.98 (0.70–1.37) | 0.68 (0.36–1.26) |
| Wang 2009a21 | 1.22 (0.99–1.49) | 1.38 (0.85–2.23) | 1.32 (1.01–1.72) | 0.82 (0.52–1.30) |
| Wang 2009b21 | 1.34 (0.99–1.82) | 1.41 (0.68–2.94) | 1.53 (1.04–2.26) | 0.86 (0.42–1.75) |