Literature DB >> 25500388

Variability in growth/no growth boundaries of 188 different Escherichia coli strains reveals that approximately 75% have a higher growth probability under low pH conditions than E. coli O157:H7 strain ATCC 43888.

L U Haberbeck1, R C Oliveira2, B Vivijs3, T Wenseleers2, A Aertsen3, C Michiels3, A H Geeraerd4.   

Abstract

This study investigated the variation in growth/no growth boundaries of 188 Escherichia coli strains. Experiments were conducted in Luria-Bertani media under 36 combinations of lactic acid (LA) (0 and 25 mM), pH (3.8, 3.9, 4.0, 4.1, 4.2 and 4.3 for 0 mM LA and 4.3, 4.4, 4.5, 4.6, 4.7 and 4.8 for 25 mM LA) and temperature (20, 25 and 30 °C). After 3 days of incubation, growth was monitored through optical density measurements. For each strain, a so-called purposeful selection approach was used to fit a logistic regression model that adequately predicted the likelihood for growth. Further, to assess the growth/no growth variability for all the strains at once, a generalized linear mixed model was fitted to the data. Strain was fitted as a fixed factor and replicate as a random blocking factor. E. coli O157:H7 strain ATCC 43888 was used as reference strain allowing a comparison with the other strains. Out of the 188 strains tested, 140 strains (∼75%) presented a significantly higher probability of growth under low pH conditions than the O157:H7 strain ATCC 43888, whereas 20 strains (∼11%) showed a significantly lower probability of growth under high pH conditions.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Escherichia coli; Generalized linear mixed model; Growth/no growth boundary; Logistic regression; Strains variability

Mesh:

Year:  2014        PMID: 25500388     DOI: 10.1016/j.fm.2014.06.024

Source DB:  PubMed          Journal:  Food Microbiol        ISSN: 0740-0020            Impact factor:   5.516


  4 in total

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Authors:  Mattika Abhisingha; Jureeporn Dumnil; Chetsadaporn Pitaksutheepong
Journal:  Probiotics Antimicrob Proteins       Date:  2018-06       Impact factor: 4.609

2.  Identification of Genes Required for Growth of Escherichia coli MG1655 at Moderately Low pH.

Authors:  Bram Vivijs; Abram Aertsen; Chris W Michiels
Journal:  Front Microbiol       Date:  2016-10-25       Impact factor: 5.640

3.  Validation of Selective Agars for Detection and Quantification of Escherichia coli Strains Resistant to Critically Important Antimicrobials.

Authors:  Sam Abraham; David Jordan; Zheng Z Lee; Rebecca Abraham; Mark O'Dea; Ali Harb; Kelly Hunt; Terence Lee
Journal:  Microbiol Spectr       Date:  2021-11-10

4.  Growth of Mycobacterium tuberculosis at acidic pH depends on lipid assimilation and is accompanied by reduced GAPDH activity.

Authors:  Alexandre Gouzy; Claire Healy; Katherine A Black; Kyu Y Rhee; Sabine Ehrt
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-10       Impact factor: 11.205

  4 in total

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