Literature DB >> 25494299

Biochemical Properties and Biological Functions of FET Proteins.

Jacob C Schwartz1, Thomas R Cech, Roy R Parker.   

Abstract

Members of the FET protein family, consisting of FUS, EWSR1, and TAF15, bind to RNA and contribute to the control of transcription, RNA processing, and the cytoplasmic fates of messenger RNAs in metazoa. FET proteins can also bind DNA, which may be important in transcription and DNA damage responses. FET proteins are of medical interest because chromosomal rearrangements of their genes promote various sarcomas and because point mutations in FUS or TAF15 can cause neurodegenerative diseases such as amyotrophic lateral sclerosis and frontotemporal lobar dementia. Recent results suggest that both the normal and pathological effects of FET proteins are modulated by low-complexity or prion-like domains, which can form higher-order assemblies with novel interaction properties. Herein, we review FET proteins with an emphasis on how the biochemical properties of FET proteins may relate to their biological functions and to pathogenesis.

Entities:  

Keywords:  EWSR1; FUS; RNA-binding; TAF15; low-complexity; neurodegeneration

Mesh:

Substances:

Year:  2014        PMID: 25494299      PMCID: PMC9188303          DOI: 10.1146/annurev-biochem-060614-034325

Source DB:  PubMed          Journal:  Annu Rev Biochem        ISSN: 0066-4154            Impact factor:   27.258


  151 in total

1.  Oncogenic TLS/ERG and EWS/Fli-1 fusion proteins inhibit RNA splicing mediated by YB-1 protein.

Authors:  H A Chansky; M Hu; D D Hickstein; L Yang
Journal:  Cancer Res       Date:  2001-05-01       Impact factor: 12.701

2.  Structural and energetic basis of ALS-causing mutations in the atypical proline-tyrosine nuclear localization signal of the Fused in Sarcoma protein (FUS).

Authors:  Zi Chao Zhang; Yuh Min Chook
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-09       Impact factor: 11.205

Review 3.  The tip of the iceberg: RNA-binding proteins with prion-like domains in neurodegenerative disease.

Authors:  Oliver D King; Aaron D Gitler; James Shorter
Journal:  Brain Res       Date:  2012-01-21       Impact factor: 3.252

4.  Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA.

Authors:  J Ding; M K Hayashi; Y Zhang; L Manche; A R Krainer; R M Xu
Journal:  Genes Dev       Date:  1999-05-01       Impact factor: 11.361

5.  Identification and characterization of FUS/TLS as a new target of ATM.

Authors:  Mary Gardiner; Rachel Toth; Franck Vandermoere; Nicholas A Morrice; John Rouse
Journal:  Biochem J       Date:  2008-10-15       Impact factor: 3.857

6.  Recurrent rearrangement of the Ewing's sarcoma gene, EWSR1, or its homologue, TAF15, with the transcription factor CIZ/NMP4 in acute leukemia.

Authors:  Alessandra Martini; Roberta La Starza; Hilde Janssen; Chrystèle Bilhou-Nabera; Anniek Corveleyn; Riet Somers; Ana Aventin; Robin Foà; Anne Hagemeijer; Christina Mecucci; Peter Marynen
Journal:  Cancer Res       Date:  2002-10-01       Impact factor: 12.701

7.  Identification of hnRNP P2 as TLS/FUS using electrospray mass spectrometry.

Authors:  C Calvio; G Neubauer; M Mann; A I Lamond
Journal:  RNA       Date:  1995-09       Impact factor: 4.942

8.  FUS and TARDBP but not SOD1 interact in genetic models of amyotrophic lateral sclerosis.

Authors:  Edor Kabashi; Valérie Bercier; Alexandra Lissouba; Meijiang Liao; Edna Brustein; Guy A Rouleau; Pierre Drapeau
Journal:  PLoS Genet       Date:  2011-08-04       Impact factor: 5.917

9.  Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription.

Authors:  Xiangting Wang; Shigeki Arai; Xiaoyuan Song; Donna Reichart; Kun Du; Gabriel Pascual; Paul Tempst; Michael G Rosenfeld; Christopher K Glass; Riki Kurokawa
Journal:  Nature       Date:  2008-05-28       Impact factor: 49.962

10.  The unfolded protein response signals through high-order assembly of Ire1.

Authors:  Alexei V Korennykh; Pascal F Egea; Andrei A Korostelev; Janet Finer-Moore; Chao Zhang; Kevan M Shokat; Robert M Stroud; Peter Walter
Journal:  Nature       Date:  2008-12-14       Impact factor: 49.962

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  71 in total

1.  Sequence, Structure, and Context Preferences of Human RNA Binding Proteins.

Authors:  Daniel Dominguez; Peter Freese; Maria S Alexis; Amanda Su; Myles Hochman; Tsultrim Palden; Cassandra Bazile; Nicole J Lambert; Eric L Van Nostrand; Gabriel A Pratt; Gene W Yeo; Brenton R Graveley; Christopher B Burge
Journal:  Mol Cell       Date:  2018-06-07       Impact factor: 17.970

2.  Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets.

Authors:  Yongdae Shin; Joel Berry; Nicole Pannucci; Mikko P Haataja; Jared E Toettcher; Clifford P Brangwynne
Journal:  Cell       Date:  2016-12-29       Impact factor: 41.582

3.  FUS functions in coupling transcription to splicing by mediating an interaction between RNAP II and U1 snRNP.

Authors:  Yong Yu; Robin Reed
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-29       Impact factor: 11.205

4.  Role of TAF15b in transcriptional regulation of autonomous pathway for flowering.

Authors:  H Eom; I Lee
Journal:  Plant Signal Behav       Date:  2018-06-26

Review 5.  Fused in Sarcoma Neuropathology in Neurodegenerative Disease.

Authors:  Ian R A Mackenzie; Manuela Neumann
Journal:  Cold Spring Harb Perspect Med       Date:  2017-12-01       Impact factor: 6.915

Review 6.  Structure-specific nucleic acid recognition by L-motifs and their diverse roles in expression and regulation of the genome.

Authors:  Roopa Thapar
Journal:  Biochim Biophys Acta       Date:  2015-03-04

7.  Loci-specific phase separation of FET fusion oncoproteins promotes gene transcription.

Authors:  Linyu Zuo; Guanwei Zhang; Matthew Massett; Jun Cheng; Zicong Guo; Liang Wang; Yifei Gao; Ru Li; Xu Huang; Pilong Li; Zhi Qi
Journal:  Nat Commun       Date:  2021-03-05       Impact factor: 14.919

8.  Splicing Activation by Rbfox Requires Self-Aggregation through Its Tyrosine-Rich Domain.

Authors:  Yi Ying; Xiao-Jun Wang; Celine K Vuong; Chia-Ho Lin; Andrey Damianov; Douglas L Black
Journal:  Cell       Date:  2017-07-13       Impact factor: 41.582

Review 9.  mRNP assembly, axonal transport, and local translation in neurodegenerative diseases.

Authors:  Bilal Khalil; Dmytro Morderer; Phillip L Price; Feilin Liu; Wilfried Rossoll
Journal:  Brain Res       Date:  2018-02-17       Impact factor: 3.252

Review 10.  Faulty RNA splicing: consequences and therapeutic opportunities in brain and muscle disorders.

Authors:  Vittoria Pagliarini; Piergiorgio La Rosa; Claudio Sette
Journal:  Hum Genet       Date:  2017-04-22       Impact factor: 4.132

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