Literature DB >> 25485487

Enhancer RNAs.

Wenbo Li1, Michael T Y Lam, Dimple Notani.   

Abstract

Keywords:  enhancer; enhancer RNA (eRNA); epigenetics; long non-coding RNAs (lncRNAs); transcription

Mesh：

Substances：

Year:  2014        PMID： 25485487      PMCID： PMC4613994          DOI： 10.4161/15384101.2014.962860

Source DB:  PubMed          Journal:  Cell Cycle        ISSN： 1551-4005            Impact factor:   4.534


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  8 in total

1.  eRNAs promote transcription by establishing chromatin accessibility at defined genomic loci.

Authors:  Kambiz Mousavi; Hossein Zare; Stefania Dell'orso; Lars Grontved; Gustavo Gutierrez-Cruz; Assia Derfoul; Gordon L Hager; Vittorio Sartorelli
Journal:  Mol Cell       Date:  2013-08-29       Impact factor: 17.970

2.  eRNAs are required for p53-dependent enhancer activity and gene transcription.

Authors:  Carlos A Melo; Jarno Drost; Patrick J Wijchers; Harmen van de Werken; Elzo de Wit; Joachim A F Oude Vrielink; Ran Elkon; Sónia A Melo; Nicolas Léveillé; Raghu Kalluri; Wouter de Laat; Reuven Agami
Journal:  Mol Cell       Date:  2012-12-27       Impact factor: 17.970

3.  Enhancer RNAs participate in androgen receptor-driven looping that selectively enhances gene activation.

Authors:  Chen-Lin Hsieh; Teng Fei; Yiwen Chen; Tiantian Li; Yanfei Gao; Xiaodong Wang; Tong Sun; Christopher J Sweeney; Gwo-Shu Mary Lee; Shaoyong Chen; Steven P Balk; Xiaole Shirley Liu; Myles Brown; Philip W Kantoff
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-28       Impact factor: 11.205

4.  An atlas of active enhancers across human cell types and tissues.

Authors:  Robin Andersson; Claudia Gebhard; Michael Rehli; Albin Sandelin; Irene Miguel-Escalada; Ilka Hoof; Jette Bornholdt; Mette Boyd; Yun Chen; Xiaobei Zhao; Christian Schmidl; Takahiro Suzuki; Evgenia Ntini; Erik Arner; Eivind Valen; Kang Li; Lucia Schwarzfischer; Dagmar Glatz; Johanna Raithel; Berit Lilje; Nicolas Rapin; Frederik Otzen Bagger; Mette Jørgensen; Peter Refsing Andersen; Nicolas Bertin; Owen Rackham; A Maxwell Burroughs; J Kenneth Baillie; Yuri Ishizu; Yuri Shimizu; Erina Furuhata; Shiori Maeda; Yutaka Negishi; Christopher J Mungall; Terrence F Meehan; Timo Lassmann; Masayoshi Itoh; Hideya Kawaji; Naoto Kondo; Jun Kawai; Andreas Lennartsson; Carsten O Daub; Peter Heutink; David A Hume; Torben Heick Jensen; Harukazu Suzuki; Yoshihide Hayashizaki; Ferenc Müller; Alistair R R Forrest; Piero Carninci
Journal:  Nature       Date:  2014-03-27       Impact factor: 49.962

5.  Widespread transcription at neuronal activity-regulated enhancers.

Authors:  Tae-Kyung Kim; Martin Hemberg; Jesse M Gray; Allen M Costa; Daniel M Bear; Jing Wu; David A Harmin; Mike Laptewicz; Kellie Barbara-Haley; Scott Kuersten; Eirene Markenscoff-Papadimitriou; Dietmar Kuhl; Haruhiko Bito; Paul F Worley; Gabriel Kreiman; Michael E Greenberg
Journal:  Nature       Date:  2010-04-14       Impact factor: 49.962

6.  Functional roles of enhancer RNAs for oestrogen-dependent transcriptional activation.

Authors:  Wenbo Li; Dimple Notani; Qi Ma; Bogdan Tanasa; Esperanza Nunez; Aaron Yun Chen; Daria Merkurjev; Jie Zhang; Kenneth Ohgi; Xiaoyuan Song; Soohwan Oh; Hong-Sook Kim; Christopher K Glass; Michael G Rosenfeld
Journal:  Nature       Date:  2013-06-02       Impact factor: 49.962

7.  Enhancer transcripts mark active estrogen receptor binding sites.

Authors:  Nasun Hah; Shino Murakami; Anusha Nagari; Charles G Danko; W Lee Kraus
Journal:  Genome Res       Date:  2013-05-01       Impact factor: 9.043

8.  Rev-Erbs repress macrophage gene expression by inhibiting enhancer-directed transcription.

Authors:  Michael T Y Lam; Han Cho; Hanna P Lesch; David Gosselin; Sven Heinz; Yumiko Tanaka-Oishi; Christopher Benner; Minna U Kaikkonen; Aneeza S Kim; Mika Kosaka; Cindy Y Lee; Andy Watt; Tamar R Grossman; Michael G Rosenfeld; Ronald M Evans; Christopher K Glass
Journal:  Nature       Date:  2013-06-02       Impact factor: 49.962
  8 in total
  9 in total

1.  Unraveling the mechanisms of chromatin fibril packaging.

Authors:  Alexey A Gavrilov; Yuri Y Shevelyov; Sergey V Ulianov; Ekaterina E Khrameeva; Pavel Kos; Alexander Chertovich; Sergey V Razin
Journal:  Nucleus       Date:  2016-05-03       Impact factor: 4.197

Review 2.  The Determinants of Directionality in Transcriptional Initiation.

Authors:  Dia N Bagchi; Vishwanath R Iyer
Journal:  Trends Genet       Date:  2016-04-07       Impact factor: 11.639

3.  Epigenetic plasticity of enhancers in cancer.

Authors:  Jie Yao; Ji Chen; Lian-Yun Li; Min Wu
Journal:  Transcription       Date:  2020-01-16

Review 4.  The emerging role of the sympathetic nervous system in skeletal muscle motor innervation and sarcopenia.

Authors:  Osvaldo Delbono; Anna Carolina Zaia Rodrigues; Henry Jacob Bonilla; Maria Laura Messi
Journal:  Ageing Res Rev       Date:  2021-02-18       Impact factor: 10.895

5.  Enhancer RNA-driven looping enhances the transcription of the long noncoding RNA DHRS4-AS1, a controller of the DHRS4 gene cluster.

Authors:  Yingying Yang; Zhongjing Su; Xuhong Song; Bin Liang; Fanxing Zeng; Xiaolan Chang; Dongyang Huang
Journal:  Sci Rep       Date:  2016-02-11       Impact factor: 4.379

6.  Efficient chromosomal-scale DNA looping in Escherichia coli using multiple DNA-looping elements.

Authors:  Nan Hao; Kim Sneppen; Keith E Shearwin; Ian B Dodd
Journal:  Nucleic Acids Res       Date:  2017-05-19       Impact factor: 16.971

Review 7.  Transcriptional and Post-transcriptional Gene Regulation by Long Non-coding RNA.

Authors:  Iain M Dykes; Costanza Emanueli
Journal:  Genomics Proteomics Bioinformatics       Date:  2017-05-19       Impact factor: 7.691

8.  The enhancer RNA lnc-SLC4A1-1 epigenetically regulates unexplained recurrent pregnancy loss (URPL) by activating CXCL8 and NF-kB pathway.

Authors:  Zhenyao Huang; Guizhen Du; Xiaomin Huang; Li Han; Xiumei Han; Bo Xu; Yan Zhang; Mingming Yu; Yufeng Qin; Yankai Xia; Xinru Wang; Chuncheng Lu
Journal:  EBioMedicine       Date:  2018-11-16       Impact factor: 8.143

9.  Long ncRNA A-ROD activates its target gene DKK1 at its release from chromatin.

Authors:  Evgenia Ntini; Annita Louloupi; Julia Liz; Jose M Muino; Annalisa Marsico; Ulf Andersson Vang Ørom
Journal:  Nat Commun       Date:  2018-04-24       Impact factor: 14.919
  9 in total

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