Literature DB >> 25484801

Crystal structure of 4-methyl-N-{[1-(4-methyl-benzo-yl)piperidin-4-yl]meth-yl}benzamide.

K Prathebha1, D Reuben Jonathan2, S Sathya1, R Vasanthi1, G Usha1.   

Abstract

In the title compound, C22H27N2O2, the piperidine ring adopts a half-chair conformation with the benzene rings inclined in a trans orientation with respect to the piperidine ring [dihedral angle between the benzene rings = 89.1 (1)°]. In the crystal, a three-centre asymmetric N-H⋯O/C-H⋯O hydrogen-bonding inter-action leads to the formation of chains extending along the a-axis direction.

Entities:  

Keywords:  benzamide; biological activity; crystal structure; hydrogen bonding; piperdine derivatives

Year:  2014        PMID: 25484801      PMCID: PMC4257237          DOI: 10.1107/S1600536814021965

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of the title compound, see: Prathebha et al. (2013 ▶, 2014 ▶). For the biological activity of piperdine derivatives, see: Prostakov & Gaivoronskaya (1978 ▶); O’Hagan (2000 ▶); Pinder (1992 ▶). For related structures, see: Prathebha et al. (2014 ▶); Luo et al. (2011 ▶).

Experimental

Crystal data

C22H26N2O2 M = 350.45 Orthorhombic, a = 15.3749 (6) Å b = 13.1575 (5) Å c = 19.2929 (9) Å V = 3902.9 (3) Å3 Z = 8 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.20 × 0.15 × 0.10 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.975, T max = 0.998 26551 measured reflections 4831 independent reflections 1847 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.060 wR(F 2) = 0.172 S = 0.93 4831 reflections 235 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.22 e Å−3

Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S1600536814021965/zs2314sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814021965/zs2314Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814021965/zs2314Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814021965/zs2314fig1.tif The mol­ecular structure of the title compound showing atom numbering, with displacement ellipsoids drawn at the 30% probability level. Click here for additional data file. . DOI: 10.1107/S1600536814021965/zs2314fig2.tif The packing of the mol­ecules in the crystal structure. Unassociated H-atoms are omitted and dashed lines indicate the hydrogen bonds. Click here for additional data file. . DOI: 10.1107/S1600536814021965/zs2314fig3.tif Experimental procedure CCDC reference: 1027556 Additional supporting information: crystallographic information; 3D view; checkCIF report
C22H26N2O2F(000) = 1504
Mr = 350.45Dx = 1.193 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 4831 reflections
a = 15.3749 (6) Åθ = 2.3–28.3°
b = 13.1575 (5) ŵ = 0.08 mm1
c = 19.2929 (9) ÅT = 293 K
V = 3902.9 (3) Å3Block, colourless
Z = 80.20 × 0.15 × 0.10 mm
Bruker Kappa APEXII CCD diffractometer4831 independent reflections
Radiation source: fine-focus sealed tube1847 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.051
ω and φ scanθmax = 28.3°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2004)h = −17→20
Tmin = 0.975, Tmax = 0.998k = −17→12
26551 measured reflectionsl = −12→25
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.060Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.172H-atom parameters constrained
S = 0.93w = 1/[σ2(Fo2) + (0.0588P)2 + 1.589P] where P = (Fo2 + 2Fc2)/3
4831 reflections(Δ/σ)max < 0.001
235 parametersΔρmax = 0.18 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C220.6965 (2)−0.4676 (2)0.47887 (18)0.0948 (10)
H22A0.7516−0.43770.49020.114*
H22B0.7033−0.51220.43990.114*
H22C0.6753−0.50550.51790.114*
N10.24058 (14)0.06231 (14)0.21465 (13)0.0678 (7)
C1−0.00836 (15)0.31788 (17)0.17840 (14)0.0539 (7)
C20.03275 (17)0.28524 (18)0.11916 (15)0.0634 (7)
H20.02160.31830.07750.076*
C30.08988 (16)0.20487 (19)0.12001 (15)0.0631 (7)
H30.11580.18350.07900.076*
C40.10897 (14)0.15576 (17)0.18134 (14)0.0504 (6)
C50.06856 (16)0.18834 (19)0.24129 (14)0.0566 (7)
H50.08090.15630.28310.068*
C60.01028 (15)0.26771 (18)0.23982 (14)0.0571 (7)
H6−0.01700.28800.28060.069*
C7−0.07222 (18)0.4045 (2)0.17671 (17)0.0831 (9)
H7A−0.09430.41630.22250.100*
H7B−0.11950.38780.14620.100*
H7C−0.04360.46470.16030.100*
C80.16482 (16)0.0623 (2)0.18032 (15)0.0582 (7)
C90.29448 (18)−0.0291 (2)0.21712 (17)0.0756 (9)
H9A0.3451−0.01990.18780.091*
H9B0.2616−0.08650.19950.091*
C100.32335 (16)−0.05074 (18)0.29030 (15)0.0653 (8)
H10A0.3618−0.10920.29040.078*
H10B0.2730−0.06720.31840.078*
C110.37020 (15)0.03968 (18)0.32161 (15)0.0595 (7)
H110.42150.05350.29300.071*
C120.31090 (17)0.13214 (18)0.31724 (16)0.0704 (8)
H12A0.26020.12110.34630.084*
H12B0.34150.19120.33480.084*
C130.28185 (17)0.15248 (19)0.24409 (17)0.0758 (9)
H13A0.24100.20870.24370.091*
H13B0.33160.17140.21600.091*
C140.40150 (18)0.0214 (2)0.39565 (15)0.0701 (8)
H14A0.42870.08310.41260.084*
H14B0.35140.00760.42470.084*
C150.43907 (18)−0.1546 (2)0.42462 (14)0.0650 (7)
C160.50989 (17)−0.2317 (2)0.43383 (13)0.0596 (7)
C170.48785 (18)−0.3334 (2)0.42988 (14)0.0682 (8)
H170.4311−0.35160.41860.082*
C180.5486 (2)−0.4082 (2)0.44237 (15)0.0724 (8)
H180.5324−0.47600.43810.087*
C190.63257 (19)−0.3850 (2)0.46102 (14)0.0695 (8)
C200.65476 (19)−0.2835 (2)0.46459 (16)0.0776 (9)
H200.7112−0.26560.47700.093*
C210.59503 (18)−0.2076 (2)0.45019 (14)0.0688 (8)
H210.6123−0.13990.45150.083*
N20.46281 (13)−0.06195 (16)0.40288 (12)0.0649 (6)
H2A0.5165−0.05140.39280.078*
O10.13858 (11)−0.01377 (14)0.14932 (11)0.0784 (6)
O20.36348 (13)−0.17709 (15)0.43739 (12)0.0903 (7)
U11U22U33U12U13U23
C220.094 (2)0.103 (2)0.088 (3)0.014 (2)−0.0037 (19)0.0161 (19)
N10.0524 (13)0.0512 (13)0.0998 (19)0.0038 (11)−0.0208 (13)−0.0054 (12)
C10.0500 (15)0.0491 (14)0.0626 (19)0.0003 (12)−0.0012 (13)−0.0051 (13)
C20.0760 (19)0.0608 (16)0.0534 (18)0.0120 (15)−0.0029 (14)0.0044 (13)
C30.0696 (18)0.0681 (17)0.0518 (18)0.0097 (15)0.0032 (13)−0.0024 (14)
C40.0442 (14)0.0494 (14)0.0575 (17)−0.0011 (11)−0.0046 (12)−0.0013 (13)
C50.0592 (17)0.0620 (16)0.0486 (17)−0.0039 (14)−0.0040 (13)0.0010 (13)
C60.0566 (16)0.0605 (16)0.0543 (18)−0.0043 (14)0.0087 (13)−0.0079 (13)
C70.079 (2)0.0688 (18)0.102 (3)0.0132 (16)0.0057 (17)−0.0044 (17)
C80.0517 (16)0.0571 (17)0.0659 (19)−0.0026 (13)−0.0026 (14)−0.0014 (14)
C90.0630 (18)0.0685 (18)0.095 (3)0.0176 (15)−0.0140 (16)−0.0107 (17)
C100.0535 (16)0.0542 (16)0.088 (2)0.0099 (13)−0.0041 (15)−0.0025 (15)
C110.0425 (14)0.0619 (16)0.074 (2)−0.0021 (13)0.0008 (13)0.0039 (14)
C120.0559 (16)0.0542 (16)0.101 (3)−0.0060 (13)−0.0106 (16)−0.0082 (15)
C130.0550 (17)0.0574 (17)0.115 (3)−0.0053 (14)−0.0228 (16)0.0050 (17)
C140.0614 (17)0.0717 (18)0.077 (2)−0.0026 (15)0.0065 (15)−0.0039 (15)
C150.0598 (19)0.080 (2)0.0554 (18)−0.0082 (16)0.0033 (14)0.0081 (15)
C160.0611 (18)0.0724 (19)0.0451 (16)−0.0070 (15)−0.0011 (12)0.0101 (13)
C170.0668 (18)0.082 (2)0.0558 (19)−0.0141 (17)−0.0077 (14)0.0083 (15)
C180.084 (2)0.0709 (19)0.062 (2)−0.0063 (18)−0.0051 (15)0.0078 (15)
C190.070 (2)0.083 (2)0.0557 (19)0.0009 (17)0.0004 (14)0.0113 (15)
C200.0625 (19)0.091 (2)0.079 (2)−0.0083 (18)−0.0071 (15)0.0125 (18)
C210.0663 (19)0.0714 (18)0.069 (2)−0.0080 (16)−0.0049 (15)0.0095 (15)
N20.0518 (13)0.0738 (15)0.0691 (17)−0.0011 (12)0.0025 (11)0.0105 (12)
O10.0663 (12)0.0677 (12)0.1013 (17)0.0074 (10)−0.0196 (11)−0.0242 (11)
O20.0584 (13)0.1027 (15)0.1098 (18)−0.0099 (11)0.0146 (11)0.0269 (13)
C22—C191.505 (4)C10—H10A0.9700
C22—H22A0.9600C10—H10B0.9700
C22—H22B0.9600C11—C121.523 (3)
C22—H22C0.9600C11—C141.526 (4)
N1—C81.340 (3)C11—H110.9800
N1—C131.460 (3)C12—C131.504 (4)
N1—C91.461 (3)C12—H12A0.9700
C1—C21.375 (3)C12—H12B0.9700
C1—C61.386 (3)C13—H13A0.9700
C1—C71.505 (3)C13—H13B0.9700
C2—C31.375 (3)C14—N21.452 (3)
C2—H20.9300C14—H14A0.9700
C3—C41.380 (3)C14—H14B0.9700
C3—H30.9300C15—O21.224 (3)
C4—C51.381 (3)C15—N21.340 (3)
C4—C81.500 (3)C15—C161.499 (4)
C5—C61.376 (3)C16—C171.382 (3)
C5—H50.9300C16—C211.383 (3)
C6—H60.9300C17—C181.379 (4)
C7—H7A0.9600C17—H170.9300
C7—H7B0.9600C18—C191.374 (4)
C7—H7C0.9600C18—H180.9300
C8—O11.233 (3)C19—C201.381 (4)
C9—C101.507 (4)C20—C211.384 (4)
C9—H9A0.9700C20—H200.9300
C9—H9B0.9700C21—H210.9300
C10—C111.516 (3)N2—H2A0.8600
C19—C22—H22A109.5C10—C11—C12108.7 (2)
C19—C22—H22B109.5C10—C11—C14113.5 (2)
H22A—C22—H22B109.5C12—C11—C14111.5 (2)
C19—C22—H22C109.5C10—C11—H11107.6
H22A—C22—H22C109.5C12—C11—H11107.6
H22B—C22—H22C109.5C14—C11—H11107.6
C8—N1—C13124.8 (2)C13—C12—C11111.8 (2)
C8—N1—C9120.6 (2)C13—C12—H12A109.2
C13—N1—C9114.2 (2)C11—C12—H12A109.2
C2—C1—C6117.8 (2)C13—C12—H12B109.2
C2—C1—C7121.2 (2)C11—C12—H12B109.2
C6—C1—C7120.9 (2)H12A—C12—H12B107.9
C1—C2—C3121.6 (2)N1—C13—C12110.4 (2)
C1—C2—H2119.2N1—C13—H13A109.6
C3—C2—H2119.2C12—C13—H13A109.6
C2—C3—C4120.4 (2)N1—C13—H13B109.6
C2—C3—H3119.8C12—C13—H13B109.6
C4—C3—H3119.8H13A—C13—H13B108.1
C3—C4—C5118.5 (2)N2—C14—C11114.4 (2)
C3—C4—C8119.6 (2)N2—C14—H14A108.7
C5—C4—C8121.5 (2)C11—C14—H14A108.7
C6—C5—C4120.7 (2)N2—C14—H14B108.7
C6—C5—H5119.6C11—C14—H14B108.7
C4—C5—H5119.6H14A—C14—H14B107.6
C5—C6—C1120.9 (2)O2—C15—N2122.8 (3)
C5—C6—H6119.6O2—C15—C16120.2 (3)
C1—C6—H6119.6N2—C15—C16117.1 (2)
C1—C7—H7A109.5C17—C16—C21117.8 (3)
C1—C7—H7B109.5C17—C16—C15118.1 (2)
H7A—C7—H7B109.5C21—C16—C15124.0 (3)
C1—C7—H7C109.5C16—C17—C18121.0 (3)
H7A—C7—H7C109.5C16—C17—H17119.5
H7B—C7—H7C109.5C18—C17—H17119.5
O1—C8—N1121.6 (2)C19—C18—C17121.6 (3)
O1—C8—C4119.0 (2)C19—C18—H18119.2
N1—C8—C4119.4 (2)C17—C18—H18119.2
N1—C9—C10110.7 (2)C18—C19—C20117.4 (3)
N1—C9—H9A109.5C18—C19—C22120.9 (3)
C10—C9—H9A109.5C20—C19—C22121.7 (3)
N1—C9—H9B109.5C19—C20—C21121.6 (3)
C10—C9—H9B109.5C19—C20—H20119.2
H9A—C9—H9B108.1C21—C20—H20119.2
C9—C10—C11111.4 (2)C16—C21—C20120.5 (3)
C9—C10—H10A109.4C16—C21—H21119.7
C11—C10—H10A109.4C20—C21—H21119.7
C9—C10—H10B109.4C15—N2—C14122.7 (2)
C11—C10—H10B109.4C15—N2—H2A118.7
H10A—C10—H10B108.0C14—N2—H2A118.7
C6—C1—C2—C30.7 (4)C14—C11—C12—C13178.4 (2)
C7—C1—C2—C3−178.7 (2)C8—N1—C13—C12132.7 (3)
C1—C2—C3—C4−1.4 (4)C9—N1—C13—C12−55.1 (3)
C2—C3—C4—C50.8 (4)C11—C12—C13—N155.1 (3)
C2—C3—C4—C8174.3 (2)C10—C11—C14—N260.6 (3)
C3—C4—C5—C60.3 (3)C12—C11—C14—N2−176.3 (2)
C8—C4—C5—C6−173.0 (2)O2—C15—C16—C1725.0 (4)
C4—C5—C6—C1−1.0 (3)N2—C15—C16—C17−155.7 (2)
C2—C1—C6—C50.5 (3)O2—C15—C16—C21−151.0 (3)
C7—C1—C6—C5179.9 (2)N2—C15—C16—C2128.4 (4)
C13—N1—C8—O1170.9 (3)C21—C16—C17—C180.5 (4)
C9—N1—C8—O1−0.8 (4)C15—C16—C17—C18−175.7 (2)
C13—N1—C8—C4−11.1 (4)C16—C17—C18—C191.8 (4)
C9—N1—C8—C4177.3 (2)C17—C18—C19—C20−2.1 (4)
C3—C4—C8—O1−63.0 (3)C17—C18—C19—C22176.1 (3)
C5—C4—C8—O1110.2 (3)C18—C19—C20—C210.2 (4)
C3—C4—C8—N1118.9 (3)C22—C19—C20—C21−178.0 (3)
C5—C4—C8—N1−67.9 (3)C17—C16—C21—C20−2.4 (4)
C8—N1—C9—C10−132.0 (3)C15—C16—C21—C20173.6 (3)
C13—N1—C9—C1055.5 (3)C19—C20—C21—C162.1 (4)
N1—C9—C10—C11−55.6 (3)O2—C15—N2—C142.9 (4)
C9—C10—C11—C1255.8 (3)C16—C15—N2—C14−176.4 (2)
C9—C10—C11—C14−179.5 (2)C11—C14—N2—C15−99.6 (3)
C10—C11—C12—C13−55.8 (3)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O1i0.862.102.953 (3)169
C21—H21···O1i0.932.593.262 (3)130
C9—H9B···O10.972.332.738 (3)104
C14—H14B···O20.972.452.794 (3)100
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
N2H2AO1i 0.862.102.953(3)169
C21H21O1i 0.932.593.262(3)130

Symmetry code: (i) .

  5 in total

Review 1.  Pyrrole, pyrrolidine, pyridine, piperidine and tropane alkaloids.

Authors:  D O'Hagan
Journal:  Nat Prod Rep       Date:  2000-10       Impact factor: 13.423

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  (2-Chloro-3,5-dinitro-phen-yl)(piperidin-1-yl)methanone.

Authors:  Xun Luo; Yun-Chuang Huang; Chao Gao; Luo-Ting Yu
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-07

4.  2-Chloro-1-(3,3-dimethyl-2,6-di-phenyl-piperidin-1-yl)ethanone.

Authors:  K Prathebha; B K Revathi; G Usha; S Ponnuswamy; S Abdul Basheer
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-14

5.  N-[(1-Benzoyl-piperidin-4-yl)meth-yl]benzamide.

Authors:  K Prathebha; D Reuben Jonathan; Sathya Shanmugam; G Usha
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-06-14
  5 in total

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