Literature DB >> 25482360

Pool-BCGA: a parallelised generation-free genetic algorithm for the ab initio global optimisation of nanoalloy clusters.

A Shayeghi1, D Götz, J B A Davis, R Schäfer, R L Johnston.   

Abstract

The Birmingham cluster genetic algorithm is a package that performs global optimisations for homo- and bimetallic clusters based on either first principles methods or empirical potentials. Here, we present a new parallel implementation of the code which employs a pool strategy in order to eliminate sequential steps and significantly improve performance. The new approach meets all requirements of an evolutionary algorithm and contains the main features of the previous implementation. The performance of the pool genetic algorithm is tested using the Gupta potential for the global optimisation of the Au10Pd10 cluster, which demonstrates the high efficiency of the method. The new implementation is also used for the global optimisation of the Au10 and Au20 clusters directly at the density functional theory level.

Year:  2014        PMID: 25482360     DOI: 10.1039/c4cp04323e

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  6 in total

Review 1.  A global optimization perspective on molecular clusters.

Authors:  J M C Marques; F B Pereira; J L Llanio-Trujillo; P E Abreu; M Albertí; A Aguilar; F Pirani; M Bartolomei
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-04-28       Impact factor: 4.226

2.  A review on genetic algorithm: past, present, and future.

Authors:  Sourabh Katoch; Sumit Singh Chauhan; Vijay Kumar
Journal:  Multimed Tools Appl       Date:  2020-10-31       Impact factor: 2.757

3.  Phoenics: A Bayesian Optimizer for Chemistry.

Authors:  Florian Häse; Loïc M Roch; Christoph Kreisbeck; Alán Aspuru-Guzik
Journal:  ACS Cent Sci       Date:  2018-08-24       Impact factor: 14.553

4.  A Global Optimizer for Nanoclusters.

Authors:  Maya Khatun; Rajat Shubhro Majumdar; Anakuthil Anoop
Journal:  Front Chem       Date:  2019-09-27       Impact factor: 5.221

5.  Editorial: Application of Optimization Algorithms in Chemistry.

Authors:  Jorge M C Marques; Emilio Martínez-Núñez; William L Hase
Journal:  Front Chem       Date:  2020-03-20       Impact factor: 5.221

6.  Stabilization of golden cages by encapsulation of a single transition metal atom.

Authors:  Hui-Fang Li; Huai-Qian Wang
Journal:  R Soc Open Sci       Date:  2018-01-03       Impact factor: 2.963

  6 in total

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