Literature DB >> 2548088

High-resolution footprints of the DNA-binding domain of Epstein-Barr virus nuclear antigen 1.

A S Kimball1, G Milman, T D Tullius.   

Abstract

The DNA-binding domain of Epstein-Barr virus nuclear antigen 1 was found by hydroxyl radical footprinting to protect backbone positions on one side of its DNA-binding site. The guanines contacted in the major groove by the DNA-binding domain of Epstein-Barr virus nuclear antigen 1 were identified by methylation protection. No difference was found in the interaction of the DNA-binding domain of Epstein-Barr virus nuclear antigen 1 with tandemly repeated and overlapping binding sites.

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Year:  1989        PMID： 2548088      PMCID： PMC362348          DOI： 10.1128/mcb.9.6.2738-2742.1989

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN： 0270-7306            Impact factor:   4.272


  16 in total

1.  Sequence-specific recognition of double helical nucleic acids by proteins.

Authors:  N C Seeman; J M Rosenberg; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  1976-03       Impact factor: 11.205

2.  Hydroxyl radical "footprinting": high-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein.

Authors:  T D Tullius; B A Dombroski
Journal:  Proc Natl Acad Sci U S A       Date:  1986-08       Impact factor: 11.205

3.  A putative origin of replication of plasmids derived from Epstein-Barr virus is composed of two cis-acting components.

Authors:  D Reisman; J Yates; B Sugden
Journal:  Mol Cell Biol       Date:  1985-08       Impact factor: 4.272

4.  trans activation of an Epstein-Barr viral transcriptional enhancer by the Epstein-Barr viral nuclear antigen 1.

Authors:  D Reisman; B Sugden
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

5.  Structure of the lambda complex at 2.5 A resolution: details of the repressor-operator interactions.

Authors:  S R Jordan; C O Pabo
Journal:  Science       Date:  1988-11-11       Impact factor: 47.728

6.  A cis-acting element from the Epstein-Barr viral genome that permits stable replication of recombinant plasmids in latently infected cells.

Authors:  J Yates; N Warren; D Reisman; B Sugden
Journal:  Proc Natl Acad Sci U S A       Date:  1984-06       Impact factor: 11.205

7.  Stable replication of plasmids derived from Epstein-Barr virus in various mammalian cells.

Authors:  J L Yates; N Warren; B Sugden
Journal:  Nature       Date:  1985 Feb 28-Mar 6       Impact factor: 49.962

8.  Carboxyl-terminal domain of the Epstein-Barr virus nuclear antigen is highly immunogenic in man.

Authors:  G Milman; A L Scott; M S Cho; S C Hartman; D K Ades; G S Hayward; P F Ki; J T August; S D Hayward
Journal:  Proc Natl Acad Sci U S A       Date:  1985-09       Impact factor: 11.205

9.  Multiple specific contacts between a mammalian transcription factor and its cognate promoters.

Authors:  D Gidoni; W S Dynan; R Tjian
Journal:  Nature       Date:  1984 Nov 29-Dec 5       Impact factor: 49.962

10.  Sequence-specific DNA binding of the Epstein-Barr virus nuclear antigen (EBNA-1) to clustered sites in the plasmid maintenance region.

Authors:  D R Rawlins; G Milman; S D Hayward; G S Hayward
Journal:  Cell       Date:  1985-10       Impact factor: 41.582
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  11 in total

1.  Strong minor groove base conservation in sequence logos implies DNA distortion or base flipping during replication and transcription initiation.

Authors:  T D Schneider
Journal:  Nucleic Acids Res       Date:  2001-12-01       Impact factor: 16.971

2.  EBNA1 distorts oriP, the Epstein-Barr virus latent replication origin.

Authors:  L Frappier; M O'Donnell
Journal:  J Virol       Date:  1992-03       Impact factor: 5.103

3.  Binding of EBNA-1 to DNA creates a protease-resistant domain that encompasses the DNA recognition and dimerization functions.

Authors:  W A Shah; R F Ambinder; G S Hayward; S D Hayward
Journal:  J Virol       Date:  1992-06       Impact factor: 5.103

4.  Functional domains of Epstein-Barr virus nuclear antigen EBNA-1.

Authors:  R F Ambinder; M A Mullen; Y N Chang; G S Hayward; S D Hayward
Journal:  J Virol       Date:  1991-03       Impact factor: 5.103

5.  EBNA1 can link the enhancer element to the initiator element of the Epstein-Barr virus plasmid origin of DNA replication.

Authors:  T Middleton; B Sugden
Journal:  J Virol       Date:  1992-01       Impact factor: 5.103

6.  Interaction of Epstein-Barr virus nuclear antigen 1 with the viral latent origin of replication.

Authors:  J Hearing; Y Mülhaupt; S Harper
Journal:  J Virol       Date:  1992-02       Impact factor: 5.103

7.  Definition of the sequence requirements for binding of the EBNA-1 protein to its palindromic target sites in Epstein-Barr virus DNA.

Authors:  R F Ambinder; W A Shah; D R Rawlins; G S Hayward; S D Hayward
Journal:  J Virol       Date:  1990-05       Impact factor: 5.103

8.  Separation of the complex DNA binding domain of EBNA-1 into DNA recognition and dimerization subdomains of novel structure.

Authors:  M R Chen; J M Middeldorp; S D Hayward
Journal:  J Virol       Date:  1993-08       Impact factor: 5.103

9.  Plasmid maintenance of derivatives of oriP of Epstein-Barr virus.

Authors:  A L Kirchmaier; B Sugden
Journal:  J Virol       Date:  1995-02       Impact factor: 5.103

10.  Sequence requirements of the Epstein-Barr virus latent origin of DNA replication.

Authors:  S Harrison; K Fisenne; J Hearing
Journal:  J Virol       Date:  1994-03       Impact factor: 5.103
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