Literature DB >> 2547651

Two early genes of bacteriophage T5 encode proteins containing an NTP-binding sequence motif and probably involved in DNA replication, recombination and repair.

V M Blinov1, E V Koonin, A E Gorbalenya, A V Kaliman, V M Kryukov.   

Abstract

It is demonstrated, by computer-assisted analysis, that T5 bacteriophage early genes D10 and D13 encode proteins containing the purine NTP-binding sequence motif. The D10 gene product is shown to be a member of a recently characterized superfamily of (putative) DNA and RNA helicases. The D13 gene product is related at a statistically significant level, to the gene 46 product of bacteriophage T4 which is a component of an exonuclease involved in phage DNA replication, recombination and repair. A lower but also significant degree of sequence similarity was detected between the gene D12 product of T5 and the gene 47 product of T4, the second component of the same nuclease. It is hypothesized that both D10 and D13 gene products of T5 might be NTPases, possibly DNA-dependent, mediating NTP-consuming steps during phage DNA replication, recombination and/or repair.

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Year:  1989        PMID: 2547651     DOI: 10.1016/0014-5793(89)80887-7

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  5 in total

Review 1.  Viral proteins containing the purine NTP-binding sequence pattern.

Authors:  A E Gorbalenya; E V Koonin
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

2.  Conserved sequence pattern in a wide variety of phosphoesterases.

Authors:  E V Koonin
Journal:  Protein Sci       Date:  1994-02       Impact factor: 6.725

Review 3.  MRE11/RAD50/NBS1: complex activities.

Authors:  Nora Assenmacher; Karl-Peter Hopfner
Journal:  Chromosoma       Date:  2004-08-10       Impact factor: 4.316

4.  The SbcCD protein of Escherichia coli is related to two putative nucleases in the UvrA superfamily of nucleotide-binding proteins.

Authors:  D R Leach; R G Lloyd; A F Coulson
Journal:  Genetica       Date:  1992       Impact factor: 1.082

5.  The DNA sequence of Chilo iridescent virus between the genome coordinates 0.101 and 0.391; similarities in coding strategy between insect and vertebrate iridoviruses.

Authors:  U Bahr; C A Tidona; G Darai
Journal:  Virus Genes       Date:  1997       Impact factor: 2.198

  5 in total

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