| Literature DB >> 25473475 |
Anthony P Walker1, Andrew P Beckerman2, Lianhong Gu3, Jens Kattge4, Lucas A Cernusak5, Tomas F Domingues6, Joanna C Scales7, Georg Wohlfahrt8, Stan D Wullschleger3, F Ian Woodward2.
Abstract
Great uncertainty exists in the global exchange ofEntities:
Keywords: Carbon assimilation; DGVM; Farquhar model; TBM; carbon cycle; carboxylation; electron transport; land surface model; meta-analysis; mixed-effect multiple regression; noncarbon photosynthesis
Year: 2014 PMID: 25473475 PMCID: PMC4222209 DOI: 10.1002/ece3.1173
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
Sources of data collected for the meta-analysis and associated information including location, number of species and any experimental treatment
| Reference | Number of species | PFT | Longitude (°E) | Latitude (°N) | Elevation (m) | Location | Country | Experiment | N | P |
|---|---|---|---|---|---|---|---|---|---|---|
| Aranda et al. (2005) | 1 | Temp Ev Bl | −3.43 | 39.23 | 650 | Alburquerque | Spain | Light | Y | N |
| Bauer et al. ( | 6 | Temp Dc Bl and Ev Nl | −71.03 | 42.21 | 40 | Havard forest | USA | CO2 | Y | N |
| Bown et al. ( | 1 | Temp Ev Nl | 176.13 | −38.26 | 600 | Purokohukohu Experimental Basin | NZ | N | Y | Y |
| Brück and Guo ( | 1 | Temp legume crop | 10.08 | 54.19 | 40 | Kiel | Germany | NH4 vs. NO3 | Y | N |
| 1 | Temp Dc Bl | 11.48 | 42.22 | 150 | Viterbo | Italy | CO2 | Y | N | |
| Carswell et al. ( | 4 | Temp Dc Bl and Ev Nl | 170.3 | −43.2 | 90 | Okarito | NZ | N | Y | Y |
| Cernusak et al. ( | 2 | Trop Ev Bl | 139.56 | −22.59 | 150 | Boulia | Australia | None | Y | Y |
| Cernusak et al. ( | 2 | “ | 133.19 | −17.07 | 230 | Sturt plains | Australia | None | Y | Y |
| Cernusak et al. ( | 2 | “ | 132.22 | −15.15 | 170 | Dry creek | Australia | None | Y | Y |
| Cernusak et al. ( | 2 | “ | 131.23 | −14.09 | 70 | Daly river | Australia | None | Y | Y |
| Cernusak et al. ( | 2 | “ | 131.07 | −13.04 | 80 | Adelaide river | Australia | None | Y | Y |
| Cernusak et al. ( | 2 | “ | 131.08 | −12.29 | 40 | Howard springs | Australia | None | Y | Y |
| 2 | Sub-trop forb | 113.17 | 23.08 | 10 | Guanzhou | China | None | Y | N | |
| Domingues et al. ( | 3 | Trop Dc Bl | −1.5 | 15.34 | 280–300 | Hombori | Mali | None | Y | Y |
| Domingues et al. ( | 7 | “ | −1.17 | 12.73 | 250 | Bissiga | Burkina Faso | None | Y | Y |
| Domingues et al. ( | 8 | “ | −3.15 | 10.94 | 300 | Dano | Burkina Faso | None | Y | Y |
| Domingues et al. ( | 5 | “ | −1.86 | 9.3 | 370 | Mole | Ghana | None | Y | Y |
| Domingues et al. ( | 8 | “ | −1.18 | 7.3 | 170 | Kogye | Ghana | None | Y | Y |
| Domingues et al. ( | 21 | Trop Dc Bl and Ev Bl | −1.7 | 7.72 | 200 | Boabeng Fiame | Ghana | None | Y | Y |
| Domingues et al. ( | 4 | “ | −2.45 | 7.14 | 25 | Asukese | Ghana | None | Y | Y |
| 1 | Sub-trop Ev Bl | 149.07 | −35.18 | 600 | Canberra | Australia | N | Y | N | |
| Han et al. ( | 1 | Temp Ev Nl | 138.8 | 35.45 | 1030 | Canberra | Australia | N | Y | N |
| Katahata et al. ( | 1 | Ev shrub | 138.4 | 36.51 | 900 | Niigata | Japan | Light | Y | N |
| Kubiske ( | 2 | Temp Bl Dc | −84.04 | 45.33 | 215 | Pellston | USA | N | Y | N |
| Manter ( | 1 | Temp Ev Nl | −122.4 | 45.31 | 75 | Portland | USA | N | Y | N |
| Merilo et al. ( | 2 | Temp Ev Nl | 26.55 | 58.42 | 65 | Saare | Estonia | Light | Y | N |
| Midgley et al. ( | 4 | Temp Ev shrub | 20 | −34.5 | 120 | Cape Agulhas | SA | CO2 | Y | N |
| Porte and Lousteau ( | 1 | Temp Ev Nl | −0.46 | 44.42 | 60 | Bordeaux | France | Leaf age | Y | Y |
| Rodriguez-Calcerrada et al. ( | 2 | Temp Dc Bl | −3.3 | 41.07 | 50 | Madrid | Spain | Light | Y | N |
| 1 | Temp Dc Bl | −84.2 | 35.54 | 230 | Oak Ridge | USA | CO2 | Y | N | |
| Tissue et al. ( | 3 | Temp Ev Nl and Bl Dc | 170.3 | −43.2 | 50 | Okarito forest south Westland | NZ | Canopy level | Y | Y |
| Turnbull et al. ( | 1 | Temp Ev Bl | 142.05 | −37.03 | 470 | Ballarat | Australia | Defoliation | Y | Y |
| Warren ( | 1 | Temp Ev Bl | 143.53 | −37.25 | 450 | Creswick | Australia | N | Y | N |
| Watanabe et al. ( | 1 | Temp Dc Nl | 141 | 43 | 180 | Asapporo | Japan | CO2 | Y | Y |
| Wohlfahrt et al. ( | 28 | Temp C3 grass and forb | 11.01 | 46.01 | 1540–1900 | Monte Bondone | Estern Alps | None | Y | N |
| Zhang and Dang ( | 1 | Temp Dc Bl | 89.14 | 48.22 | 200 | Ontario | Canada | CO2 | N | Y |
| Additional datasets | ||||||||||
| TRY – Kattge et al. ( | 1048 | |||||||||
| Wullschleger ( | 110 | |||||||||
PFT abbreviations: Temp, temperate; Trop, tropical; Ev, evergreen; Dc, deciduous; Nl, needleleaf tree; Bl, broadleaf tree.
Details of the recommended minimum adequate models (MAM) explaining Vcmax and Jmax. All traits were expressed on an area basis and were natural-log-transformed. The LRT was the likelihood ratio test statistic of the model against the null (intercept only) model, and the residual variance reduction was the proportional reduction in residual variance when compared to the null model. A colon represents the interaction between two variables. Using the example of model 1, the equation describing Vcmax would take the form: ln(Vcmax) = 1.993 + 2.555ln(N) − 0.372ln(SLA) + 0.422ln(N)ln(SLA)
| Response trait | Explanatory traits of the maximal model | Explanatory variables of the MAM | Coefficient | SE | df | Student's | N obs | N groups | Residual variance reduction (%) | LRT | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Model 1 | N, P | Intercept | 3.946 | 0.229 | 99 | 17.26 | <0.001 | 110 | 8 | 19.5 | 25.5 | <0.001 | |
| N | 0.921 | 0.301 | 99 | 3.06 | 0.003 | ||||||||
| P | 0.121 | 0.085 | 99 | 1.42 | 0.156 | ||||||||
| N:P | 0.282 | 0.145 | 99 | 1.95 | 0.054 | ||||||||
| Model 2 | N, SLA | Intercept | 1.993 | 0.410 | 237 | 4.86 | <0.001 | 260 | 20 | 36.6 | 99.1 | <0.001 | |
| N | 2.555 | 0.522 | 237 | 4.89 | <0.001 | ||||||||
| SLA | -0.372 | 0.093 | 237 | -4.00 | <0.001 | ||||||||
| N:SLA | 0.422 | 0.115 | 237 | 3.67 | <0.001 | ||||||||
| Model 3 | Intercept | 1.246 | 0.233 | 96 | 5.33 | <0.001 | 105 | 7 | 83.5 | 189.1 | <0.001 | ||
| 0.886 | 0.043 | 96 | 20.60 | <0.001 | |||||||||
| P | 0.089 | 0.041 | 96 | 2.20 | 0.033 | ||||||||
| Model 4 | Intercept | 1.197 | 0.115 | 215 | 10.45 | <0.001 | 235 | 17 | 84.2 | 416.1 | <0.001 | ||
| 0.847 | 0.025 | 215 | 34.23 | <0.001 |
Including all combinations of interactions between each trait.
Model selection table for multiple regressions of Vcmax and Jmax regressed against leaf N, or leaf N and Vcmax respectively, and in combination with either leaf P or SLA. The minimum adequate model (MAM) was the model with the lowest AICc. All traits were expressed on a leaf area basis and were natural-log-transformed
| Response trait | Model | Model explanatory variables | Residual variance reduction (%) | AICc |
|---|---|---|---|---|
| Maximal model, MAM – Model 1 | N, P, N:P | 19.5 | 44.2 | |
| N, P | 16.6 | 45.8 | ||
| N | 13.5 | 47.7 | ||
| P | 6.5 | 56.9 | ||
| Maximal model, MAM – Model 2 | N, SLA, N:SLA | 36.6 | 174.6 | |
| N, SLA | 32.5 | 185.7 | ||
| N | 30.2 | 187.8 | ||
| SLA | 12.3 | 248.4 | ||
| Maximal model | 83.6 | −115.6 | ||
| 83.6 | −117.9 | |||
| 83.4 | −118.9 | |||
| 83.4 | −120.1 | |||
| 83.4 | −121.4 | |||
| MAM – Model 3 | 83.5 | −123.2 | ||
| 83.5 | −121.2 | |||
| 82.9 | −120.8 | |||
| N | 10.4 | 49.3 | ||
| P | 12.5 | 46.2 | ||
| Maximal model | 85.1 | −196.2 | ||
| 84.7 | −193.7 | |||
| 84.7 | −195.3 | |||
| 84.6 | −194.5 | |||
| 84.5 | −196.4 | |||
| 84.3 | −196.4 | |||
| MAM – Model 4 | 84.2 | −196.0 | ||
| 84.2 | −193.0 | |||
| 84.2 | −194.0 |
All models include an intercept term.
Figure 1The derived relationships between Vcmax and leaf nitrogen (Table 3), as modified by leaf P (A – Table 3, model 1) and SLA (B – Table 3, model 2).
Figure 2The relationship between Jmax and Vcmax as modified by leaf P (Table 3, model 3).
Slope coefficients from linear regressions of log-transformed Jmax on Vcmax from the data collected in this study, from the TRY database and from Wullschleger (1993). The data collected in this study were analyzed using a mixed-effects model with the author as the random effect, while data from the other two studies were analyzed using a fixed-effects model
| Model term | Coefficient | SE | Reduction in residual variance (%) | |||
|---|---|---|---|---|---|---|
| This study | 301 | Intercept | 1.010 | 0.097 | 86.7 | <0.001 |
| Slope | 0.890 | 0.021 | ||||
| TRY/Kattge | 1048 | Intercept | 1.668 | 0.048 | 78.9 | <0.001 |
| Slope | 0.750 | 0.012 | ||||
| Wullschleger | 110 | Intercept | 1.425 | 0.128 | 87.2 | <0.001 |
| Slope | 0.837 | 0.031 |
For this study's dataset, the P-value is based on the LRT statistic, and for Kattge and Wullschleger, it is based on the F statistic.
Figure 3The relationship between Jmax and Vcmax collected in this study (black circles and solid line) and compared against the regressions based on the Kattge et al. (2009) dataset (dotted line) and the Wullschleger (1993) dataset (dashed line). Log-scaled axes.
Figure 4Simulated variation in gross carboxylation light-response curves as a result of variation in leaf P (A–B) or SLA (C–D) used in the minimum adequate models presented in Table 3. Light responses were simulated at two levels of leaf N, 0.5 gm−2 (A & C) and 3 gm−2 (B & D).
Figure 5Simulated light-response curves of W and W in response to bjv variation (A–C), using a and b calculated from the dataset compiled in this study (D–F) and using a and b calculated from the dataset of Kattge et al. (2009) (G–I). All curves calculated at three levels of Vcmax 25 (A, D & G), 50 (B, E & H), and 90 (C, F, & I) μmol·m−2·s−1. On panels D–I, the black line within the gray-shaded area represents W using the calculated coefficients and the gray-shaded area 95% confidence interval of W.