Literature DB >> 25471538

Determination of oligomeric states of peptide complexes using thermal unfolding curves.

Martin Rabe1, Aimee Boyle, Harshal R Zope, Frank Versluis, Alexander Kros.   

Abstract

In their native form peptides are often found as oligomeric complexes, meaning they consist of more than one peptide chain. Coiled coils and helical bundles are common examples of such complexes. Their oligomeric state needs to be known precisely as this tremendously influences their biochemical and biophysical properties. The extensive analysis of circular dichroism spectroscopic data is commonly used to investigate the thermodynamics of binding and folding of these complexes. Here we present FitDis! an easy-to-use programme, which fits the most common two-state unfolding transition to the measured thermal unfolding curves of any oligomer of any stoichiometry. We demonstrate, with simulated and real examples, that the comparison of different stoichiometric models fitted to the same dataset reveals the oligomeric states of these complexes along with detailed thermodynamic information. This method will significantly ease the analysis of and increase the amount of information gained from, the thermal unfolding curves of peptide complexes.
© 2015 Wiley Periodicals, Inc.

Entities:  

Keywords:  CD-spectroscopy; coiled coil; oligomeric state; thermal unfolding

Mesh:

Substances:

Year:  2015        PMID: 25471538     DOI: 10.1002/bip.22598

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  4 in total

1.  A Coiled-Coil Peptide Shaping Lipid Bilayers upon Fusion.

Authors:  Martin Rabe; Christopher Aisenbrey; Kristyna Pluhackova; Vincent de Wert; Aimee L Boyle; Didjay F Bruggeman; Sonja A Kirsch; Rainer A Böckmann; Alexander Kros; Jan Raap; Burkhard Bechinger
Journal:  Biophys J       Date:  2016-11-15       Impact factor: 4.033

2.  Coiled-coil formation of the membrane-fusion K/E peptides viewed by electron paramagnetic resonance.

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Journal:  PLoS One       Date:  2018-01-19       Impact factor: 3.240

3.  Kinetic studies on strand displacement in de novo designed parallel heterodimeric coiled coils.

Authors:  Mike C Groth; W Mathis Rink; Nils F Meyer; Franziska Thomas
Journal:  Chem Sci       Date:  2018-04-17       Impact factor: 9.825

4.  Multistage signal-interactive nanoparticles improve tumor targeting through efficient nanoparticle-cell communications.

Authors:  Feng Zhang; Yiran Zhang; Li Kong; Huanhuan Luo; Yuezhou Zhang; Ermei Mäkilä; Jarno Salonen; Jouni T Hirvonen; Yueqi Zhu; Yingsheng Cheng; Lianfu Deng; Hongbo Zhang; Alexander Kros; Wenguo Cui; Hélder A Santos
Journal:  Cell Rep       Date:  2021-05-25       Impact factor: 9.423

  4 in total

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