Literature DB >> 27851940

A Coiled-Coil Peptide Shaping Lipid Bilayers upon Fusion.

Martin Rabe1, Christopher Aisenbrey2, Kristyna Pluhackova3, Vincent de Wert4, Aimee L Boyle4, Didjay F Bruggeman4, Sonja A Kirsch3, Rainer A Böckmann3, Alexander Kros4, Jan Raap4, Burkhard Bechinger5.   

Abstract

A system based on two designed peptides, namely the cationic peptide K, (KIAALKE)3, and its complementary anionic counterpart called peptide E, (EIAALEK)3, has been used as a minimal model for membrane fusion, inspired by SNARE proteins. Although the fact that docking of separate vesicle populations via the formation of a dimeric E/K coiled-coil complex can be rationalized, the reasons for the peptides promoting fusion of vesicles cannot be fully explained. Therefore it is of significant interest to determine how the peptides aid in overcoming energetic barriers during lipid rearrangements leading to fusion. In this study, investigations of the peptides' interactions with neutral PC/PE/cholesterol membranes by fluorescence spectroscopy show that tryptophan-labeled K∗ binds to the membrane (KK∗ ∼6.2 103 M-1), whereas E∗ remains fully water-solvated. 15N-NMR spectroscopy, depth-dependent fluorescence quenching, CD-spectroscopy experiments, and MD simulations indicate a helix orientation of K∗ parallel to the membrane surface. Solid-state 31P-NMR of oriented lipid membranes was used to study the impact of peptide incorporation on lipid headgroup alignment. The membrane-immersed K∗ is found to locally alter the bilayer curvature, accompanied by a change of headgroup orientation relative to the membrane normal and of the lipid composition in the vicinity of the bound peptide. The NMR results were supported by molecular dynamics simulations, which showed that K reorganizes the membrane composition in its vicinity, induces positive membrane curvature, and enhances the lipid tail protrusion probability. These effects are known to be fusion relevant. The combined results support the hypothesis for a twofold role of K in the mechanism of membrane fusion: 1) to bring opposing membranes into close proximity via coiled-coil formation and 2) to destabilize both membranes thereby promoting fusion.
Copyright © 2016 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27851940      PMCID: PMC5113151          DOI: 10.1016/j.bpj.2016.10.010

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  81 in total

1.  Molecular view of hexagonal phase formation in phospholipid membranes.

Authors:  Siewert-Jan Marrink; Alan E Mark
Journal:  Biophys J       Date:  2004-09-17       Impact factor: 4.033

2.  Improved Parameters for the Martini Coarse-Grained Protein Force Field.

Authors:  Djurre H de Jong; Gurpreet Singh; W F Drew Bennett; Clement Arnarez; Tsjerk A Wassenaar; Lars V Schäfer; Xavier Periole; D Peter Tieleman; Siewert J Marrink
Journal:  J Chem Theory Comput       Date:  2012-11-28       Impact factor: 6.006

3.  Coiled-coil driven membrane fusion: zipper-like vs. non-zipper-like peptide orientation.

Authors:  Frank Versluis; Juan Dominguez; Jens Voskuhl; Alexander Kros
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

4.  Atomic-resolution simulations predict a transition state for vesicle fusion defined by contact of a few lipid tails.

Authors:  Peter M Kasson; Erik Lindahl; Vijay S Pande
Journal:  PLoS Comput Biol       Date:  2010-06-24       Impact factor: 4.475

5.  Solid-state NMR investigation of the selective perturbation of lipid bilayers by the cyclic antimicrobial peptide RTD-1.

Authors:  Jarrod J Buffy; Melissa J McCormick; Sungsool Wi; Alan Waring; Robert I Lehrer; Mei Hong
Journal:  Biochemistry       Date:  2004-08-03       Impact factor: 3.162

6.  Pore structure, thinning effect, and lateral diffusive dynamics of oriented lipid membranes interacting with antimicrobial peptide protegrin-1: 31P and 2H solid-state NMR study.

Authors:  Sungsool Wi; Chul Kim
Journal:  J Phys Chem B       Date:  2008-08-14       Impact factor: 2.991

7.  Optimization of the additive CHARMM all-atom protein force field targeting improved sampling of the backbone φ, ψ and side-chain χ(1) and χ(2) dihedral angles.

Authors:  Robert B Best; Xiao Zhu; Jihyun Shim; Pedro E M Lopes; Jeetain Mittal; Michael Feig; Alexander D Mackerell
Journal:  J Chem Theory Comput       Date:  2012-07-18       Impact factor: 6.006

8.  15N chemical shift referencing in solid state NMR.

Authors:  Philippe Bertani; Jésus Raya; Burkhard Bechinger
Journal:  Solid State Nucl Magn Reson       Date:  2014-04-08       Impact factor: 2.293

9.  Controlled fusion of synthetic lipid membrane vesicles.

Authors:  Mingming Ma; Dennis Bong
Journal:  Acc Chem Res       Date:  2013-07-23       Impact factor: 22.384

10.  Melittin binding to mixed phosphatidylglycerol/phosphatidylcholine membranes.

Authors:  G Beschiaschvili; J Seelig
Journal:  Biochemistry       Date:  1990-01-09       Impact factor: 3.162

View more
  14 in total

1.  Interaction of SNARE Mimetic Peptides with Lipid bilayers: Effects of Secondary Structure, Bilayer Composition and Lipid Anchoring.

Authors:  Swapnil Wagle; Vasil N Georgiev; Tom Robinson; Rumiana Dimova; Reinhard Lipowsky; Andrea Grafmüller
Journal:  Sci Rep       Date:  2019-05-22       Impact factor: 4.379

2.  Dual Role of the C-Terminal Domain in Osmosensing by Bacterial Osmolyte Transporter ProP.

Authors:  Doreen E Culham; David Marom; Rebecca Boutin; Jennifer Garner; Tugba Nur Ozturk; Naheda Sahtout; Laura Tempelhagen; Guillaume Lamoureux; Janet M Wood
Journal:  Biophys J       Date:  2018-11-02       Impact factor: 4.033

3.  Spontaneous local membrane curvature induced by transmembrane proteins.

Authors:  Christoph Kluge; Matthias Pöhnl; Rainer A Böckmann
Journal:  Biophys J       Date:  2022-02-03       Impact factor: 4.033

Review 4.  The Multifaceted Role of SNARE Proteins in Membrane Fusion.

Authors:  Jing Han; Kristyna Pluhackova; Rainer A Böckmann
Journal:  Front Physiol       Date:  2017-01-20       Impact factor: 4.566

5.  Coiled-coil formation of the membrane-fusion K/E peptides viewed by electron paramagnetic resonance.

Authors:  Pravin Kumar; Martin van Son; Tingting Zheng; Dayenne Valdink; Jan Raap; Alexander Kros; Martina Huber
Journal:  PLoS One       Date:  2018-01-19       Impact factor: 3.240

6.  Peptide-Mediated Liposome Fusion: The Effect of Anchor Positioning.

Authors:  Niek S A Crone; Dirk Minnee; Alexander Kros; Aimee L Boyle
Journal:  Int J Mol Sci       Date:  2018-01-10       Impact factor: 5.923

7.  Benchmarking of different molecular docking methods for protein-peptide docking.

Authors:  Piyush Agrawal; Harinder Singh; Hemant Kumar Srivastava; Sandeep Singh; Gaurav Kishore; Gajendra P S Raghava
Journal:  BMC Bioinformatics       Date:  2019-02-04       Impact factor: 3.169

8.  Influence of Membrane-Fusogen Distance on the Secondary Structure of Fusogenic Coiled Coil Peptides.

Authors:  Geert A Daudey; Christian Schwieger; Martin Rabe; Alexander Kros
Journal:  Langmuir       Date:  2019-04-10       Impact factor: 3.882

9.  Membrane-Fusogen Distance Is Critical for Efficient Coiled-Coil-Peptide-Mediated Liposome Fusion.

Authors:  Geert A Daudey; Harshal R Zope; Jens Voskuhl; Alexander Kros; Aimee L Boyle
Journal:  Langmuir       Date:  2017-10-18       Impact factor: 3.882

10.  Controlled Peptide-Mediated Vesicle Fusion Assessed by Simultaneous Dual-Colour Time-Lapsed Fluorescence Microscopy.

Authors:  Nestor Lopez Mora; Aimee L Boyle; Bart Jan van Kolck; Anouk Rossen; Šárka Pokorná; Alena Koukalová; Radek Šachl; Martin Hof; Alexander Kros
Journal:  Sci Rep       Date:  2020-02-20       Impact factor: 4.379

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.