Literature DB >> 25468060

Identification of polyunsaturated fatty acid and diterpenoid biosynthesis pathways from draft genome of Aureispira sp. CCB-QB1.

Go Furusawa1, Nyok-Sean Lau2, Alexander Chong Shu-Chien3, Annette Jaya-Ram4, Al-Ashraf Abdullah Amirul3.   

Abstract

The genus Aureispira consisting of two species, Aureispira marina and Aureispira maritima is an arachidonic acid-producing bacterium and produces secondary metabolites. In this study, we isolated a new Aureispira strain, Aureispira sp. CCB-QB1 from coastal area of Penang, Malaysia and the genome sequence of this strain was determined. The draft genome of this strain is composed of 185 contigs for 7,370,077 bases with 35.6% G+C content and contains 5911 protein-coding genes and 76 RNA genes. Linoleoyl-CoA desaturase, the key gene in arachidonic acid biosynthesis, is present in the genome. It was found that this strain uses mevalonate pathway for the synthesis of geranylgeranyl diphosphate (GGPP), which is precursor of diterpenoid, and novel pathway via futalosine for the synthesis of menaquinones. This is the first draft genome sequence of a member of the genus Aureispira.
Copyright © 2014 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Genomics; Polyunsaturated fatty acid; Saprospiraceae; Secondary metabolites

Mesh:

Substances:

Year:  2014        PMID: 25468060     DOI: 10.1016/j.margen.2014.10.006

Source DB:  PubMed          Journal:  Mar Genomics        ISSN: 1874-7787            Impact factor:   1.710


  6 in total

1.  Genes for degradation and utilization of uronic acid-containing polysaccharides of a marine bacterium Catenovulum sp. CCB-QB4.

Authors:  Go Furusawa; Nor Azura Azami; Aik-Hong Teh
Journal:  PeerJ       Date:  2021-03-09       Impact factor: 2.984

2.  Complete genome sequence of Microbulbifer sp. CCB-MM1, a halophile isolated from Matang Mangrove Forest, Malaysia.

Authors:  Tsu Horng Moh; Nyok-Sean Lau; Go Furusawa; Al-Ashraf Abdullah Amirul
Journal:  Stand Genomic Sci       Date:  2017-07-06

3.  Agarolytic bacterium Persicobacter sp. CCB-QB2 exhibited a diauxic growth involving galactose utilization pathway.

Authors:  Go Furusawa; Nyok-Sean Lau; Appalasamy Suganthi; Abdullah Al-Ashraf Amirul
Journal:  Microbiologyopen       Date:  2016-12-17       Impact factor: 3.139

4.  Genome features of moderately halophilic polyhydroxyalkanoate-producing Yangia sp. CCB-MM3.

Authors:  Nyok-Sean Lau; Ka-Kei Sam; Abdullah Al-Ashraf Amirul
Journal:  Stand Genomic Sci       Date:  2017-01-23

5.  Comparative Genomic Analyses of the Genus Photobacterium Illuminate Biosynthetic Gene Clusters Associated with Antagonism.

Authors:  Nyok-Sean Lau; Wooi Liang Heng; Noorizan Miswan; Nor Azura Azami; Go Furusawa
Journal:  Int J Mol Sci       Date:  2022-08-26       Impact factor: 6.208

6.  Draft Genome Sequence of Halophilic Hahella sp. Strain CCB-MM4, Isolated from Matang Mangrove Forest in Perak, Malaysia.

Authors:  Ka-Kei Sam; Nyok-Sean Lau; Go Furusawa; Al-Ashraf Abdullah Amirul
Journal:  Genome Announc       Date:  2017-10-19
  6 in total

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