Literature DB >> 25448987

Juxtamembrane tryptophans have distinct roles in defining the OmpX barrel-micelle boundary and facilitating protein-micelle association.

Deepti Chaturvedi1, Radhakrishnan Mahalakshmi.   

Abstract

Defining the span of the transmembrane region, a key requirement to ensure correct folding, stability and function of bacterial outer membrane β-barrels, is assisted by the amphipathic property of tryptophan. We demonstrate the unique and distinctive properties of the interface Trp76 and Trp140 of outer membrane protein X, and map their positional relevance to the refolding process, barrel formation and the resulting stability in dodecylphosphocholine micelles. The solvent-exposed Trp76 displays a rigid interfacial localization, whereas Trp140 is relatively micelle-solvated and contributes to barrel folding and global OmpX stability. Kinetic contribution to OmpX stability is influenced by the two tryptophans. Differential associations of the indoles with the detergent milieu therefore contribute to micelle-assisted β-barrel folding and concomitant OmpX stability.

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Year:  2014        PMID: 25448987     DOI: 10.1016/j.febslet.2014.10.017

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  8 in total

Review 1.  Implications of aromatic-aromatic interactions: From protein structures to peptide models.

Authors:  Kamlesh Madhusudan Makwana; Radhakrishnan Mahalakshmi
Journal:  Protein Sci       Date:  2015-10-07       Impact factor: 6.725

Review 2.  Transmembrane β-barrels: Evolution, folding and energetics.

Authors:  Deepti Chaturvedi; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-09-22       Impact factor: 3.747

3.  Position-Specific contribution of interface tryptophans on membrane protein energetics.

Authors:  Deepti Chaturvedi; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-11-09       Impact factor: 3.747

4.  Folding Determinants of Transmembrane β-Barrels Using Engineered OMP Chimeras.

Authors:  Deepti Chaturvedi; Radhakrishnan Mahalakshmi
Journal:  Biochemistry       Date:  2018-03-20       Impact factor: 3.162

5.  Control of human VDAC-2 scaffold dynamics by interfacial tryptophans is position specific.

Authors:  Svetlana Rajkumar Maurya; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta       Date:  2016-09-15

6.  An evolutionarily conserved glycine-tyrosine motif forms a folding core in outer membrane proteins.

Authors:  Marcin Michalik; Marcella Orwick-Rydmark; Michael Habeck; Vikram Alva; Thomas Arnold; Dirk Linke
Journal:  PLoS One       Date:  2017-08-03       Impact factor: 3.240

Review 7.  Role of cysteines in mammalian VDAC isoforms' function.

Authors:  Vito De Pinto; Simona Reina; Ankit Gupta; Angela Messina; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta       Date:  2016-03-04

8.  Reversible folding energetics of Yersinia Ail barrel reveals a hyperfluorescent intermediate.

Authors:  Ankit Gupta; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-10-28       Impact factor: 3.747

  8 in total

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