Literature DB >> 25425430

Escherichia coli radD (yejH) gene: a novel function involved in radiation resistance and double-strand break repair.

Stefanie H Chen1, Rose T Byrne, Elizabeth A Wood, Michael M Cox.   

Abstract

A transposon insertion screen implicated the yejH gene in the repair of ionizing radiation-induced damage. The yejH gene, which exhibits significant homology to the human transcription-coupled DNA repair gene XPB, is involved in the repair of double-strand DNA breaks. Deletion of yejH significantly sensitized cells to agents that cause double-strand breaks (ionizing radiation, UV radiation, ciprofloxacin). In addition, deletion of both yejH and radA hypersensitized the cells to ionizing radiation, UV and ciprofloxacin damage, indicating that these two genes have complementary repair functions. The ΔyejH ΔradA double deletion also showed a substantial decline in viability following an induced double-strand DNA break, of a magnitude comparable with the defect measured when the recA, recB, recG or priA genes are deleted. The ATPase activity and C-terminal zinc finger motif of yejH play an important role in its repair function, as targeted mutant alleles of yejH did not rescue sensitivity. We propose that yejH be renamed radD, reflecting its role in the DNA repair of radiation damage.
© 2014 John Wiley & Sons Ltd.

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Year:  2015        PMID: 25425430      PMCID: PMC4339530          DOI: 10.1111/mmi.12885

Source DB:  PubMed          Journal:  Mol Microbiol        ISSN: 0950-382X            Impact factor:   3.501


  70 in total

1.  Crystal structure of the DNA polymerase processivity factor of T4 bacteriophage.

Authors:  I Moarefi; D Jeruzalmi; J Turner; M O'Donnell; J Kuriyan
Journal:  J Mol Biol       Date:  2000-03-10       Impact factor: 5.469

2.  The importance of repairing stalled replication forks.

Authors:  M M Cox; M F Goodman; K N Kreuzer; D J Sherratt; S J Sandler; K J Marians
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

3.  radC102 of Escherichia coli is an allele of recG.

Authors:  M J Lombardo; S M Rosenberg
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

4.  Determination of minimum inhibitory concentrations.

Authors:  J M Andrews
Journal:  J Antimicrob Chemother       Date:  2001-07       Impact factor: 5.790

Review 5.  The bacterial RecA protein and the recombinational DNA repair of stalled replication forks.

Authors:  Shelley L Lusetti; Michael M Cox
Journal:  Annu Rev Biochem       Date:  2001-11-09       Impact factor: 23.643

Review 6.  UV-induced DNA damage and repair: a review.

Authors:  Rajeshwar P Sinha; Donat P Häder
Journal:  Photochem Photobiol Sci       Date:  2002-04       Impact factor: 3.982

7.  E. coli Transcription repair coupling factor (Mfd protein) rescues arrested complexes by promoting forward translocation.

Authors:  Joo-Seop Park; Michael T Marr; Jeffrey W Roberts
Journal:  Cell       Date:  2002-06-14       Impact factor: 41.582

8.  RecBCD enzyme is a DNA helicase with fast and slow motors of opposite polarity.

Authors:  Andrew F Taylor; Gerald R Smith
Journal:  Nature       Date:  2003-06-19       Impact factor: 49.962

9.  One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products.

Authors:  K A Datsenko; B L Wanner
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

Review 10.  Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda.

Authors:  A Kuzminov
Journal:  Microbiol Mol Biol Rev       Date:  1999-12       Impact factor: 11.056

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  14 in total

1.  Interaction with single-stranded DNA-binding protein localizes ribonuclease HI to DNA replication forks and facilitates R-loop removal.

Authors:  Christine Wolak; Hui Jun Ma; Nicolas Soubry; Steven J Sandler; Rodrigo Reyes-Lamothe; James L Keck
Journal:  Mol Microbiol       Date:  2020-06-04       Impact factor: 3.501

2.  Mutant phenotypes for thousands of bacterial genes of unknown function.

Authors:  Morgan N Price; Kelly M Wetmore; R Jordan Waters; Mark Callaghan; Jayashree Ray; Hualan Liu; Jennifer V Kuehl; Ryan A Melnyk; Jacob S Lamson; Yumi Suh; Hans K Carlson; Zuelma Esquivel; Harini Sadeeshkumar; Romy Chakraborty; Grant M Zane; Benjamin E Rubin; Judy D Wall; Axel Visel; James Bristow; Matthew J Blow; Adam P Arkin; Adam M Deutschbauer
Journal:  Nature       Date:  2018-05-16       Impact factor: 49.962

3.  Escherichia coli RadD Protein Functionally Interacts with the Single-stranded DNA-binding Protein.

Authors:  Stefanie H Chen; Rose T Byrne-Nash; Michael M Cox
Journal:  J Biol Chem       Date:  2016-08-12       Impact factor: 5.157

4.  How Archiving by Freezing Affects the Genome-Scale Diversity of Escherichia coli Populations.

Authors:  Kathleen Sprouffske; José Aguilar-Rodríguez; Andreas Wagner
Journal:  Genome Biol Evol       Date:  2016-05-09       Impact factor: 3.416

5.  The structure of an E. coli tRNAfMet A1-U72 variant shows an unusual conformation of the A1-U72 base pair.

Authors:  Auriane Monestier; Alexey Aleksandrov; Pierre-Damien Coureux; Michel Panvert; Yves Mechulam; Emmanuelle Schmitt
Journal:  RNA       Date:  2017-01-31       Impact factor: 4.942

6.  DNA translocation mechanism of an XPD family helicase.

Authors:  Kaiying Cheng; Dale B Wigley
Journal:  Elife       Date:  2018-12-06       Impact factor: 8.140

7.  RadD Contributes to R-Loop Avoidance in Sub-MIC Tobramycin.

Authors:  Veronica Negro; Evelyne Krin; Sebastian Aguilar Pierlé; Thibault Chaze; Quentin Giai Gianetto; Sean P Kennedy; Mariette Matondo; Didier Mazel; Zeynep Baharoglu
Journal:  mBio       Date:  2019-07-02       Impact factor: 7.867

8.  Targeted chromosomal Escherichia coli:dnaB exterior surface residues regulate DNA helicase behavior to maintain genomic stability and organismal fitness.

Authors:  Megan S Behrmann; Himasha M Perera; Joy M Hoang; Trisha A Venkat; Bryan J Visser; David Bates; Michael A Trakselis
Journal:  PLoS Genet       Date:  2021-11-12       Impact factor: 5.917

9.  P1 Ref Endonuclease: A Molecular Mechanism for Phage-Enhanced Antibiotic Lethality.

Authors:  Erin A Ronayne; Y C Serena Wan; Beth A Boudreau; Robert Landick; Michael M Cox
Journal:  PLoS Genet       Date:  2016-01-14       Impact factor: 5.917

10.  Frequent template switching in postreplication gaps: suppression of deleterious consequences by the Escherichia coli Uup and RadD proteins.

Authors:  Zachary J Romero; Thomas J Armstrong; Sarah S Henrikus; Stefanie H Chen; David J Glass; Alexander E Ferrazzoli; Elizabeth A Wood; Sindhu Chitteni-Pattu; Antoine M van Oijen; Susan T Lovett; Andrew Robinson; Michael M Cox
Journal:  Nucleic Acids Res       Date:  2020-01-10       Impact factor: 16.971

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