Literature DB >> 27519413

Escherichia coli RadD Protein Functionally Interacts with the Single-stranded DNA-binding Protein.

Stefanie H Chen1, Rose T Byrne-Nash2, Michael M Cox2.   

Abstract

The bacterial single-stranded DNA binding protein (SSB) acts as an organizer of DNA repair complexes. The radD gene was recently identified as having an unspecified role in repair of radiation damage and, more specifically, DNA double-strand breaks. Purified RadD protein displays a DNA-independent ATPase activity. However, ATP hydrolytic rates are stimulated by SSB through its C terminus. The RadD and SSB proteins also directly interact in vivo in a yeast two-hybrid assay and in vitro through ammonium sulfate co-precipitation. Therefore, it is likely that the repair function of RadD is mediated through interaction with SSB at the site of damage.
© 2016 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  ATPase; DNA repair; SSB; helicase; protein-DNA interaction; protein-protein interaction; radiation biology

Mesh:

Substances:

Year:  2016        PMID: 27519413      PMCID: PMC5034066          DOI: 10.1074/jbc.M116.736223

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  28 in total

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Authors:  Edwin Antony; Elizabeth Weiland; Quan Yuan; Carol M Manhart; Binh Nguyen; Alexander G Kozlov; Charles S McHenry; Timothy M Lohman
Journal:  J Mol Biol       Date:  2013-09-07       Impact factor: 5.469

3.  Interaction with Single-stranded DNA-binding Protein Stimulates Escherichia coli Ribonuclease HI Enzymatic Activity.

Authors:  Christine Petzold; Aimee H Marceau; Katherine H Miller; Susan Marqusee; James L Keck
Journal:  J Biol Chem       Date:  2015-04-22       Impact factor: 5.157

4.  Escherichia coli genes and pathways involved in surviving extreme exposure to ionizing radiation.

Authors:  Rose T Byrne; Stefanie H Chen; Elizabeth A Wood; Eric L Cabot; Michael M Cox
Journal:  J Bacteriol       Date:  2014-07-21       Impact factor: 3.490

5.  PriC-mediated DNA replication restart requires PriC complex formation with the single-stranded DNA-binding protein.

Authors:  Sarah R Wessel; Aimee H Marceau; Shawn C Massoni; Ruobo Zhou; Taekjip Ha; Steven J Sandler; James L Keck
Journal:  J Biol Chem       Date:  2013-04-29       Impact factor: 5.157

6.  Basic and aromatic residues in the C-terminal domain of PriC are involved in ssDNA and SSB binding.

Authors:  Takahiko Aramaki; Yoshito Abe; Kaori Furutani; Tsutomu Katayama; Tadashi Ueda
Journal:  J Biochem       Date:  2015-02-19       Impact factor: 3.387

7.  Continuous association of Escherichia coli single-stranded DNA binding protein with stable complexes of recA protein and single-stranded DNA.

Authors:  S W Morrical; J Lee; M M Cox
Journal:  Biochemistry       Date:  1986-04-08       Impact factor: 3.162

8.  Peptide inhibitors identify roles for SSB C-terminal residues in SSB/exonuclease I complex formation.

Authors:  Duo Lu; Matthew A Windsor; Samuel H Gellman; James L Keck
Journal:  Biochemistry       Date:  2009-07-28       Impact factor: 3.162

9.  Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.

Authors:  J E Walker; M Saraste; M J Runswick; N J Gay
Journal:  EMBO J       Date:  1982       Impact factor: 11.598

10.  Recombinational branch migration by the RadA/Sms paralog of RecA in Escherichia coli.

Authors:  Deani L Cooper; Susan T Lovett
Journal:  Elife       Date:  2016-02-04       Impact factor: 8.140

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  11 in total

1.  Allosteric effects of SSB C-terminal tail on assembly of E. coli RecOR proteins.

Authors:  Min Kyung Shinn; Alexander G Kozlov; Timothy M Lohman
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2.  Structural Mechanisms of Cooperative DNA Binding by Bacterial Single-Stranded DNA-Binding Proteins.

Authors:  Katarzyna Dubiel; Angela R Myers; Alexander G Kozlov; Olivia Yang; Jichuan Zhang; Taekjip Ha; Timothy M Lohman; James L Keck
Journal:  J Mol Biol       Date:  2018-11-22       Impact factor: 5.469

3.  Escherichia coli AlkB interacts with single-stranded DNA binding protein SSB by an intrinsically disordered region of SSB.

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6.  Alternative complexes formed by the Escherichia coli clamp loader accessory protein HolC (x) with replication protein HolD (ψ) and repair protein YoaA.

Authors:  Vincent A Sutera; Savannah J Weeks; Elizabeth E Dudenhausen; Helen B Rappe Baggett; McKay C Shaw; Kirsten A Brand; David J Glass; Linda B Bloom; Susan T Lovett
Journal:  DNA Repair (Amst)       Date:  2021-02-02

7.  RadD Contributes to R-Loop Avoidance in Sub-MIC Tobramycin.

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8.  ClpX Is Essential and Activated by Single-Strand DNA Binding Protein in Mycobacteria.

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Journal:  J Bacteriol       Date:  2021-01-25       Impact factor: 3.490

9.  RadD is a RecA-dependent accessory protein that accelerates DNA strand exchange.

Authors:  Nina J Bonde; Zachary J Romero; Sindhu Chitteni-Pattu; Michael M Cox
Journal:  Nucleic Acids Res       Date:  2022-02-28       Impact factor: 16.971

10.  Frequent template switching in postreplication gaps: suppression of deleterious consequences by the Escherichia coli Uup and RadD proteins.

Authors:  Zachary J Romero; Thomas J Armstrong; Sarah S Henrikus; Stefanie H Chen; David J Glass; Alexander E Ferrazzoli; Elizabeth A Wood; Sindhu Chitteni-Pattu; Antoine M van Oijen; Susan T Lovett; Andrew Robinson; Michael M Cox
Journal:  Nucleic Acids Res       Date:  2020-01-10       Impact factor: 16.971

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