Literature DB >> 25422443

Electric fingerprint of voltage sensor domains.

Caio S Souza1, Cristiano Amaral1, Werner Treptow2.   

Abstract

A dynamic transmembrane voltage field has been suggested as an intrinsic element in voltage sensor (VS) domains. Here, the dynamic field contribution to the VS energetics was analyzed via electrostatic calculations applied to a number of atomistic structures made available recently. We find that the field is largely static along with the molecular motions of the domain, and more importantly, it is minimally modified across VS variants. This finding implies that sensor domains transfer approximately the same amount of gating charges when moving the electrically charged S4 helix between fixed microscopic configurations. Remarkably, the result means that the observed operational diversity of the domain, including the extension, rate, and voltage dependence of the S4 motion, as dictated by the free energy landscape theory, must be rationalized in terms of dominant variations of its chemical free energy.

Keywords:  electrostatics; free energy; ion channel; molecular dynamics; voltage sensor

Year:  2014        PMID: 25422443      PMCID: PMC4267369          DOI: 10.1073/pnas.1413971111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  37 in total

1.  Electrostatics of nanosystems: application to microtubules and the ribosome.

Authors:  N A Baker; D Sept; S Joseph; M J Holst; J A McCammon
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

2.  Improved treatment of the protein backbone in empirical force fields.

Authors:  Alexander D MacKerell; Michael Feig; Charles L Brooks
Journal:  J Am Chem Soc       Date:  2004-01-28       Impact factor: 15.419

3.  Mechanism of voltage gating in potassium channels.

Authors:  Morten Ø Jensen; Vishwanath Jogini; David W Borhani; Abba E Leffler; Ron O Dror; David E Shaw
Journal:  Science       Date:  2012-04-13       Impact factor: 47.728

4.  Imaging alpha-hemolysin with molecular dynamics: ionic conductance, osmotic permeability, and the electrostatic potential map.

Authors:  Aleksij Aksimentiev; Klaus Schulten
Journal:  Biophys J       Date:  2005-03-11       Impact factor: 4.033

5.  Gating charge displacement in voltage-gated ion channels involves limited transmembrane movement.

Authors:  Baron Chanda; Osei Kwame Asamoah; Rikard Blunck; Benoît Roux; Francisco Bezanilla
Journal:  Nature       Date:  2005-08-11       Impact factor: 49.962

6.  A voltage-sensor water pore.

Authors:  J Alfredo Freites; Douglas J Tobias; Stephen H White
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

7.  The membrane potential and its representation by a constant electric field in computer simulations.

Authors:  Benoît Roux
Journal:  Biophys J       Date:  2008-07-18       Impact factor: 4.033

Review 8.  Voltage gating of ion channels.

Authors:  F J Sigworth
Journal:  Q Rev Biophys       Date:  1994-02       Impact factor: 5.318

9.  Atomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment.

Authors:  Stephen B Long; Xiao Tao; Ernest B Campbell; Roderick MacKinnon
Journal:  Nature       Date:  2007-11-15       Impact factor: 49.962

10.  An emerging consensus on voltage-dependent gating from computational modeling and molecular dynamics simulations.

Authors:  Ernesto Vargas; Vladimir Yarov-Yarovoy; Fatemeh Khalili-Araghi; William A Catterall; Michael L Klein; Mounir Tarek; Erik Lindahl; Klaus Schulten; Eduardo Perozo; Francisco Bezanilla; Benoît Roux
Journal:  J Gen Physiol       Date:  2012-12       Impact factor: 4.086

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  10 in total

Review 1.  Functional diversity of potassium channel voltage-sensing domains.

Authors:  León D Islas
Journal:  Channels (Austin)       Date:  2016-01-21       Impact factor: 2.581

Review 2.  Voltage Sensing in Membranes: From Macroscopic Currents to Molecular Motions.

Authors:  J Alfredo Freites; Douglas J Tobias
Journal:  J Membr Biol       Date:  2015-05-14       Impact factor: 1.843

3.  Simulation of Gating Currents of the Shaker K Channel Using a Brownian Model of the Voltage Sensor.

Authors:  Luigi Catacuzzeno; Fabio Franciolini
Journal:  Biophys J       Date:  2019-10-08       Impact factor: 4.033

4.  Gating-induced large aqueous volumetric remodeling and aspartate tolerance in the voltage sensor domain of Shaker K+ channels.

Authors:  Ignacio Díaz-Franulic; Vivian González-Pérez; Hans Moldenhauer; Nieves Navarro-Quezada; David Naranjo
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-23       Impact factor: 11.205

5.  Binding of the general anesthetic sevoflurane to ion channels.

Authors:  Letícia Stock; Juliana Hosoume; Leonardo Cirqueira; Werner Treptow
Journal:  PLoS Comput Biol       Date:  2018-11-26       Impact factor: 4.475

6.  Helix breaking transition in the S4 of HCN channel is critical for hyperpolarization-dependent gating.

Authors:  Marina A Kasimova; Debanjan Tewari; John B Cowgill; Willy Carrasquel Ursuleaz; Jenna L Lin; Lucie Delemotte; Baron Chanda
Journal:  Elife       Date:  2019-11-27       Impact factor: 8.140

7.  Comparative genomic analysis suggests that the sperm-specific sodium/proton exchanger and soluble adenylyl cyclase are key regulators of CatSper among the Metazoa.

Authors:  Francisco Romero; Takuya Nishigaki
Journal:  Zoological Lett       Date:  2019-07-26       Impact factor: 2.836

8.  Tracking the motion of the KV 1.2 voltage sensor reveals the molecular perturbations caused by a de novo mutation in a case of epilepsy.

Authors:  Antonios Pantazis; Maki Kaneko; Marina Angelini; Federica Steccanella; Annie M Westerlund; Sarah H Lindström; Michelle Nilsson; Lucie Delemotte; Sulagna C Saitta; Riccardo Olcese
Journal:  J Physiol       Date:  2020-09-21       Impact factor: 5.182

9.  Structural Mechanisms of Voltage Sensing in G Protein-Coupled Receptors.

Authors:  Owen N Vickery; Jan-Philipp Machtens; Giulia Tamburrino; Daniel Seeliger; Ulrich Zachariae
Journal:  Structure       Date:  2016-05-19       Impact factor: 5.006

10.  Concentration-Dependent Binding of Small Ligands to Multiple Saturable Sites in Membrane Proteins.

Authors:  Letícia Stock; Juliana Hosoume; Werner Treptow
Journal:  Sci Rep       Date:  2017-07-18       Impact factor: 4.379

  10 in total

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