Literature DB >> 25416786

Structural model of weak binding actomyosin in the prepowerstroke state.

Boglárka H Várkuti1, Zhenhui Yang1, Andras Malnasi-Csizmadia2.   

Abstract

We present the first in silico model of the weak binding actomyosin in the initial powerstroke state, representing the actin binding-induced major structural changes in myosin. First, we docked an actin trimer to prepowerstroke myosin then relaxed the complex by a 100-ns long unrestrained molecular dynamics. In the first few nanoseconds, actin binding induced an extra primed myosin state, i.e. the further priming of the myosin lever by 18° coupled to a further closure of switch 2 loop. We demonstrated that actin induces the extra primed state of myosin specifically through the actin N terminus-activation loop interaction. The applied in silico methodology was validated by forming rigor structures that perfectly fitted into an experimentally determined EM map of the rigor actomyosin. Our results unveiled the role of actin in the powerstroke by presenting that actin moves the myosin lever to the extra primed state that leads to the effective lever swing.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Actin; Enzyme Cycle; Enzyme Kinetics; Enzyme Mechanism; Molecular Dynamics; Myosin; Powerstroke; Protein Structure; Structural Model

Mesh:

Substances:

Year:  2014        PMID: 25416786      PMCID: PMC4340411          DOI: 10.1074/jbc.M114.606665

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  33 in total

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