| Literature DB >> 25413694 |
Georg Gerhard Duscher1, Hans-Peter Fuehrer2, Anna Kübber-Heiss3.
Abstract
BACKGROUND: The red fox (Vulpes vulpes) is a widespread species, harbouring many pathogens relevant for humans and pets. Indeed, Anaplasma spp., Ehrlichia canis and Rickettsia spp. among the bacteria and Hepatozoon canis as well as Babesia sp. among the parasites have been the focus of several studies.Entities:
Mesh:
Year: 2014 PMID: 25413694 PMCID: PMC4243377 DOI: 10.1186/s13071-014-0521-7
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
PCR parameters for amplification of DNA of target organisms
|
|
|
|
|
|
|
|
|---|---|---|---|---|---|---|
|
| ||||||
|
| Ehr.u.for: GTT TGA TCC TGG CTC AGG AYD AAC | 30 | 66.8 | 12.5 | 619 | [ |
| ERB2rev: CTC TTT CGA CCT CTA GTC TAG C | ||||||
| Piroplasms (nested) | 1st | 40 | 68 | 25 | 561 | [ |
| BTH-1 F: CCT GAG AAA CGG CTA CCA CAT CT | ||||||
| BTH-1R: TTG CGA CCA TAC TCC CCC CA | ||||||
| 2nd | ||||||
| GF2: GTC TTG TAA TTG GAA TGA TGG | 40 | 60 | 50 | |||
| GR2: CCA AAG ACT TTG ATT TCT CTC | ||||||
|
| Ehr.u.for: GTT TGA TCC TGG CTC AGG AYD AAC | 30 | 65.0 | 20 | 619 | [ |
| Ehr.CCE.rev: CTC TTT CGA CCT CTA GTC TAG C | ||||||
|
| HEPF: ATA CAT GAG CAA AAT CTC AAC | 35 | 57.0 | 10 | 660 | [ |
| HEPR: CTT ATT ATT CCA TGC TGC AG | ||||||
|
| ITS-F: GAT AGG TCG GGT GTG GAA G | 35 | 52 | 1 | 342 – 533 | [ |
| ITS-R: TCG GGA TGG GAT CGT GTG |
PCR results of spleen and blood compared to sequencing results of the investigated foxes (pos = representing a positive PCR product on the gel, neg = delivering no band on the gel, or -like = confirmed sequence of this pathogen in the substrate, “f” indicates false positive samples showing a gel band, but not confirmed during sequencing)
|
| ||||
|---|---|---|---|---|
|
|
|
|
|
|
| 1 |
| pos. f |
| KM115968 |
| 2 |
|
|
| KM115969 |
| 3 |
| pos. |
| KM115970 |
| 4 |
|
|
| KM115971 |
| 5 |
| neg. |
| KM115972 |
| 6 |
| pos. f |
| KM115973 |
| 7 |
|
|
| KM115974 |
| 8 |
| neg. |
| KM115975 |
| 9 |
| neg. |
| KM115976 |
| 10 | pos | pos. f | unclear | |
| 11 |
| pos. f |
| KM115977 |
| 12 |
| neg. |
| KM115978 |
| 13 |
|
|
| KM115979 |
| 14 |
|
|
| KM115980/KM115981 |
| 15 |
| pos. |
| KM115982/KM115983 |
| 16 |
|
|
| KM115984 |
| 17 |
| pos. f |
| KM115985 |
| 18 |
|
|
| KM115986 |
| 19 |
|
|
| KM115987 |
| 20 |
|
|
| KM115988/KM115989 |
| 21 |
| neg. |
| KM115990 |
| 22 |
|
|
| KM115991 |
| 23 |
| neg. |
| KM115992 |
| 24 |
|
|
| KM115993 |
| 25 |
| neg. |
| KM115994 |
| 26 |
|
|
| KM115995 |
| 27 |
|
|
| KM115996 |
| 28 |
| pos. f |
| KM115997 |
| 29 |
|
|
| KM115998 |
| 30 |
|
|
| KM115999/KM116000 |
| 31 |
|
|
| KM116001 |
| 32 | pos. |
|
| KM116002 |
| 33 |
|
|
| KM116003 |
| 34 |
| neg. |
| KM116004 |
| 35 |
|
|
| KM116005 |
| 36 |
| pos. f |
| KM116006 |