Literature DB >> 25406036

How experimental errors influence drug metabolism and pharmacokinetic QSAR/QSPR models.

Mark C Wenlock1, Lars A Carlsson.   

Abstract

We consider the impact of gross, systematic, and random experimental errors in relation to their impact on the predictive ability of QSAR/QSPR DMPK models used within early drug discovery. Models whose training sets contain fewer but repeatedly measured data points, with a defined threshold for the random error, resulted in prediction improvements ranging from 3.3% to 23.0% for an external test set, compared to models built from training sets in which the molecules were defined by single measurements. Similarly, models built on data with low experimental uncertainty, compared to those built on data with higher experimental uncertainty, gave prediction improvements ranging from 3.3% to 27.5%.

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Year:  2014        PMID: 25406036     DOI: 10.1021/ci500535s

Source DB:  PubMed          Journal:  J Chem Inf Model        ISSN: 1549-9596            Impact factor:   4.956


  9 in total

1.  The impact of data integrity on decision making in early lead discovery.

Authors:  Bernd Beck; Daniel Seeliger; Jan M Kriegl
Journal:  J Comput Aided Mol Des       Date:  2015-09-26       Impact factor: 3.686

2.  Interpreting physicochemical experimental data sets.

Authors:  Nicola Colclough; Mark C Wenlock
Journal:  J Comput Aided Mol Des       Date:  2015-06-09       Impact factor: 3.686

3.  Time dependent analysis of assay comparability: a novel approach to understand intra- and inter-site variability over time.

Authors:  Susanne Winiwarter; Brian Middleton; Barry Jones; Paul Courtney; Bo Lindmark; Ken M Page; Alan Clark; Claire Landqvist
Journal:  J Comput Aided Mol Des       Date:  2015-02-20       Impact factor: 3.686

Review 4.  Advancing computer-aided drug discovery (CADD) by big data and data-driven machine learning modeling.

Authors:  Linlin Zhao; Heather L Ciallella; Lauren M Aleksunes; Hao Zhu
Journal:  Drug Discov Today       Date:  2020-07-11       Impact factor: 7.851

5.  Multi-task convolutional neural networks for predicting in vitro clearance endpoints from molecular images.

Authors:  Andrés Martínez Mora; Vigneshwari Subramanian; Filip Miljković
Journal:  J Comput Aided Mol Des       Date:  2022-05-27       Impact factor: 4.179

Review 6.  Applications of artificial intelligence to drug design and discovery in the big data era: a comprehensive review.

Authors:  Neetu Tripathi; Manoj Kumar Goshisht; Sanat Kumar Sahu; Charu Arora
Journal:  Mol Divers       Date:  2021-06-10       Impact factor: 2.943

7.  Experimental Errors in QSAR Modeling Sets: What We Can Do and What We Cannot Do.

Authors:  Linlin Zhao; Wenyi Wang; Alexander Sedykh; Hao Zhu
Journal:  ACS Omega       Date:  2017-06-19

8.  Ezqsar: An R Package for Developing QSAR Models Directly From Structures.

Authors:  Jamal Shamsara
Journal:  Open Med Chem J       Date:  2017-11-30

9.  Oral drug suitability parameters.

Authors:  M C Wenlock
Journal:  Medchemcomm       Date:  2018-02-05       Impact factor: 3.597

  9 in total

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