Literature DB >> 25404205

Genetic improvement of native xylose-fermenting yeasts for ethanol production.

Nicole K Harner1, Xin Wen, Paramjit K Bajwa, Glen D Austin, Chi-Yip Ho, Marc B Habash, Jack T Trevors, Hung Lee.   

Abstract

Lignocellulosic substrates are the largest source of fermentable sugars for bioconversion to fuel ethanol and other valuable compounds. To improve the economics of biomass conversion, it is essential that all sugars in potential hydrolysates be converted efficiently into the desired product(s). While hexoses are fermented into ethanol and some high-value chemicals, the bioconversion of pentoses in hydrolysates remains inefficient. This remains one of the key challenges in lignocellulosic biomass conversion. Native pentose-fermenting yeasts can ferment both glucose and xylose in lignocellulosic biomass to ethanol. However, they perform poorly in the presence of hydrolysate inhibitors, exhibit low ethanol tolerance and glucose repression, and ferment pentoses less efficiently than the main hexoses glucose and mannose. This paper reviews classical and molecular strain improvement strategies applied to native pentose-fermenting yeasts for improved ethanol production from xylose and lignocellulosic substrates. We focus on Pachysolen tannophilus, Scheffersomyces (Candida) shehatae, Scheffersomyces (Pichia) stipitis, and Spathaspora passalidarum which are good ethanol producers among the native xylose-fermenting yeasts. Strains obtained thus far are not robust enough for efficient ethanol production from lignocellulosic hydrolysates and can benefit from further improvements.

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Year:  2014        PMID: 25404205     DOI: 10.1007/s10295-014-1535-z

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  72 in total

1.  Anaerobic xylose fermentation by Spathaspora passalidarum.

Authors:  X Hou
Journal:  Appl Microbiol Biotechnol       Date:  2011-11-30       Impact factor: 4.813

2.  Induction of Xylose Reductase and Xylitol Dehydrogenase Activities in Pachysolen tannophilus and Pichia stipitis on Mixed Sugars.

Authors:  Paul A Bicho; P Lynn Runnals; J Douglas Cunningham; Hung Lee
Journal:  Appl Environ Microbiol       Date:  1988-01       Impact factor: 4.792

3.  Concurrent Production and Consumption of Ethanol by Cultures of Pachysolen tannophilus Growing on d-Xylose.

Authors:  R Maleszka; H Schneider
Journal:  Appl Environ Microbiol       Date:  1982-10       Impact factor: 4.792

4.  Ethanol production from xylose by a recombinant Candida utilis strain expressing protein-engineered xylose reductase and xylitol dehydrogenase.

Authors:  Hideyuki Tamakawa; Shigehito Ikushima; Satoshi Yoshida
Journal:  Biosci Biotechnol Biochem       Date:  2011-10-07       Impact factor: 2.043

5.  Improved ethanol and reduced xylitol production from glucose and xylose mixtures by the mutant strain of Candida shehatae ATCC 22984.

Authors:  Yuan Li; Jeung-yil Park; Riki Shiroma; Masakazu Ike; Ken Tokuyasu
Journal:  Appl Biochem Biotechnol       Date:  2012-02-11       Impact factor: 2.926

6.  Structure of xylose reductase bound to NAD+ and the basis for single and dual co-substrate specificity in family 2 aldo-keto reductases.

Authors:  Kathryn L Kavanagh; Mario Klimacek; Bernd Nidetzky; David K Wilson
Journal:  Biochem J       Date:  2003-07-15       Impact factor: 3.857

7.  The coenzyme specificity of Candida tenuis xylose reductase (AKR2B5) explored by site-directed mutagenesis and X-ray crystallography.

Authors:  Barbara Petschacher; Stefan Leitgeb; Kathryn L Kavanagh; David K Wilson; Bernd Nidetzky
Journal:  Biochem J       Date:  2005-01-01       Impact factor: 3.857

8.  Dual relationships of xylitol and alcohol dehydrogenases in families of two protein types.

Authors:  B Persson; J Hallborn; M Walfridsson; B Hahn-Hägerdal; S Keränen; M Penttilä; H Jörnvall
Journal:  FEBS Lett       Date:  1993-06-07       Impact factor: 4.124

9.  Purification and partial characterization of an aldo-keto reductase from Saccharomyces cerevisiae.

Authors:  A Kuhn; C van Zyl; A van Tonder; B A Prior
Journal:  Appl Environ Microbiol       Date:  1995-04       Impact factor: 4.792

10.  Quantitative transcription dynamic analysis reveals candidate genes and key regulators for ethanol tolerance in Saccharomyces cerevisiae.

Authors:  Menggen Ma; Lewis Z Liu
Journal:  BMC Microbiol       Date:  2010-06-10       Impact factor: 3.605

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  12 in total

1.  Deletion of hxk1 gene results in derepression of xylose utilization in Scheffersomyces stipitis.

Authors:  Mehdi Dashtban; Xin Wen; Paramjit K Bajwa; Chi-Yip Ho; Hung Lee
Journal:  J Ind Microbiol Biotechnol       Date:  2015-04-08       Impact factor: 3.346

2.  Physiological comparisons among Spathaspora passalidarum, Spathaspora arborariae, and Scheffersomyces stipitis reveal the bottlenecks for their use in the production of second-generation ethanol.

Authors:  Valquíria Júnia Campos; Lílian Emídio Ribeiro; Fernanda Matias Albuini; Alex Gazolla de Castro; Patrícia Pereira Fontes; Wendel Batista da Silveira; Carlos Augusto Rosa; Luciano Gomes Fietto
Journal:  Braz J Microbiol       Date:  2022-02-16       Impact factor: 2.214

3.  The current and emerging sources of technical lignins and their applications.

Authors:  Tao Li; Sudhakar Takkellapati
Journal:  Biofuel Bioprod Biorefin       Date:  2018-07-18

4.  Continuous Ethanol Fermentation of Pretreated Lignocellulosic Biomasses, Waste Biomasses, Molasses and Syrup Using the Anaerobic, Thermophilic Bacterium Thermoanaerobacter italicus Pentocrobe 411.

Authors:  Rasmus Lund Andersen; Karen Møller Jensen; Marie Just Mikkelsen
Journal:  PLoS One       Date:  2015-08-21       Impact factor: 3.240

Review 5.  Production of fuels and chemicals from xylose by engineered Saccharomyces cerevisiae: a review and perspective.

Authors:  Suryang Kwak; Yong-Su Jin
Journal:  Microb Cell Fact       Date:  2017-05-11       Impact factor: 5.328

6.  Improvement of Candida parapsilosis by genome shuffling for the efficient production of arabitol from l-arabinose.

Authors:  Monika Kordowska-Wiater; Urszula Lisiecka; Krzysztof Kostro
Journal:  Food Sci Biotechnol       Date:  2018-04-04       Impact factor: 2.391

7.  De novo whole-genome assembly of a wild type yeast isolate using nanopore sequencing.

Authors:  Michael Liem; Hans J Jansen; Ron P Dirks; Christiaan V Henkel; G Paul H van Heusden; Richard J L F Lemmers; Trifa Omer; Shuai Shao; Peter J Punt; Herman P Spaink
Journal:  F1000Res       Date:  2017-05-03

8.  Evolutionary engineered Candida intermedia exhibits improved xylose utilization and robustness to lignocellulose-derived inhibitors and ethanol.

Authors:  Antonio D Moreno; Antonella Carbone; Rosita Pavone; Lisbeth Olsson; Cecilia Geijer
Journal:  Appl Microbiol Biotechnol       Date:  2018-11-29       Impact factor: 4.813

9.  Exploring xylose metabolism in Spathaspora species: XYL1.2 from Spathaspora passalidarum as the key for efficient anaerobic xylose fermentation in metabolic engineered Saccharomyces cerevisiae.

Authors:  Raquel M Cadete; Alejandro M de Las Heras; Anders G Sandström; Carla Ferreira; Francisco Gírio; Marie-Françoise Gorwa-Grauslund; Carlos A Rosa; César Fonseca
Journal:  Biotechnol Biofuels       Date:  2016-08-05       Impact factor: 6.040

10.  Highly efficient conversion of xylose to ethanol without glucose repression by newly isolated thermotolerant Spathaspora passalidarum CMUWF1-2.

Authors:  Nadchanok Rodrussamee; Pachara Sattayawat; Mamoru Yamada
Journal:  BMC Microbiol       Date:  2018-07-13       Impact factor: 3.605

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