Literature DB >> 25403473

RPA-coated single-stranded DNA as a platform for post-translational modifications in the DNA damage response.

Alexandre Maréchal1, Lee Zou2.   

Abstract

The Replication Protein A (RPA) complex is an essential regulator of eukaryotic DNA metabolism. RPA avidly binds to single-stranded DNA (ssDNA) through multiple oligonucleotide/oligosaccharide-binding folds and coordinates the recruitment and exchange of genome maintenance factors to regulate DNA replication, recombination and repair. The RPA-ssDNA platform also constitutes a key physiological signal which activates the master ATR kinase to protect and repair stalled or collapsed replication forks during replication stress. In recent years, the RPA complex has emerged as a key target and an important regulator of post-translational modifications in response to DNA damage, which is critical for its genome guardian functions. Phosphorylation and SUMOylation of the RPA complex, and more recently RPA-regulated ubiquitination, have all been shown to control specific aspects of DNA damage signaling and repair by modulating the interactions between RPA and its partners. Here, we review our current understanding of the critical functions of the RPA-ssDNA platform in the maintenance of genome stability and its regulation through an elaborate network of covalent modifications.

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Year:  2014        PMID: 25403473      PMCID: PMC4650586          DOI: 10.1038/cr.2014.147

Source DB:  PubMed          Journal:  Cell Res        ISSN: 1001-0602            Impact factor:   25.617


  183 in total

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Authors:  Jacob G Robison; James Elliott; Kathleen Dixon; Gregory G Oakley
Journal:  J Biol Chem       Date:  2004-06-04       Impact factor: 5.157

2.  Structural mechanism of RPA loading on DNA during activation of a simple pre-replication complex.

Authors:  Xiaohua Jiang; Vitaly Klimovich; Alphonse I Arunkumar; Erik B Hysinger; Yingda Wang; Robert D Ott; Gulfem D Guler; Brian Weiner; Walter J Chazin; Ellen Fanning
Journal:  EMBO J       Date:  2006-11-16       Impact factor: 11.598

3.  The structure of the yFACT Pob3-M domain, its interaction with the DNA replication factor RPA, and a potential role in nucleosome deposition.

Authors:  Andrew P VanDemark; Mary Blanksma; Elliott Ferris; Annie Heroux; Christopher P Hill; Tim Formosa
Journal:  Mol Cell       Date:  2006-05-05       Impact factor: 17.970

4.  RPA2 is a direct downstream target for ATR to regulate the S-phase checkpoint.

Authors:  Erin Olson; Christian J Nievera; Vitaly Klimovich; Ellen Fanning; Xiaohua Wu
Journal:  J Biol Chem       Date:  2006-10-10       Impact factor: 5.157

5.  TopBP1 activates the ATR-ATRIP complex.

Authors:  Akiko Kumagai; Joon Lee; Hae Yong Yoo; William G Dunphy
Journal:  Cell       Date:  2006-03-10       Impact factor: 41.582

6.  Replication of simian virus 40 origin-containing DNA in vitro with purified proteins.

Authors:  C R Wobbe; L Weissbach; J A Borowiec; F B Dean; Y Murakami; P Bullock; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1987-04       Impact factor: 11.205

7.  Replication protein A directs loading of the DNA damage checkpoint clamp to 5'-DNA junctions.

Authors:  Jerzy Majka; Sara K Binz; Marc S Wold; Peter M J Burgers
Journal:  J Biol Chem       Date:  2006-07-24       Impact factor: 5.157

8.  Replication protein A interacts with AID to promote deamination of somatic hypermutation targets.

Authors:  Jayanta Chaudhuri; Chan Khuong; Frederick W Alt
Journal:  Nature       Date:  2004-07-25       Impact factor: 49.962

Review 9.  Replication protein A phosphorylation and the cellular response to DNA damage.

Authors:  Sara K Binz; Anne M Sheehan; Marc S Wold
Journal:  DNA Repair (Amst)       Date:  2004 Aug-Sep

Review 10.  A dynamic model for replication protein A (RPA) function in DNA processing pathways.

Authors:  Ellen Fanning; Vitaly Klimovich; Andrew R Nager
Journal:  Nucleic Acids Res       Date:  2006-08-25       Impact factor: 16.971

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  159 in total

1.  Structure-Guided Optimization of Replication Protein A (RPA)-DNA Interaction Inhibitors.

Authors:  Navnath S Gavande; Pamela S VanderVere-Carozza; Katherine S Pawelczak; Tyler L Vernon; Matthew R Jordan; John J Turchi
Journal:  ACS Med Chem Lett       Date:  2020-01-02       Impact factor: 4.345

2.  Inhibition of checkpoint kinase 1 following gemcitabine-mediated S phase arrest results in CDC7- and CDK2-dependent replication catastrophe.

Authors:  Nicholas J H Warren; Alan Eastman
Journal:  J Biol Chem       Date:  2018-12-20       Impact factor: 5.157

Review 3.  Proteolytic control of genome integrity at the replication fork.

Authors:  Julie Rageul; Alexandra S Weinheimer; Jennifer J Park; Hyungjin Kim
Journal:  DNA Repair (Amst)       Date:  2019-07-10

Review 4.  Shieldin - the protector of DNA ends.

Authors:  Dheva Setiaputra; Daniel Durocher
Journal:  EMBO Rep       Date:  2019-04-04       Impact factor: 8.807

5.  RPA Phosphorylation Inhibits DNA Resection.

Authors:  Michael M Soniat; Logan R Myler; Hung-Che Kuo; Tanya T Paull; Ilya J Finkelstein
Journal:  Mol Cell       Date:  2019-05-29       Impact factor: 17.970

6.  The Essential, Ubiquitous Single-Stranded DNA-Binding Proteins.

Authors:  Marcos T Oliveira; Grzegorz L Ciesielski
Journal:  Methods Mol Biol       Date:  2021

7.  Rtt105 functions as a chaperone for replication protein A to preserve genome stability.

Authors:  Shuqi Li; Zhiyun Xu; Jiawei Xu; Linyu Zuo; Chuanhe Yu; Pu Zheng; Haiyun Gan; Xuezheng Wang; Longtu Li; Sushma Sharma; Andrei Chabes; Di Li; Sheng Wang; Sihao Zheng; Jinbao Li; Xuefeng Chen; Yujie Sun; Dongyi Xu; Junhong Han; Kuiming Chan; Zhi Qi; Jianxun Feng; Qing Li
Journal:  EMBO J       Date:  2018-07-31       Impact factor: 11.598

8.  Disruption of CDK-resistant chromatin association by pRB causes DNA damage, mitotic errors, and reduces Condensin II recruitment.

Authors:  Charles A Ishak; Courtney H Coschi; Michael V Roes; Frederick A Dick
Journal:  Cell Cycle       Date:  2017-07-19       Impact factor: 4.534

9.  E4 ligase-specific ubiquitination hubs coordinate DNA double-strand-break repair and apoptosis.

Authors:  Leena Ackermann; Michael Schell; Wojciech Pokrzywa; Éva Kevei; Anton Gartner; Björn Schumacher; Thorsten Hoppe
Journal:  Nat Struct Mol Biol       Date:  2016-09-26       Impact factor: 15.369

10.  Replication protein A dynamically regulates monoubiquitination of proliferating cell nuclear antigen.

Authors:  Mark Hedglin; Mahesh Aitha; Anthony Pedley; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2019-01-30       Impact factor: 5.157

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