Literature DB >> 25399320

Solid-state NMR, electrophysiology and molecular dynamics characterization of human VDAC2.

Zrinka Gattin1, Robert Schneider, Yvonne Laukat, Karin Giller, Elke Maier, Markus Zweckstetter, Christian Griesinger, Roland Benz, Stefan Becker, Adam Lange.   

Abstract

The voltage-dependent anion channel (VDAC) is the most abundant protein of the outer mitochondrial membrane and constitutes the major pathway for the transport of ADP, ATP, and other metabolites. In this multidisciplinary study we combined solid-state NMR, electrophysiology, and molecular dynamics simulations, to study the structure of the human VDAC isoform 2 in a lipid bilayer environment. We find that the structure of hVDAC2 is similar to the structure of hVDAC1, in line with recent investigations on zfVDAC2. However, hVDAC2 appears to exhibit an increased conformational heterogeneity compared to hVDAC1 which is reflected in broader solid-state NMR spectra and less defined electrophysiological profiles.

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Year:  2014        PMID: 25399320      PMCID: PMC5653203          DOI: 10.1007/s10858-014-9876-5

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  42 in total

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Journal:  J Biol Chem       Date:  1997-07-25       Impact factor: 5.157

2.  Functional dynamics in the voltage-dependent anion channel.

Authors:  Saskia Villinger; Rodolfo Briones; Karin Giller; Ulrich Zachariae; Adam Lange; Bert L de Groot; Christian Griesinger; Stefan Becker; Markus Zweckstetter
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-10       Impact factor: 11.205

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Journal:  Biochim Biophys Acta       Date:  1994-06-29

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Journal:  Biochim Biophys Acta       Date:  1983-12-07

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Authors:  S J Schein; M Colombini; A Finkelstein
Journal:  J Membr Biol       Date:  1976-12-28       Impact factor: 1.843

7.  The crystal structure of mouse VDAC1 at 2.3 A resolution reveals mechanistic insights into metabolite gating.

Authors:  Rachna Ujwal; Duilio Cascio; Jacques-Philippe Colletier; Salem Faham; Jun Zhang; Ligia Toro; Peipei Ping; Jeff Abramson
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-06       Impact factor: 11.205

8.  Structure of the human voltage-dependent anion channel.

Authors:  Monika Bayrhuber; Thomas Meins; Michael Habeck; Stefan Becker; Karin Giller; Saskia Villinger; Clemens Vonrhein; Christian Griesinger; Markus Zweckstetter; Kornelius Zeth
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-01       Impact factor: 11.205

9.  Concentration dependent ion selectivity in VDAC: a molecular dynamics simulation study.

Authors:  Eva-Maria Krammer; Fabrice Homblé; Martine Prévost
Journal:  PLoS One       Date:  2011-12-02       Impact factor: 3.240

10.  Nucleotide interactions of the human voltage-dependent anion channel.

Authors:  Saskia Villinger; Karin Giller; Monika Bayrhuber; Adam Lange; Christian Griesinger; Stefan Becker; Markus Zweckstetter
Journal:  J Biol Chem       Date:  2014-03-25       Impact factor: 5.157

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  15 in total

1.  NMR studies of membrane proteins.

Authors:  Rob Kaptein; Gerhard Wagner
Journal:  J Biomol NMR       Date:  2015-04       Impact factor: 2.835

Review 2.  Pharmacological modulation of mitochondrial ion channels.

Authors:  Luigi Leanza; Vanessa Checchetto; Lucia Biasutto; Andrea Rossa; Roberto Costa; Magdalena Bachmann; Mario Zoratti; Ildiko Szabo
Journal:  Br J Pharmacol       Date:  2019-01-02       Impact factor: 8.739

3.  Structural characterization of the human membrane protein VDAC2 in lipid bilayers by MAS NMR.

Authors:  Matthew T Eddy; Tsyr-Yan Yu; Gerhard Wagner; Robert G Griffin
Journal:  J Biomol NMR       Date:  2019-08-12       Impact factor: 2.835

4.  Motifs of VDAC2 required for mitochondrial Bak import and tBid-induced apoptosis.

Authors:  Shamim Naghdi; Péter Várnai; György Hajnóczky
Journal:  Proc Natl Acad Sci U S A       Date:  2015-09-28       Impact factor: 11.205

Review 5.  VDAC2-specific cellular functions and the underlying structure.

Authors:  Shamim Naghdi; György Hajnóczky
Journal:  Biochim Biophys Acta       Date:  2016-04-23

6.  N-helix and Cysteines Inter-regulate Human Mitochondrial VDAC-2 Function and Biochemistry.

Authors:  Svetlana Rajkumar Maurya; Radhakrishnan Mahalakshmi
Journal:  J Biol Chem       Date:  2015-10-20       Impact factor: 5.157

7.  Control of human VDAC-2 scaffold dynamics by interfacial tryptophans is position specific.

Authors:  Svetlana Rajkumar Maurya; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta       Date:  2016-09-15

8.  Membrane topologies of the PGLa antimicrobial peptide and a transmembrane anchor sequence by Dynamic Nuclear Polarization/solid-state NMR spectroscopy.

Authors:  Evgeniy Sergeevich Salnikov; Christopher Aisenbrey; Fabien Aussenac; Olivier Ouari; Hiba Sarrouj; Christian Reiter; Paul Tordo; Frank Engelke; Burkhard Bechinger
Journal:  Sci Rep       Date:  2016-02-15       Impact factor: 4.379

Review 9.  VDAC-2: Mitochondrial outer membrane regulator masquerading as a channel?

Authors:  Svetlana Rajkumar Maurya; Radhakrishnan Mahalakshmi
Journal:  FEBS J       Date:  2016-01-13       Impact factor: 5.542

Review 10.  Role of cysteines in mammalian VDAC isoforms' function.

Authors:  Vito De Pinto; Simona Reina; Ankit Gupta; Angela Messina; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta       Date:  2016-03-04
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