Literature DB >> 2538719

Transcriptional promiscuity of the human alpha-globin gene.

E Whitelaw1, P Hogben, O Hanscombe, N J Proudfoot.   

Abstract

The human alpha-globin gene displays the unusual property of transcriptional promiscuity: that is, it functions in the absence of an enhancer when transfected into nonerythroid cell lines. It is also unusual in that its promoter region lies in a hypomethylated HpaII tiny fragment (HTF) island containing multiple copies of the consensus sequence for the SP1-binding site. We have investigated whether there is a relationship between these two observations. First, we investigated the mouse alpha-globin gene since it does not lie in an HTF island. We have demonstrated that it was not transcriptionally promiscuous. Second, we studied the transcriptional activity of the human alpha-globin gene in the absence of the GC-rich region containing putative SP1-binding sites and found a small (two- to threefold) but consistent positive effect of this region on transcriptional activity in both nonerythroid and erythroid cell lines. However, this effect did not account for the promiscuous nature of the human alpha-globin gene. We found that in a nonreplicating system, the human alpha-globin gene, like that of the mouse, required a simian virus 40 enhancer in order to be transcriptionally active in nonerythroid and erythroid cell lines. Since we only observed enhancer independence of the human alpha-globin gene in a high-copy-number replicating system, we suggest that competition for trans-acting factors could explain these results. Finally, our experiments with the erythroid cell line Putko suggest that there are no tissue-specific enhancers within 1 kilobase 5' of the human alpha-globin cap site or within the gene itself.

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Year:  1989        PMID: 2538719      PMCID: PMC362166          DOI: 10.1128/mcb.9.1.241-251.1989

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  43 in total

1.  Cell- and promoter-specific activation of transcription by DNA replication.

Authors:  D S Grass; D Read; E D Lewis; J L Manley
Journal:  Genes Dev       Date:  1987-12       Impact factor: 11.361

2.  Unusual features of CpG-rich (HTF) islands in the human alpha globin complex: association with non-functional pseudogenes and presence within the 3' portion of the zeta gene.

Authors:  N Fischel-Ghodsian; R D Nicholls; D R Higgs
Journal:  Nucleic Acids Res       Date:  1987-11-25       Impact factor: 16.971

Review 3.  Germ-line transformation of mice.

Authors:  R D Palmiter; R L Brinster
Journal:  Annu Rev Genet       Date:  1986       Impact factor: 16.830

4.  A candidate for the cystic fibrosis locus isolated by selection for methylation-free islands.

Authors:  X Estivill; M Farrall; P J Scambler; G M Bell; K M Hawley; N J Lench; G P Bates; H C Kruyer; P A Frederick; P Stanier
Journal:  Nature       Date:  1987 Apr 30-May 6       Impact factor: 49.962

5.  Two 3' sequences direct adult erythroid-specific expression of human beta-globin genes in transgenic mice.

Authors:  R R Behringer; R E Hammer; R L Brinster; R D Palmiter; T M Townes
Journal:  Proc Natl Acad Sci U S A       Date:  1987-10       Impact factor: 11.205

6.  Human globin gene promoter sequences are sufficient for specific expression of a hybrid gene transfected into tissue culture cells.

Authors:  T Rutherford; A W Nienhuis
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

7.  Several distinct "CCAAT" box binding proteins coexist in eukaryotic cells.

Authors:  M Raymondjean; S Cereghini; M Yaniv
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

8.  Position-independent, high-level expression of the human beta-globin gene in transgenic mice.

Authors:  F Grosveld; G B van Assendelft; D R Greaves; G Kollias
Journal:  Cell       Date:  1987-12-24       Impact factor: 41.582

9.  Coincident start sites for divergent transcripts at a randomly selected CpG-rich island of mouse.

Authors:  P Lavia; D Macleod; A Bird
Journal:  EMBO J       Date:  1987-09       Impact factor: 11.598

10.  Non-methylated CpG-rich islands at the human alpha-globin locus: implications for evolution of the alpha-globin pseudogene.

Authors:  A P Bird; M H Taggart; R D Nicholls; D R Higgs
Journal:  EMBO J       Date:  1987-04       Impact factor: 11.598

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  16 in total

1.  Transcription of the human U2 snRNA genes continues beyond the 3' box in vivo.

Authors:  P Cuello; D C Boyd; M J Dye; N J Proudfoot; S Murphy
Journal:  EMBO J       Date:  1999-05-17       Impact factor: 11.598

2.  The CpG island of chicken alpha-globin genes contains no signals sufficient for the maintenance of its nonmethylated state in transgenic mouse genome.

Authors:  E S Ioudinkova; S G Kadulin; I L Gol'dman; S V Razin; L V Verbovaya
Journal:  Dokl Biochem Biophys       Date:  2004 May-Jun       Impact factor: 0.788

3.  CpG islands from the alpha-globin gene cluster increase gene expression in an integration-dependent manner.

Authors:  B M Shewchuk; R C Hardison
Journal:  Mol Cell Biol       Date:  1997-10       Impact factor: 4.272

4.  A factor binding GATAAG confers tissue specificity on the promoter of the human zeta-globin gene.

Authors:  P Watt; P Lamb; L Squire; N Proudfoot
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

5.  Transcription and polyadenylation in a short human intergenic region.

Authors:  S Brackenridge; H L Ashe; M Giacca; N J Proudfoot
Journal:  Nucleic Acids Res       Date:  1997-06-15       Impact factor: 16.971

6.  Transcriptional activation of human adult alpha-globin genes by hypersensitive site-40 enhancer: function of nuclear factor-binding motifs occupied in erythroid cells.

Authors:  I Rombel; K Y Hu; Q Zhang; T Papayannopoulou; G Stamatoyannopoulos; C K Shen
Journal:  Proc Natl Acad Sci U S A       Date:  1995-07-03       Impact factor: 11.205

7.  Sp1 functions in a chromatin-dependent manner to augment human alpha-globin promoter activity.

Authors:  M D Pondel; S Murphy; L Pearson; C Craddock; N J Proudfoot
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-01       Impact factor: 11.205

8.  Activation domains of transcription factors mediate replication dependent transcription from a minimal HIV-1 promoter.

Authors:  R D Williams; B A Lee; S P Jackson; N J Proudfoot
Journal:  Nucleic Acids Res       Date:  1996-02-15       Impact factor: 16.971

9.  Nuclear protein-binding sites in a transcriptional control region of the rabbit alpha-globin gene.

Authors:  S E Yost; B Shewchuk; R Hardison
Journal:  Mol Cell Biol       Date:  1993-09       Impact factor: 4.272

10.  Species-specific organization of CpG island promoters at mammalian homologous genes.

Authors:  M Cuadrado; M Sacristán; F Antequera
Journal:  EMBO Rep       Date:  2001-07-03       Impact factor: 8.807

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