Literature DB >> 25383062

Electronic Polarizability and the Effective Pair Potentials of Water.

I V Leontyev1, A A Stuchebrukhov1.   

Abstract

Employing the continuum dielectric model for electronic polarizability, we have developed a new consistent procedure for parameterization of the effective nonpolarizable potential of liquid water. The model explains the striking difference between the value of water dipole moment μ~3D reported in recent ab initio and experimental studies with the value μeff ~2.3D typically used in the empirical potentials, such as TIP3P or SPC/E. It is shown that the consistency of the parameterization scheme can be achieved if the magnitude of the effective dipole of water is understood as a scaled value [Formula: see text], where εel =1.78 is the electronic (high-frequency) dielectric constant of water, and a new electronic polarization energy term, missing in the previous theories, is included. The new term is evaluated by using Kirkwood - Onsager theory. The new scheme is fully consistent with experimental data on enthalpy of vaporization, density, diffusion coefficient, and static dielectric constant. The new theoretical framework provides important insights into the nature of the effective parameters, which is crucial when the computational models of liquid water are used for simulations in different environments, such as proteins, or for interaction with solutes.

Entities:  

Year:  2010        PMID: 25383062      PMCID: PMC4224308          DOI: 10.1021/ct1002048

Source DB:  PubMed          Journal:  J Chem Theory Comput        ISSN: 1549-9618            Impact factor:   6.006


  4 in total

1.  Electronic continuum model for molecular dynamics simulations of biological molecules.

Authors:  I V Leontyev; A A Stuchebrukhov
Journal:  J Chem Theory Comput       Date:  2010       Impact factor: 6.006

2.  Dipolar correlations and the dielectric permittivity of water.

Authors:  Manu Sharma; Raffaele Resta; Roberto Car
Journal:  Phys Rev Lett       Date:  2007-06-13       Impact factor: 9.161

3.  Electronic continuum model for molecular dynamics simulations.

Authors:  I V Leontyev; A A Stuchebrukhov
Journal:  J Chem Phys       Date:  2009-02-28       Impact factor: 3.488

4.  The Water Dipole Moment in Water Clusters

Authors: 
Journal:  Science       Date:  1997-02-07       Impact factor: 47.728

  4 in total
  14 in total

Review 1.  Metal Ion Modeling Using Classical Mechanics.

Authors:  Pengfei Li; Kenneth M Merz
Journal:  Chem Rev       Date:  2017-01-03       Impact factor: 60.622

2.  Polarizable molecular interactions in condensed phase and their equivalent nonpolarizable models.

Authors:  Igor V Leontyev; Alexei A Stuchebrukhov
Journal:  J Chem Phys       Date:  2014-07-07       Impact factor: 3.488

3.  Implementing electrostatic polarization cannot fill the gap between experimental and theoretical measurements for the ultrafast fluorescence decay of myoglobin.

Authors:  Bingbing Lin; Ya Gao; Yongxiu Li; John Z H Zhang; Ye Mei
Journal:  J Mol Model       Date:  2014-03-27       Impact factor: 1.810

4.  Polarizable Mean-Field Model of Water for Biological Simulations with Amber and Charmm force fields.

Authors:  Igor V Leontyev; Alexei A Stuchebrukhov
Journal:  J Chem Theory Comput       Date:  2012-09-11       Impact factor: 6.006

5.  Applicability of a thermodynamic cycle approach for a force field parametrization targeting non-aqueous solvation free energies.

Authors:  Andreas Mecklenfeld; Gabriele Raabe
Journal:  J Comput Aided Mol Des       Date:  2019-11-28       Impact factor: 3.686

6.  A new structural technique for examining ion-neutral association in aqueous solution.

Authors:  Philip E Mason; George W Neilson; David L Price; Marie-Louise Saboungi; John W Brady
Journal:  Faraday Discuss       Date:  2013       Impact factor: 4.008

7.  Derivation of fixed partial charges for amino acids accommodating a specific water model and implicit polarization.

Authors:  David S Cerutti; Julia E Rice; William C Swope; David A Case
Journal:  J Phys Chem B       Date:  2013-02-18       Impact factor: 2.991

8.  ff14ipq: A Self-Consistent Force Field for Condensed-Phase Simulations of Proteins.

Authors:  David S Cerutti; William C Swope; Julia E Rice; David A Case
Journal:  J Chem Theory Comput       Date:  2014-09-18       Impact factor: 6.006

9.  Dipole Moment and Binding Energy of Water in Proteins from Crystallographic Analysis.

Authors:  A Morozenko; I V Leontyev; A A Stuchebrukhov
Journal:  J Chem Theory Comput       Date:  2014-09-15       Impact factor: 6.006

10.  Hybrid QM/MM study of FMO complex with polarized protein-specific charge.

Authors:  Xiangyu Jia; Ye Mei; John Z H Zhang; Yan Mo
Journal:  Sci Rep       Date:  2015-11-27       Impact factor: 4.379

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