Literature DB >> 25381566

Fast magic angle spinning NMR with heteronucleus detection for resonance assignments and structural characterization of fully protonated proteins.

Changmiao Guo1, Guangjin Hou, Xingyu Lu, Bernie O'Hare, Jochem Struppe, Tatyana Polenova.   

Abstract

Heteronucleus-detected dipolar based correlation spectroscopy is established for assignments of ¹H, ¹³C, and ¹⁵N resonances and structural analysis in fully protonated proteins. We demonstrate that ¹³C detected 3D experiments are highly efficient and permit assignments of the majority of backbone resonances, as shown in an 89-residue dynein light chain 8, LC8 protein. With these experiments, we have resolved many ambiguities that were persistent in our previous studies using moderate MAS frequencies and lacking the ¹H dimension. The availability of ¹H isotropic chemical shifts measured with the heteronucleus-detected fast-MAS experiments presented here is essential for the accurate determination of the ¹H CSA tensors, which provide very useful structural probe. Finally, our results indicate that ¹³C detection in fast-MAS HETCOR experiments may be advantageous compared with ¹H detection as it yields datasets of significantly higher resolution in the ¹³C dimension than the ¹H detected HETCOR versions.

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Year:  2014        PMID: 25381566      PMCID: PMC4282927          DOI: 10.1007/s10858-014-9870-y

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  33 in total

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Authors:  Dabeiba Marulanda; Maria Luisa Tasayco; Ann McDermott; Marcela Cataldi; Vilma Arriaran; Tatyana Polenova
Journal:  J Am Chem Soc       Date:  2004-12-22       Impact factor: 15.419

2.  Ultrahigh resolution in proton solid-state NMR spectroscopy at high levels of deuteration.

Authors:  Veniamin Chevelkov; Kristina Rehbein; Anne Diehl; Bernd Reif
Journal:  Angew Chem Int Ed Engl       Date:  2006-06-02       Impact factor: 15.336

Review 3.  Structure and dynamics of membrane proteins by magic angle spinning solid-state NMR.

Authors:  Ann McDermott
Journal:  Annu Rev Biophys       Date:  2009       Impact factor: 12.981

4.  Optimum levels of exchangeable protons in perdeuterated proteins for proton detection in MAS solid-state NMR spectroscopy.

Authors:  Umit Akbey; Sascha Lange; W Trent Franks; Rasmus Linser; Kristina Rehbein; Anne Diehl; Barth-Jan van Rossum; Bernd Reif; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2009-08-22       Impact factor: 2.835

5.  Sensitivity gains, linearity, and spectral reproducibility in nonuniformly sampled multidimensional MAS NMR spectra of high dynamic range.

Authors:  Christopher L Suiter; Sivakumar Paramasivam; Guangjin Hou; Shangjin Sun; David Rice; Jeffrey C Hoch; David Rovnyak; Tatyana Polenova
Journal:  J Biomol NMR       Date:  2014-04-22       Impact factor: 2.835

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

Review 7.  Multidimensional heteronuclear nuclear magnetic resonance of proteins.

Authors:  G M Clore; A M Gronenborn
Journal:  Methods Enzymol       Date:  1994       Impact factor: 1.600

8.  Resonance Assignments and Secondary Structure Analysis of Dynein Light Chain 8 by Magic Angle Spinning NMR Spectroscopy.

Authors:  Shangjin Sun; Andrew H Butterworth; Sivakumar Paramasivam; Si Yan; Christine M Lightcap; John C Williams; Tatyana Polenova
Journal:  Can J Chem       Date:  2011-08-04       Impact factor: 1.118

9.  Biochemical and structural characterization of the Pak1-LC8 interaction.

Authors:  Christine M Lightcap; Shangjin Sun; James D Lear; Ulrich Rodeck; Tatyana Polenova; John C Williams
Journal:  J Biol Chem       Date:  2008-07-23       Impact factor: 5.157

10.  13C direct detection experiments on the paramagnetic oxidized monomeric copper, zinc superoxide dismutase.

Authors:  Wolfgang Bermel; Ivano Bertini; Isabella C Felli; Rainer Kümmerle; Roberta Pierattelli
Journal:  J Am Chem Soc       Date:  2003-12-31       Impact factor: 15.419

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  4 in total

1.  ¹³C- and ¹H-detection under fast MAS for the study of poorly available proteins: application to sub-milligram quantities of a 7 trans-membrane protein.

Authors:  Hugh R W Dannatt; Garrick F Taylor; Krisztina Varga; Victoria A Higman; Marc-Philipp Pfeil; Lubica Asilmovska; Peter J Judge; Anthony Watts
Journal:  J Biomol NMR       Date:  2015-02-21       Impact factor: 2.835

2.  Magic angle spinning NMR spectroscopy: a versatile technique for structural and dynamic analysis of solid-phase systems.

Authors:  Tatyana Polenova; Rupal Gupta; Amir Goldbourt
Journal:  Anal Chem       Date:  2015-04-09       Impact factor: 6.986

3.  Analysis of local molecular motions of aromatic sidechains in proteins by 2D and 3D fast MAS NMR spectroscopy and quantum mechanical calculations.

Authors:  Piotr Paluch; Tomasz Pawlak; Agata Jeziorna; Julien Trébosc; Guangjin Hou; Alexander J Vega; Jean-Paul Amoureux; Martin Dracinsky; Tatyana Polenova; Marek J Potrzebowski
Journal:  Phys Chem Chem Phys       Date:  2015-11-21       Impact factor: 3.676

4.  Nano-mole scale side-chain signal assignment by 1H-detected protein solid-state NMR by ultra-fast magic-angle spinning and stereo-array isotope labeling.

Authors:  Songlin Wang; Sudhakar Parthasarathy; Yusuke Nishiyama; Yuki Endo; Takahiro Nemoto; Kazuo Yamauchi; Tetsuo Asakura; Mitsuhiro Takeda; Tsutomu Terauchi; Masatsune Kainosho; Yoshitaka Ishii
Journal:  PLoS One       Date:  2015-04-09       Impact factor: 3.240

  4 in total

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