Literature DB >> 25379075

Tilted post arrays for separating long DNA.

Joel D P Thomas1, Kevin D Dorfman1.   

Abstract

Recent simulations by Chen and Dorfman [Electrophoresis 35, 405-411 (2014)] suggested that "tilting" the electric field with respect to the lattice vectors of a hexagonal post array would lead to a substantial improvement in electrophoretic DNA separations therein. We constructed such an array where the electric field is applied at an angle equidistant between the two lattice vectors. This tilted array leads to (i) baseline resolution of 20 kbp DNA and λ DNA (48.5 kbp) in a 4 mm channel and (ii) measurable separation resolutions for electric fields up to 50 V/cm, both of which are improvements over untilted post arrays of the same post density. The predicted time required to reach a resolution of unity is approximately 5 min, independent of electric field. The separations are more reproducible at higher fields.

Year:  2014        PMID: 25379075      PMCID: PMC4162435          DOI: 10.1063/1.4884521

Source DB:  PubMed          Journal:  Biomicrofluidics        ISSN: 1932-1058            Impact factor:   2.800


  36 in total

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Authors:  Jongyoon Han; Harold G Craighead
Journal:  Anal Chem       Date:  2002-01-15       Impact factor: 6.986

2.  Tilted brownian ratchet for DNA analysis.

Authors:  Lotien Richard Huang; Edward C Cox; Robert H Austin; James C Sturm
Journal:  Anal Chem       Date:  2003-12-15       Impact factor: 6.986

3.  Continuous particle separation through deterministic lateral displacement.

Authors:  Lotien Richard Huang; Edward C Cox; Robert H Austin; James C Sturm
Journal:  Science       Date:  2004-05-14       Impact factor: 47.728

4.  Quantitative microfluidic separation of DNA in self-assembled magnetic matrixes.

Authors:  Nicolas Minc; Claus Fütterer; Kevin D Dorfman; Aurélien Bancaud; Charlie Gosse; Cécile Goubault; Jean-Louis Viovy
Journal:  Anal Chem       Date:  2004-07-01       Impact factor: 6.986

5.  DNA electrodiffusion in a 2D array of posts.

Authors: 
Journal:  Phys Rev Lett       Date:  1994-03-28       Impact factor: 9.161

6.  Onset of channeling during DNA electrophoresis in a sparse ordered post array.

Authors:  Jia Ou; Samuel J Carpenter; Kevin D Dorfman
Journal:  Biomicrofluidics       Date:  2010-01-07       Impact factor: 2.800

7.  Effect of disorder on DNA electrophoresis in a microfluidic array of obstacles.

Authors:  Aruna Mohan; Patrick S Doyle
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-10-24

8.  Transport and collision dynamics in periodic asymmetric obstacle arrays: rational design of microfluidic rare-cell immunocapture devices.

Authors:  Jason P Gleghorn; James P Smith; Brian J Kirby
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2013-09-26

9.  DNA electrophoresis in a sparse ordered post array.

Authors:  Jia Ou; Jaeseol Cho; Daniel W Olson; Kevin D Dorfman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-06-04

10.  DNA manipulation and separation in sublithographic-scale nanowire array.

Authors:  Takao Yasui; Sakon Rahong; Koki Motoyama; Takeshi Yanagida; Qiong Wu; Noritada Kaji; Masaki Kanai; Kentaro Doi; Kazuki Nagashima; Manabu Tokeshi; Masateru Taniguchi; Satoyuki Kawano; Tomoji Kawai; Yoshinobu Baba
Journal:  ACS Nano       Date:  2013-03-21       Impact factor: 15.881

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  1 in total

Review 1.  Capillary electrophoresis applied to DNA: determining and harnessing sequence and structure to advance bioanalyses (2009-2014).

Authors:  Brandon C Durney; Cassandra L Crihfield; Lisa A Holland
Journal:  Anal Bioanal Chem       Date:  2015-05-03       Impact factor: 4.142

  1 in total

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