Literature DB >> 25373681

Interactive notebooks: Sharing the code.

Helen Shen.   

Abstract

Mesh：

Year:  2014        PMID： 25373681     DOI： 10.1038/515151a

Source DB:  PubMed          Journal:  Nature        ISSN： 0028-0836            Impact factor:   49.962


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  40 in total

1.  Photon-HDF5: An Open File Format for Timestamp-Based Single-Molecule Fluorescence Experiments.

Authors:  Antonino Ingargiola; Ted Laurence; Robert Boutelle; Shimon Weiss; Xavier Michalet
Journal:  Biophys J       Date:  2016-01-05       Impact factor: 4.033

2.  TREMOR12: An Open-Source Mobile App for Tremor Quantification.

Authors:  Pieter L Kubben; Mark L Kuijf; Linda P C M Ackermans; Albert F G Leentjens; Yasin Temel
Journal:  Stereotact Funct Neurosurg       Date:  2016-07-09       Impact factor: 1.875

3.  MOLNs: A CLOUD PLATFORM FOR INTERACTIVE, REPRODUCIBLE, AND SCALABLE SPATIAL STOCHASTIC COMPUTATIONAL EXPERIMENTS IN SYSTEMS BIOLOGY USING PyURDME.

Authors:  Brian Drawert; Michael Trogdon; Salman Toor; Linda Petzold; Andreas Hellander
Journal:  SIAM J Sci Comput       Date:  2016-06-01       Impact factor: 2.373

4.  How to catch a cloud.

Authors:  Nadia Drake
Journal:  Nature       Date:  2015-06-04       Impact factor: 49.962

5.  Programming: Pick up Python.

Authors:  Jeffrey M Perkel
Journal:  Nature       Date:  2015-02-05       Impact factor: 49.962

6.  Photon-HDF5: Open Data Format and Computational Tools for Timestamp-based Single-Molecule Experiments.

Authors:  Antonino Ingargiola; Ted Laurence; Robert Boutelle; Shimon Weiss; Xavier Michalet
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2016-03-01

7.  Developing a framework for digital objects in the Big Data to Knowledge (BD2K) commons: Report from the Commons Framework Pilots workshop.

Authors:  Kathleen M Jagodnik; Simon Koplev; Sherry L Jenkins; Lucila Ohno-Machado; Benedict Paten; Stephan C Schurer; Michel Dumontier; Ruben Verborgh; Alex Bui; Peipei Ping; Neil J McKenna; Ravi Madduri; Ajay Pillai; Avi Ma'ayan
Journal:  J Biomed Inform       Date:  2017-05-10       Impact factor: 6.317

8.  Neurophysiological analytics for all! Free open-source software tools for documenting, analyzing, visualizing, and sharing using electronic notebooks.

Authors:  David M Rosenberg; Charles C Horn
Journal:  J Neurophysiol       Date:  2016-04-20       Impact factor: 2.714

9.  EFO-LCI: A New Life Cycle Inventory Database of Forestry Operations in Europe.

Authors:  Giuseppe Cardellini; Tatiana Valada; Claire Cornillier; Estelle Vial; Marian Dragoi; Venceslas Goudiaby; Volker Mues; Bruno Lasserre; Arkadiusz Gruchala; Per Kristian Rørstad; Mathias Neumann; Miroslav Svoboda; Risto Sirgmets; Olli-Pekka Näsärö; Frits Mohren; Wouter M J Achten; Liesbet Vranken; Bart Muys
Journal:  Environ Manage       Date:  2018-03-20       Impact factor: 3.266

10.  Biomedical Image Processing with Containers and Deep Learning: An Automated Analysis Pipeline: Data architecture, artificial intelligence, automated processing, containerization, and clusters orchestration ease the transition from data acquisition to insights in medium-to-large datasets.

Authors:  Germán González; Conor L Evans
Journal:  Bioessays       Date:  2019-05-16       Impact factor: 4.345
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