| Literature DB >> 25373204 |
Hui Li1, Aijun Zhang2, Li-Zhen Chen3, Guoan Zhang3, Man-Qun Wang4.
Abstract
A high-quality cDNA library was constructed from female and male antenna of the longhorned beetle, Batocera horsfieldi (Hope) (Coleoptera: Cerambycidae), a serious pest of Populus (Salicales: Salicaceae). The titer was approximately 2.37 × 106 pfu/mL, and this complies with the test requirement. From the libraries, 692 clones were selected randomly, sequenced, and further analyzed, and the recombinational efficiency reached 93.85%. By alignment and cluster analysis, we identified four odorant binding proteins, two pheromone-binding proteins (have the characteristic six conserved cysteine residues), four Minus-C odorant binding proteins (lost two conserved cysteines), and three chemosensory proteins. In this study, we describe the identification and characterization of four new cDNAs that encode Minus-C odorant binding proteins (Minus-C OBPs) from B. horsfieldi antennal cDNA libraries. Our investigation focused on the expression pattern of the Minus-C OBP genes in various tissues in both sexes at different developmental stages, using reverse transcription PCR (RT-PCR) and realtime PCR (qPCR) strategies. Minus-C OBP1, 2, and 3 were expressed in all tested tissues, with the exception of the head (without antenna, labial palps, and maxillary palps). Minus-C OBP4 was expressed in the antenna, legs, and abdomen, but not in the labial palps, maxillary palps, or head. The qPCR results revealed MinusC OBPs were expressed in the antenna throughout the adult life, and that the transcript levels of these genes depended on the sex, age, and mating status of adults. This is an open access paper. We use the Creative Commons Attribution 3.0 license that permits unrestricted use, provided that the paper is properly attributed.Entities:
Keywords: Antennal cDNA library; Minus-C OBPs; RT-PCR; qPCR
Mesh:
Substances:
Year: 2014 PMID: 25373204 PMCID: PMC4207511 DOI: 10.1093/jis/14.1.57
Source DB: PubMed Journal: J Insect Sci ISSN: 1536-2442 Impact factor: 1.857
Special primers designed for expression analysis of the OBPs in Batocera horsfieldi
Figure 1.Cluster of orthologous groups of proteins (COG) classification of unigenes in the antennal cDNA library of Batocera horsfieldi . High quality figures are available online.
Figure 2.Alignment of predicted amino acid sequences of Minus-C OBPs from the antennal cDNA library with homologous proteins from other insect species (GenBank BLASTP). Predicted signal peptide sequences are boxed; four conserved Cys residues are marked by asterisks; the deletion of the second and the fifth conserved Cys are labeled by enclosing them in rectangles. Sequences used in alignment and accession numbers are Minus-C OBP1 Batocera horsfieldi : ADD70030; Minus-C OBP2 B. horsfieldi : ADD70031; Minus-C OBP3 B. horsfieldi : ADD82416; Minus-C OBP4 B. horsfieldi : ADD82417; Aaeg OBP56a Aedes aegypti : XP_001658810; Aaeg OBP56e A. aegypti : XP_001655717; Aaeg OBP56e putative A. aegypti : XP_001655721; Agam OBP Anopheles gambiae : XP_320225; Agam OBP23 A. gambiae : XP_320226; Amel OBP13 Apis mellifera : NP_001035314; Apis OBP10 Acyrthosiphon pisum : NP_001153525; Cqui GOBP56d Culex quinquefasciatus : XP_001863135; Cqui OBP C. quinquefasciatus : XP_001863132; Cqui OBP56a C. quinquefasciatus : XP_001848933; Hobl OBP1 Holotrichia oblita : ACX32050; Hpic OBP-1 Heptophylla picea : BAC07270; Malt OBP1 Monochamus alternatus : ABR53888; Msex ABP3 Mandu-ca sexta : AAL60413; Rpal OBP2 Rhynchophorus palmarum : AAD31875; RpalOBP2' R. palmarum : AAD31883; RpalOBP4' R. palmarum : AAQ96921; Tcas OBP08 Tribolium castaneum : EFA04687; Tcas OBP C16 precursor T. castaneum : NP_001137375. High quality figures are available online.
BLAST analysis and prediction of physical chemistry properties of Minus-OBPs.
Note: ORF, open reading frame; pI, isoelectric point; MW, molecular weight; Cleavage site, most likely cleavage site position of signal peptide; E-value, the statistical significance of reported matches; Max ident, the maximum identities of amino acid between Minus-OBP and other insect homologous gene; Species, source species of homologous gene by BLASTX; Protein ID, the accession number of homologs on NCBI; T.mol , Tenebrio molitor ; M.alt , Monochamus alternates ; T.cas, Tribolium castaneum .
Figure 3.Phylogenetic tree analysis of Batocera horsfieldi OBPs (Minus-C OBPs) and other insect species based on amino acid sequence. All OBPs are from the alignment analysis of Figure 2 . The tree was constructed using the neighbor-joining method. Numbers on branches show values of 1500 times replication bootstrap analysis. High quality figures are available online.
Figure 4.Tissue-specific distribution of Minus-C OBPs. RT-PCRs were performed using cDNAs isolated and synthesized from the different tissues of mated male Batocera horsfieldi, five days after eclosion, to examine the expression patterns in the various tissues. Amplification products were analyzed on agarose gel and visualized by UV illumination after staining with ethidium bromide. The PCrproducts were 135 bp in size for Minus-C OBP1, 120 bp for Minus-C OBP2, 127 bp for Minus-C OBP3, 132 bp for Minus-C OBP4, and 112 bp for 18s rRNA (control). Lanes correspond to cDNA or control template derived from: At, antenna; Lp, labial palp; Mp, maxillary palp; H, head (devoid of antennae, labial palps and maxillary palps); FL, foreleg; ML, mid leg; HL, hind leg; MAb, mid abdomen; HAb, hind abdomen; W, wing; control, no template (negative control) to ensure the specificity of the amplification. Amplification of the expressed 18S rRNA cDNA provides an additional positive control for the quality of each cDNA template pool. High quality figures are available online.
Figure 5.Relative quantity of Minus-C OBPs transcripts expressed from antenna of mated and unmated male and female mature adults by qPCR (mean ± SEM). High quality figures are available online.