| Literature DB >> 29662070 |
Débora Pires Paula1, Roberto Coiti Togawa2, Marcos Mota do Carmo Costa2, Priscila Grynberg2, Natália Florêncio Martins2, David Alan Andow3.
Abstract
Constitutive expression of Odorant-Binding Proteins (OBPs) in antennae and other body parts has been examined mainly to infer their involvement in insect olfaction, while their regulation in response to semiochemical stimuli has remained poorly known. Previous studies of semiochemical response were basically done using electrophysiology, which integrates the response of the set of OBPs present in an antenna or sensillum, without revealing the regulation of OBPs or which ones might be involved. In this study we used boll weevil as a model and mined its OBPs by RNA-Seq to study their simultaneous antennal expression by qPCR under controlled semiochemical stimuli with aggregation pheromone and plant volatiles. In the absence of a semiochemical stimulus, 23 of 24 OBPs were constitutively expressed in the antenna in both sexes. Semiochemicals changed systemically the expression of OBPs in both sexes. There were different patterns of up- and down-regulation in female antennae for each semiochemical stimulus, consistent with female chemical ecology. On the other hand, the only response in males was down-regulation of some OBPs. We suggest that these systemic changes in OBP expression might be related to enhancing detection of the semiochemical stimuli and/or priming the olfactory system to detect other environmental chemicals.Entities:
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Year: 2018 PMID: 29662070 PMCID: PMC5902564 DOI: 10.1038/s41598-018-24297-z
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Odorant-Binding Protein transcripts identified in Anthonomus grandis.
| Gene name | Search tool | Accession number | Completeness | Best Blastx hit | |||||
|---|---|---|---|---|---|---|---|---|---|
| Protein | Species | Query coverage (%) | Identity (%) | E-value | Accession number | ||||
| AgraOBP1 | Blast2GO | MF186622 | Missing 5′ and 3′ | OBP |
| 100 | 49 | 6e-31 | AMK48596.1 |
| AgraOBP2 | Blast2GO | KY826455 | full-length | OBP2 |
| 80 | 52 | 5e-58 | AGI05158.1 |
| AgraOBP3 | Blast2GO | KY826456 | full-length | OBP9 |
| 97 | 47 | 4e-37 | AKK25135.1 |
| AgraOBP4 | Blast2GO | KY826457 | full-length | OBP4 |
| 97 | 40 | 1e-44 | AGI05167.1 |
| AgraOBP5 | Blast2GO | KY826458 | full-length | OBP |
| 84 | 77 | 5e-67 | AHE13793.1 |
| AgraOBP6 | Blast2GO | KY826459 | full-length | OBP2 |
| 96 | 71 | 2e-66 | AIY61045.1 |
| AgraOBP7 | Blast2GO | KY826460 | full-length | OBP13 |
| 78 | 33 | 3e-16 | ALM64971.1 |
| AgraOBP8 | Blast2GO | KY826461 | full-length | OBP8 |
| 92 | 50 | 7e-40 | AGI05175.1 |
| AgraOBP9 | Blast2GO | KY826462 | full-length | OBP20 |
| 81 | 46 | 4e-31 | AKK25144.1 |
| AgraOBP10 | Blast2GO | KY826463 | full-length | PBP11 |
| 68 | 43 | 2e-23 | APG79372.1 |
| AgraOBP11 | Blast2GO | MF186631 | Missing 5′ | OBP |
| 86 | 61 | 2e-31 | AHE13799.1 |
| AgraOBP12 | Blast2GO | KY826464 | full-length | OBP6 |
| 84 | 37 | 7e-17 | ANE37550.1 |
| AgraOBP13 | Blast2GO | KY826465 | full-length | OBP13 |
| 95 | 35 | 1e-20 | ALM64971.1 |
| AgraOBP14 | Blast2GO | KY826466 | full-length | PBP3 |
| 81 | 37 | 9e-21 | APG79364.1 |
| AgraOBP15 | Blast2GO | KY826467 | full-length | OBP13 |
| 86 | 30 | 8e-11 | ALM64971.1 |
| AgraOBP16 | Blast2GO | KY826468 | full-length | OBP19 |
| 87 | 62 | 1e-44 | AKK25143.1 |
| AgraOBP17 | InterPro | MF186632 | Missing 5′ and 3′ | PBP7 |
| 80 | 42 | 2e-12 | APG79368.1 |
| AgraOBP18 | InterPro | KY826469 | full-length | OBP6 |
| 73 | 37 | 6e-09 | AKK25134.1 |
| AgraOBP19 | InterPro | KY826470 | full-length | OBP8 |
| 61 | 24 | 0.002 | AIX97054.1 |
| AgraOBP20 | InterPro | MF186633 | Missing 5′ and 3′ | PBP17 |
| 72 | 49 | 7e-08 | APG79378.1 |
| AgraOBP21 | InterPro | KY826471 | full-length | OBP |
| 91 | 29 | 3e-06 | AHE13798.1 |
| AgraOBP22 | InterPro | MF186634 | Missing 5′ | OBP5 |
| 97 | 35 | 0.003 | ALM64967.1 |
| AgraOBP23 | InterPro | KY826472 | full-length | OBP6 |
| 82 | 41 | 3e-26 | AIX97052.1 |
| AgraGOBP1 | InterPro | MF186635 | Missing 5′ and 3′ | GOBP70 |
| 100 | 49 | 2e-16 | XP_019871740.1 |
Physicochemical predictions for the putative full-length AgraOBPs obtained from boll weevil.
| ID | AA | pI | SignalP | Conserved Cys | AA position of the InterPro domain |
|---|---|---|---|---|---|
| AgraOBP2 | 215 | 6.54 | No | Atypical | 70–142a; 77–153b |
| AgraOBP3 | 133 | 6.88 | 1–17 | Minus-C | 19–127a; 16–125b |
| AgraOBP4 | 191 | 5.51 | No | Minus-C | 1–65 and 80–181a; 1–63 and 76–181b |
| AgraOBP5 | 149 | 5.15 | 1–19 | 6 | 201–129a; 20–127b |
| AgraOBP6 | 135 | 4.58 | 1–18 | 6 | 22–133a; 24–126b |
| AgraOBP7 | 142 | 5.41 | 1–16 | Minus-C | 22–129a; 20–129b |
| AgraOBP8 | 146 | 4.65 | 1–21 | 6 | 6–140a; 21–133b |
| AgraOBP9 | 139 | 8.88 | 1–19 | Minus-C | 30–135a; 24–134b |
| AgraOBP10 | 162 | 6.19 | 1–16 | Minus-C | 32–136a; 29–135b |
| AgraOBP12 | 118 | 4.84 | 1–16 | Minus-C | 27–117a; 21–106b |
| AgraOBP13 | 136 | 5.63 | 1–18 | Minus-C | 22–131a; 20–130b |
| AgraOBP14 | 164 | 4.79 | 1–21 | Minus-C | 29–135a; 29–132b |
| AgraOBP15 | 105 | 6.82 | 1–16 | Minus-C | 8–95a; 20–98b |
| AgraOBP16 | 134 | 5.04 | 1–19 | Minus-C | 19–130a; 20–126b |
| AgraOBP18 | 133 | 5.29 | 1–19 | Minus-C | 55–123a |
| AgraOBP19 | 141 | 4.83 | 1–23 | 6 | 39–135a; 42–135b |
| AgraOBP21 | 127 | 5.11 | 1–17 | Minus-C | 24–122a; 21–122b |
| AgraOBP23 | 138 | 6.08 | 1–16 | Minus-C | 23–135a; 20–124b |
AA: Amino acid; pI: Isoelectric point; Cys: cysteine; SignalP: signal peptide amino acid location. Six “Conserved Cys” is classical OBP. InterPro domains: IPR06170/PBP/GOBP (aSSF47565 Insect pheromone/odorant-binding proteins; bPFAM PF01395 PBP_GOBP).
Figure 1Alignment of the deduced amino acid sequences identified in the transcriptome of Anthonomus grandis. (A) Classical and atypical OBPs; (B) Minus-C OBPs. Similarity is scored by matrix Blosum62 where the black color indicates 100% similarity, darker grey 100% > similarity ≥ 80%, lighter grey 80% > similarity ≥ 60% and white color similarity < 60%. The sequence logo is at the top of the alignment. The conserved Cys are indicated by sequence logo.
Figure 2Expression of AgraOBP transcripts in antennae compared to legs in female (F) and male (M) control boll weevils. Expression is the fold-increase in log10 relative fluorescence units (N0) obtained by qPCR, with standard error bars. * are effects where there was no expression in legs or both antennae and legs.
Figure 3Response of AgraOBP transcripts expression to semiochemical stimuli. Plant leaf volatile compounds were combined in n-hexane (1 μL each/25 μL solution). G1: GOBP1. Each number inside the symbols corresponds to an AgraOBP type. Responses are relative to controls. Red numbers means not quantifiable expression. All changes are significant at p < 0.01. Boll weevil illustration was created by Tracey Saxby (IAN/UMCES, http://ian.umces.edu/imagelibrary/displayimage-4270.html).