Literature DB >> 25372819

Cloning, expression, purification, crystallization and preliminary X-ray characterization of allantoinase from Bacillus licheniformis ATCC 14580.

Mayte Conejero-Muriel1, Ana Isabel Martínez-Gómez2, Sergio Martínez-Rodríguez3, Jose A Gavira1.   

Abstract

Allantoinase, a member of the amidohydrolase superfamily, exists in a wide variety of organisms, including bacteria, fungi, plants and a few animals, such as fishes and amphibians. Allantoinase catalyzes the reversible hydrolysis of allantoin into allantoate by hydrolytic cleavage of the N1-C2 amide bond of the five-membered hydantoin ring. Allantoinase from Bacillus licheniformis (AllBali) presents an inverted enantioselectivity towards allantoin (R-enantioselective), which is a distinguishable feature that is not observed for other allantoinases. In this work, B. licheniformis ATCC 14580 allantoinase (AllBali) containing a C-terminal His6 tag was overproduced in Escherichia coli and purified to homogeneity. Crystals of AllBali were obtained by the vapour-diffusion method using 0.1 M potassium thiocyanate, 20%(w/v) polyethylene glycol 3350 as a crystallization solution. X-ray diffraction data were collected to a resolution of 3.5 Å with an Rmerge of 29.2% from a crystal belonging to space group P12₁1, with unit-cell parameters a=54.93, b=164.74, c=106.89 Å, β=98.49°. There are four molecules in the asymmetric unit with a solvent content of 47% as estimated from the Matthews coefficient (VM=2.34 Å3 Da(-1)).

Entities:  

Keywords:  Bacillus licheniformis; allantoin; allantoinase; amidohydrolase

Mesh:

Substances:

Year:  2014        PMID: 25372819      PMCID: PMC4231854          DOI: 10.1107/S2053230X14021608

Source DB:  PubMed          Journal:  Acta Crystallogr F Struct Biol Commun        ISSN: 2053-230X            Impact factor:   1.056


  19 in total

1.  A new type of allantoinase in amphibian liver.

Authors:  W Masuda; S Fujiwara; T Noguchi
Journal:  Biosci Biotechnol Biochem       Date:  2001-11       Impact factor: 2.043

Review 2.  Divergent evolution of enzymatic function: mechanistically diverse superfamilies and functionally distinct suprafamilies.

Authors:  J A Gerlt; P C Babbitt
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

Review 3.  Microbial hydantoinases--industrial enzymes from the origin of life?

Authors:  C Syldatk; O May; J Altenbuchner; R Mattes; M Siemann
Journal:  Appl Microbiol Biotechnol       Date:  1999-03       Impact factor: 4.813

4.  Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases.

Authors:  Ileana Ramazzina; Laura Cendron; Claudia Folli; Rodolfo Berni; Daniela Monteverdi; Giuseppe Zanotti; Riccardo Percudani
Journal:  J Biol Chem       Date:  2008-06-12       Impact factor: 5.157

5.  An evolutionary treasure: unification of a broad set of amidohydrolases related to urease.

Authors:  L Holm; C Sander
Journal:  Proteins       Date:  1997-05

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Amphibian allantoinase. Molecular cloning, tissue distribution, and functional expression.

Authors:  S Hayashi; S Jain; R Chu; K Alvares; B Xu; F Erfurth; N Usuda; M S Rao; S K Reddy; T Noguchi
Journal:  J Biol Chem       Date:  1994-04-22       Impact factor: 5.157

8.  Insect allantoinase: cDNA cloning, purification, and characterization of the native protein from the cat flea, Ctenocephalides felis.

Authors:  Patrick J Gaines; Liang Tang; Nancy Wisnewski
Journal:  Insect Biochem Mol Biol       Date:  2004-03       Impact factor: 4.714

9.  Crystal structure of metal-dependent allantoinase from Escherichia coli.

Authors:  Kwangsoo Kim; Myung-Il Kim; Jiwoung Chung; Joong-Hoon Ahn; Sangkee Rhee
Journal:  J Mol Biol       Date:  2009-02-24       Impact factor: 5.469

10.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  1 in total

1.  Identification and Molecular Characterization of Genes Coding Pharmaceutically Important Enzymes from Halo-Thermo Tolerant Bacillus.

Authors:  Azam Safary; Rezvan Moniri; Maryam Hamzeh-Mivehroud; Siavoush Dastmalchi
Journal:  Adv Pharm Bull       Date:  2016-12-22
  1 in total

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