Literature DB >> 25362045

Intracellular metabolite levels shape sulfur isotope fractionation during microbial sulfate respiration.

Boswell A Wing1, Itay Halevy2.   

Abstract

We present a quantitative model for sulfur isotope fractionation accompanying bacterial and archaeal dissimilatory sulfate respiration. By incorporating independently available biochemical data, the model can reproduce a large number of recent experimental fractionation measurements with only three free parameters: (i) the sulfur isotope selectivity of sulfate uptake into the cytoplasm, (ii) the ratio of reduced to oxidized electron carriers supporting the respiration pathway, and (iii) the ratio of in vitro to in vivo levels of respiratory enzyme activity. Fractionation is influenced by all steps in the dissimilatory pathway, which means that environmental sulfate and sulfide levels control sulfur isotope fractionation through the proximate influence of intracellular metabolites. Although sulfur isotope fractionation is a phenotypic trait that appears to be strain specific, we show that it converges on near-thermodynamic behavior, even at micromolar sulfate levels, as long as intracellular sulfate reduction rates are low enough (<<1 fmol H2Scell(-1)⋅d(-1)).

Entities:  

Keywords:  dissimilatory sulfate reduction; flux–force relationship; sulfur isotope fractionation

Mesh:

Substances:

Year:  2014        PMID: 25362045      PMCID: PMC4280625          DOI: 10.1073/pnas.1407502111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

1.  Quantification of dissimilatory (bi)sulphite reductase gene expression in Desulfobacterium autotrophicum using real-time RT-PCR.

Authors:  Lev N Neretin; Axel Schippers; Annelie Pernthaler; Knut Hamann; Rudolf Amann; Bo Barker Jørgensen
Journal:  Environ Microbiol       Date:  2003-08       Impact factor: 5.491

Review 2.  Microbial life under extreme energy limitation.

Authors:  Tori M Hoehler; Bo Barker Jørgensen
Journal:  Nat Rev Microbiol       Date:  2013-02       Impact factor: 60.633

Review 3.  Why can't a cell grow infinitely fast?

Authors:  A L Koch
Journal:  Can J Microbiol       Date:  1988-04       Impact factor: 2.419

4.  Patterns of protein synthesis in E. coli: a catalog of the amount of 140 individual proteins at different growth rates.

Authors:  S Pedersen; P L Bloch; S Reeh; F C Neidhardt
Journal:  Cell       Date:  1978-05       Impact factor: 41.582

5.  STUDIES ON THERMOPHILIC SULFATE-REDUCING BACTERIA III. : Adenosine Triphosphate-sulfurylase of Clostridium nigrificans and Desulfovibrio desulfuricans.

Authors:  J M Akagi; L L Campbell
Journal:  J Bacteriol       Date:  1962-12       Impact factor: 3.490

6.  Variable expression of the nitrogen isotope effect associated with denitrification of nitrite.

Authors:  B A Bryan; G Shearer; J L Skeeters; D H Kohl
Journal:  J Biol Chem       Date:  1983-07-25       Impact factor: 5.157

7.  Boundary conditions for the Swain-Schaad relationship as a criterion for hydrogen tunneling.

Authors:  Amnon Kohen; Jan H Jensen
Journal:  J Am Chem Soc       Date:  2002-04-17       Impact factor: 15.419

8.  Spectroscopic properties of siroheme extracted from sulfite reductases.

Authors:  L Kang; J LeGall; A T Kowal; M K Johnson
Journal:  J Inorg Biochem       Date:  1987-08       Impact factor: 4.155

9.  Sulfur isotopes of organic matter preserved in 3.45-billion-year-old stromatolites reveal microbial metabolism.

Authors:  Tomaso R R Bontognali; Alex L Sessions; Abigail C Allwood; Woodward W Fischer; John P Grotzinger; Roger E Summons; John M Eiler
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-04       Impact factor: 11.205

10.  Sulfite oxidation in chlorobaculum tepidum.

Authors:  Jesse Rodriguez; Jennifer Hiras; Thomas E Hanson
Journal:  Front Microbiol       Date:  2011-05-23       Impact factor: 5.640

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  24 in total

1.  Sulfur isotope fractionation during the evolutionary adaptation of a sulfate-reducing bacterium.

Authors:  André Pellerin; Luke Anderson-Trocmé; Lyle G Whyte; Grant M Zane; Judy D Wall; Boswell A Wing
Journal:  Appl Environ Microbiol       Date:  2015-02-06       Impact factor: 4.792

2.  Predictive isotope model connects microbes in culture and nature.

Authors:  Shuhei Ono; Min Sub Sim; Tanja Bosak
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-05       Impact factor: 11.205

3.  A productivity collapse to end Earth's Great Oxidation.

Authors:  Malcolm S W Hodgskiss; Peter W Crockford; Yongbo Peng; Boswell A Wing; Tristan J Horner
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-12       Impact factor: 11.205

4.  Carbon Isotope Fractionation during Catabolism and Anabolism in Acetogenic Bacteria Growing on Different Substrates.

Authors:  Christoph Freude; Martin Blaser
Journal:  Appl Environ Microbiol       Date:  2016-04-18       Impact factor: 4.792

5.  Novel sulfur isotope analyses constrain sulfurized porewater fluxes as a minor component of marine dissolved organic matter.

Authors:  Alexandra A Phillips; Margot E White; Michael Seidel; Fenfang Wu; Frank F Pavia; Preston C Kemeny; Audrey C Ma; Lihini I Aluwihare; Thorsten Dittmar; Alex L Sessions
Journal:  Proc Natl Acad Sci U S A       Date:  2022-10-06       Impact factor: 12.779

6.  A transient peak in marine sulfate after the 635-Ma snowball Earth.

Authors:  Yongbo Peng; Huiming Bao; Ganqing Jiang; Peter Crockford; Dong Feng; Shuhai Xiao; Alan Jay Kaufman; Jiasheng Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-02       Impact factor: 12.779

7.  Mass-Transfer-Limited Biodegradation at Low Concentrations-Evidence from Reactive Transport Modeling of Isotope Profiles in a Bench-Scale Aquifer.

Authors:  Fengchao Sun; Adrian Mellage; Mehdi Gharasoo; Aileen Melsbach; Xin Cao; Ralf Zimmermann; Christian Griebler; Martin Thullner; Olaf A Cirpka; Martin Elsner
Journal:  Environ Sci Technol       Date:  2021-05-10       Impact factor: 9.028

8.  Electron carriers in microbial sulfate reduction inferred from experimental and environmental sulfur isotope fractionations.

Authors:  Christine B Wenk; Boswell A Wing; Itay Halevy
Journal:  ISME J       Date:  2017-10-31       Impact factor: 11.217

9.  Expanded Genomic Sampling Refines Current Understanding of the Distribution and Evolution of Sulfur Metabolisms in the Desulfobulbales.

Authors:  Lewis M Ward; Emma Bertran; David T Johnston
Journal:  Front Microbiol       Date:  2021-05-19       Impact factor: 5.640

10.  Sedimentary pyrite sulfur isotopes track the local dynamics of the Peruvian oxygen minimum zone.

Authors:  Virgil Pasquier; David A Fike; Itay Halevy
Journal:  Nat Commun       Date:  2021-07-20       Impact factor: 14.919

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