Literature DB >> 25360356

Remote focal scanning optical projection tomography with an electrically tunable lens.

Lingling Chen1, Sunil Kumar1, Douglas Kelly2, Natalie Andrews2, Margaret J Dallman3, Paul M W French1, James McGinty1.   

Abstract

We describe a remote focal scanning technique for optical projection tomography (OPT) implemented with an electrically tunable lens (ETL) that removes the need to scan the specimen or objective lens. Using a 4× objective lens the average spatial resolution is improved by ∼46% and the light collection efficiency by a factor of ∼6.76, thereby enabling increased acquisition speed and reduced light dose. This convenient implementation is particularly appropriate for lower magnifications and larger sample diameters where axial objective scanning would encounter problems with speed and stability.

Entities:  

Keywords:  (170.6900) Three-dimensional microscopy; (170.6960) Tomography

Year:  2014        PMID: 25360356      PMCID: PMC4206308          DOI: 10.1364/BOE.5.003367

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  24 in total

1.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

2.  Focusing optics of a parallel beam CCD optical tomography apparatus for 3D radiation gel dosimetry.

Authors:  Nikola Krstajić; Simon J Doran
Journal:  Phys Med Biol       Date:  2006-04-03       Impact factor: 3.609

3.  Three-dimensional imaging of single isolated cell nuclei using optical projection tomography.

Authors:  Mark Fauver; Eric Seibel; J Richard Rahn; Michael Meyer; Florence Patten; Thomas Neumann; Alan Nelson
Journal:  Opt Express       Date:  2005-05-30       Impact factor: 3.894

4.  High-resolution three-dimensional imaging of islet-infiltrate interactions based on optical projection tomography assessments of the intact adult mouse pancreas.

Authors:  Tomas Alanentalo; Christina E Lorén; Asa Larefalk; James Sharpe; Dan Holmberg; Ulf Ahlgren
Journal:  J Biomed Opt       Date:  2008 Sep-Oct       Impact factor: 3.170

5.  Rapid 3D light-sheet microscopy with a tunable lens.

Authors:  Florian O Fahrbach; Fabian F Voigt; Benjamin Schmid; Fritjof Helmchen; Jan Huisken
Journal:  Opt Express       Date:  2013-09-09       Impact factor: 3.894

6.  Neuroanatomical phenotyping of the mouse brain with three-dimensional autofluorescence imaging.

Authors:  Jacqueline A Gleave; Michael D Wong; Jun Dazai; Maliha Altaf; R Mark Henkelman; Jason P Lerch; Brian J Nieman
Journal:  Physiol Genomics       Date:  2012-06-19       Impact factor: 3.107

7.  Optical projection tomography as a tool for 3D microscopy and gene expression studies.

Authors:  James Sharpe; Ulf Ahlgren; Paul Perry; Bill Hill; Allyson Ross; Jacob Hecksher-Sørensen; Richard Baldock; Duncan Davidson
Journal:  Science       Date:  2002-04-19       Impact factor: 47.728

8.  Anatomical and gene expression mapping of the ventral pallium in a three-dimensional model of developing human brain.

Authors:  S Lindsay; S Sarma; M Martínez-de-la-Torre; J Kerwin; M Scott; J Luis Ferran; R Baldock; L Puelles
Journal:  Neuroscience       Date:  2005       Impact factor: 3.590

9.  In vivo fluorescence lifetime optical projection tomography.

Authors:  James McGinty; Harriet B Taylor; Lingling Chen; Laurence Bugeon; Jonathan R Lamb; Margaret J Dallman; Paul M W French
Journal:  Biomed Opt Express       Date:  2011-04-26       Impact factor: 3.732

10.  3 dimensional modelling of early human brain development using optical projection tomography.

Authors:  Janet Kerwin; Mark Scott; James Sharpe; Luis Puelles; Stephen C Robson; Margaret Martínez-de-la-Torre; Jose Luis Ferran; Guangjie Feng; Richard Baldock; Tom Strachan; Duncan Davidson; Susan Lindsay
Journal:  BMC Neurosci       Date:  2004-08-06       Impact factor: 3.288

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  9 in total

1.  Miniaturized fiber-coupled confocal fluorescence microscope with an electrowetting variable focus lens using no moving parts.

Authors:  Baris N Ozbay; Justin T Losacco; Robert Cormack; Richard Weir; Victor M Bright; Juliet T Gopinath; Diego Restrepo; Emily A Gibson
Journal:  Opt Lett       Date:  2015-06-01       Impact factor: 3.776

2.  Volumetric structured illumination microscopy enabled by a tunable-focus lens.

Authors:  Taylor Hinsdale; Bilal H Malik; Cory Olsovsky; Javier A Jo; Kristen C Maitland
Journal:  Opt Lett       Date:  2015-11-01       Impact factor: 3.776

3.  Mesoscopic in vivo 3-D tracking of sparse cell populations using angular multiplexed optical projection tomography.

Authors:  Lingling Chen; Yuriy Alexandrov; Sunil Kumar; Natalie Andrews; Margaret J Dallman; Paul M W French; James McGinty
Journal:  Biomed Opt Express       Date:  2015-03-12       Impact factor: 3.732

4.  Visualising apoptosis in live zebrafish using fluorescence lifetime imaging with optical projection tomography to map FRET biosensor activity in space and time.

Authors:  Natalie Andrews; Marie-Christine Ramel; Sunil Kumar; Yuriy Alexandrov; Douglas J Kelly; Sean C Warren; Louise Kerry; Nicola Lockwood; Antonina Frolov; Paul Frankel; Laurence Bugeon; James McGinty; Margaret J Dallman; Paul M W French
Journal:  J Biophotonics       Date:  2016-01-11       Impact factor: 3.207

5.  OPTiM: Optical projection tomography integrated microscope using open-source hardware and software.

Authors:  Thomas Watson; Natalie Andrews; Samuel Davis; Laurence Bugeon; Margaret D Dallman; James McGinty
Journal:  PLoS One       Date:  2017-07-11       Impact factor: 3.240

6.  Three-dimensional bright-field microscopy with isotropic resolution based on multi-view acquisition and image fusion reconstruction.

Authors:  Gianmaria Calisesi; Alessia Candeo; Andrea Farina; Cosimo D'Andrea; Vittorio Magni; Gianluca Valentini; Anna Pistocchi; Alex Costa; Andrea Bassi
Journal:  Sci Rep       Date:  2020-07-29       Impact factor: 4.379

7.  Gaussian Light Model in Brightfield Optical Projection Tomography.

Authors:  Olli Koskela; Toni Montonen; Birhanu Belay; Edite Figueiras; Sampsa Pursiainen; Jari Hyttinen
Journal:  Sci Rep       Date:  2019-09-26       Impact factor: 4.379

8.  Optical projection tomography as a quantitative tool for analysis of cell morphology and density in 3D hydrogels.

Authors:  Birhanu Belay; Janne T Koivisto; Jenny Parraga; Olli Koskela; Toni Montonen; Minna Kellomäki; Edite Figueiras; Jari Hyttinen
Journal:  Sci Rep       Date:  2021-03-22       Impact factor: 4.379

9.  Convolutional neural networks for reconstruction of undersampled optical projection tomography data applied to in vivo imaging of zebrafish.

Authors:  Samuel P X Davis; Sunil Kumar; Yuriy Alexandrov; Ajay Bhargava; Gabriela da Silva Xavier; Guy A Rutter; Paul Frankel; Erik Sahai; Seth Flaxman; Paul M W French; James McGinty
Journal:  J Biophotonics       Date:  2019-08-29       Impact factor: 3.390

  9 in total

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