Literature DB >> 25359503

Proteomic approaches in research of cyanobacterial photosynthesis.

Natalia Battchikova1, Martina Angeleri2, Eva-Mari Aro2.   

Abstract

Oxygenic photosynthesis in cyanobacteria, algae, and plants is carried out by a fabulous pigment-protein machinery that is amazingly complicated in structure and function. Many different approaches have been undertaken to characterize the most important aspects of photosynthesis, and proteomics has become the essential component in this research. Here we describe various methods which have been used in proteomic research of cyanobacteria, and demonstrate how proteomics is implemented into on-going studies of photosynthesis in cyanobacterial cells.

Entities:  

Keywords:  Cyanobacteria; Mass spectrometry; Photosynthesis; Post-translational modification; Protein identification; Protein quantitation; Proteomics

Mesh:

Substances:

Year:  2014        PMID: 25359503     DOI: 10.1007/s11120-014-0050-4

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  216 in total

Review 1.  Protein identification by mass spectrometry: issues to be considered.

Authors:  Michael A Baldwin
Journal:  Mol Cell Proteomics       Date:  2003-11-06       Impact factor: 5.911

Review 2.  Shotgun proteomics using the iTRAQ isobaric tags.

Authors:  Kunal Aggarwal; Leila H Choe; Kelvin H Lee
Journal:  Brief Funct Genomic Proteomic       Date:  2006-05-10

3.  Protein labeling by iTRAQ: a new tool for quantitative mass spectrometry in proteome research.

Authors:  Sebastian Wiese; Kai A Reidegeld; Helmut E Meyer; Bettina Warscheid
Journal:  Proteomics       Date:  2007-02       Impact factor: 3.984

Review 4.  Analytical strategies for phosphoproteomics.

Authors:  Tine E Thingholm; Ole N Jensen; Martin R Larsen
Journal:  Proteomics       Date:  2009-03       Impact factor: 3.984

5.  From proteins to proteomes: large scale protein identification by two-dimensional electrophoresis and amino acid analysis.

Authors:  M R Wilkins; C Pasquali; R D Appel; K Ou; O Golaz; J C Sanchez; J X Yan; A A Gooley; G Hughes; I Humphery-Smith; K L Williams; D F Hochstrasser
Journal:  Biotechnology (N Y)       Date:  1996-01

6.  Segregation of nitrogen fixation and oxygenic photosynthesis in the marine cyanobacterium Trichodesmium.

Authors:  I Berman-Frank; P Lundgren; Y B Chen; H Küpper; Z Kolber; B Bergman; P Falkowski
Journal:  Science       Date:  2001-11-16       Impact factor: 47.728

7.  Comparison of protein and peptide prefractionation methods for the shotgun proteomic analysis of Synechocystis sp. PCC 6803.

Authors:  Chee Sian Gan; Kenneth F Reardon; Phillip C Wright
Journal:  Proteomics       Date:  2005-06       Impact factor: 3.984

8.  Proteomic analysis of heterotrophy in Synechocystis sp. PCC 6803.

Authors:  Dominic Kurian; Tove Jansèn; Pirkko Mäenpää
Journal:  Proteomics       Date:  2006-03       Impact factor: 3.984

Review 9.  Assembling and maintaining the Photosystem II complex in chloroplasts and cyanobacteria.

Authors:  Josef Komenda; Roman Sobotka; Peter J Nixon
Journal:  Curr Opin Plant Biol       Date:  2012-03-03       Impact factor: 7.834

10.  Proteome-wide post-translational modification statistics: frequency analysis and curation of the swiss-prot database.

Authors:  George A Khoury; Richard C Baliban; Christodoulos A Floudas
Journal:  Sci Rep       Date:  2011-09-13       Impact factor: 4.379

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  4 in total

1.  Chlorosis as a Developmental Program in Cyanobacteria: The Proteomic Fundament for Survival and Awakening.

Authors:  Philipp Spät; Alexander Klotz; Sascha Rexroth; Boris Maček; Karl Forchhammer
Journal:  Mol Cell Proteomics       Date:  2018-05-30       Impact factor: 5.911

Review 2.  The Use of Advanced Mass Spectrometry to Dissect the Life-Cycle of Photosystem II.

Authors:  Daniel A Weisz; Michael L Gross; Himadri B Pakrasi
Journal:  Front Plant Sci       Date:  2016-05-10       Impact factor: 5.753

3.  Hydrodynamic conditions affect the proteomic profile of marine biofilms formed by filamentous cyanobacterium.

Authors:  Maria J Romeu; Dany Domínguez-Pérez; Daniela Almeida; João Morais; Mário J Araújo; Hugo Osório; Alexandre Campos; Vítor Vasconcelos; Filipe J Mergulhão
Journal:  NPJ Biofilms Microbiomes       Date:  2022-10-17       Impact factor: 8.462

4.  Effects of Clinical Wastewater on the Bacterial Community Structure from Sewage to the Environment.

Authors:  Ilse Verburg; H Pieter J van Veelen; Karola Waar; John W A Rossen; Alex W Friedrich; Lucia Hernández Leal; Silvia García-Cobos; Heike Schmitt
Journal:  Microorganisms       Date:  2021-03-31
  4 in total

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