Literature DB >> 25356532

New mutations in the RAB28 gene in 2 Spanish families with cone-rod dystrophy.

Rosa Riveiro-Álvarez1, Yajing Angela Xie2, Miguel-Ángel López-Martínez1, Tomasz Gambin3, Raquel Pérez-Carro1, Almudena Ávila-Fernández1, María-Isabel López-Molina4, Jana Zernant2, Shalini Jhangiani3, Donna Muzny5, Bo Yuan3, Eric Boerwinkle5, Richard Gibbs6, James R Lupski6, Carmen Ayuso1, Rando Allikmets7.   

Abstract

IMPORTANCE: The families evaluated in this study represent the second report of cone-rod dystrophy (CRD) cases caused by mutations in RAB28, a recently discovered gene associated with CRD.
OBJECTIVE: To determine the disease-causing gene in 2 families of Spanish descent presenting with CRD who do not have ABCA4 mutations. DESIGN, SETTING, AND PARTICIPANTS: Molecular genetics and observational case studies of 2 families, each with 1 affected proband with CRD and 3 or 5 unaffected family members. The affected individual from each family received a complete ophthalmic examination including assessment of refractive errors and best-corrected visual acuity, biomicroscopy, color fundus photography, electroretinography analysis, and visual-evoked potential analysis. After complete sequencing of the ABCA4 gene with negative results, the screening for disease-causing mutations was performed by whole-exome sequencing. Possible disease-associated variants were determined by filtering based on minor allele frequency, predicted pathogenicity, and segregation analysis in all family members. MAIN OUTCOMES AND MEASURES: The appearance of the macula was evaluated by clinical examination, fundus photography, and fundus autofluorescence imaging, and visual function was assessed by electroretinography. Disease-causing mutations were assessed by sequence analyses.
RESULTS: Ophthalmologic findings included markedly reduced visual acuity, bull's eye maculopathy, foveal hyperpigmentation, peripapillary atrophy, dyschromatopsia, extinguished photopic responses, and reduced scotopic responses observed on electroretinography consistent with the CRD phenotype often associated with ABCA4 mutations. Although no ABCA4 mutations were detected in either patient, whole-exome sequencing analysis identified 2 new homozygous mutations in the recently described RAB28 gene, the c.172 + 1G>C splice site variant in IVS2 and the missense c.T651G:p.C217W substitution. Both variants were determined as deleterious by predictive programs and were segregated with the disease in both families. Sequencing of 107 additional patients of Spanish descent with CRD did not reveal other cases with RAB28 mutations. CONCLUSIONS AND RELEVANCE: Deleterious mutations in RAB28 result in a classic CRD phenotype and are an infrequent cause of CRD in the Spanish population.

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Year:  2015        PMID: 25356532      PMCID: PMC4351871          DOI: 10.1001/jamaophthalmol.2014.4266

Source DB:  PubMed          Journal:  JAMA Ophthalmol        ISSN: 2168-6165            Impact factor:   7.389


  21 in total

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Authors:  Michael F Marmor; Graham E Holder; Mathias W Seeliger; Shuichi Yamamoto
Journal:  Doc Ophthalmol       Date:  2004-03       Impact factor: 2.379

2.  MutationTaster evaluates disease-causing potential of sequence alterations.

Authors:  Jana Marie Schwarz; Christian Rödelsperger; Markus Schuelke; Dominik Seelow
Journal:  Nat Methods       Date:  2010-08       Impact factor: 28.547

3.  ISCEV standard for clinical electro-oculography (2010 update).

Authors:  Michael F Marmor; Mitchell G Brigell; Daphne L McCulloch; Carol A Westall; Michael Bach
Journal:  Doc Ophthalmol       Date:  2011-02-05       Impact factor: 2.379

4.  Exome sequencing and cis-regulatory mapping identify mutations in MAK, a gene encoding a regulator of ciliary length, as a cause of retinitis pigmentosa.

Authors:  Rıza Köksal Ozgül; Anna M Siemiatkowska; Didem Yücel; Connie A Myers; Rob W J Collin; Marijke N Zonneveld; Avigail Beryozkin; Eyal Banin; Carel B Hoyng; L Ingeborgh van den Born; Ron Bose; Wei Shen; Dror Sharon; Frans P M Cremers; B Jeroen Klevering; Anneke I den Hollander; Joseph C Corbo
Journal:  Am J Hum Genet       Date:  2011-08-12       Impact factor: 11.025

5.  Analysis of the ABCA4 gene by next-generation sequencing.

Authors:  Jana Zernant; Carl Schubert; Kate M Im; Tomas Burke; Carolyn M Brown; Gerald A Fishman; Stephen H Tsang; Peter Gouras; Michael Dean; Rando Allikmets
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-10-31       Impact factor: 4.799

6.  Autosomal recessive retinitis pigmentosa and cone-rod dystrophy caused by splice site mutations in the Stargardt's disease gene ABCR.

Authors:  F P Cremers; D J van de Pol; M van Driel; A I den Hollander; F J van Haren; N V Knoers; N Tijmes; A A Bergen; K Rohrschneider; A Blankenagel; A J Pinckers; A F Deutman; C B Hoyng
Journal:  Hum Mol Genet       Date:  1998-03       Impact factor: 6.150

7.  Exome sequencing identifies NMNAT1 mutations as a cause of Leber congenital amaurosis.

Authors:  Pei-Wen Chiang; Juan Wang; Yang Chen; Quan Fu; Jing Zhong; Yanhua Chen; Xin Yi; Renhua Wu; Haixue Gan; Yong Shi; Yanling Chen; Christopher Barnett; Dianna Wheaton; Megan Day; Joanne Sutherland; Elise Heon; Richard G Weleber; Luis Alexandre Rassi Gabriel; Peikuan Cong; KuangHsiang Chuang; Sheng Ye; Juliana Maria Ferraz Sallum; Ming Qi
Journal:  Nat Genet       Date:  2012-07-29       Impact factor: 38.330

8.  Alternative mRNA splicing of the novel GTPase Rab28 generates isoforms with different C-termini.

Authors:  A Brauers; A Schürmann; S Massmann; P Mühl-Zürbes; W Becker; H Kainulainen; C Lie; H G Joost
Journal:  Eur J Biochem       Date:  1996-05-01

9.  A method and server for predicting damaging missense mutations.

Authors:  Ivan A Adzhubei; Steffen Schmidt; Leonid Peshkin; Vasily E Ramensky; Anna Gerasimova; Peer Bork; Alexey S Kondrashov; Shamil R Sunyaev
Journal:  Nat Methods       Date:  2010-04       Impact factor: 28.547

Review 10.  Cone rod dystrophies.

Authors:  Christian P Hamel
Journal:  Orphanet J Rare Dis       Date:  2007-02-01       Impact factor: 4.123

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  16 in total

1.  Frequent hypomorphic alleles account for a significant fraction of ABCA4 disease and distinguish it from age-related macular degeneration.

Authors:  Jana Zernant; Winston Lee; Frederick T Collison; Gerald A Fishman; Yuri V Sergeev; Kaspar Schuerch; Janet R Sparrow; Stephen H Tsang; Rando Allikmets
Journal:  J Med Genet       Date:  2017-04-26       Impact factor: 6.318

Review 2.  Retinal dystrophies, genomic applications in diagnosis and prospects for therapy.

Authors:  Benjamin M Nash; Dale C Wright; John R Grigg; Bruce Bennetts; Robyn V Jamieson
Journal:  Transl Pediatr       Date:  2015-04

3.  The small GTPase RAB28 is required for phagocytosis of cone outer segments by the murine retinal pigmented epithelium.

Authors:  Guoxin Ying; Karsten Boldt; Marius Ueffing; Cecilia D Gerstner; Jeanne M Frederick; Wolfgang Baehr
Journal:  J Biol Chem       Date:  2018-09-18       Impact factor: 5.157

4.  Whole-Organism Developmental Expression Profiling Identifies RAB-28 as a Novel Ciliary GTPase Associated with the BBSome and Intraflagellar Transport.

Authors:  Victor L Jensen; Stephen Carter; Anna A W M Sanders; Chunmei Li; Julie Kennedy; Tiffany A Timbers; Jerry Cai; Noemie Scheidel; Breandán N Kennedy; Ryan D Morin; Michel R Leroux; Oliver E Blacque
Journal:  PLoS Genet       Date:  2016-12-08       Impact factor: 5.917

5.  Extremely hypomorphic and severe deep intronic variants in the ABCA4 locus result in varying Stargardt disease phenotypes.

Authors:  Jana Zernant; Winston Lee; Takayuki Nagasaki; Frederick T Collison; Gerald A Fishman; Mette Bertelsen; Thomas Rosenberg; Peter Gouras; Stephen H Tsang; Rando Allikmets
Journal:  Cold Spring Harb Mol Case Stud       Date:  2018-08-01

6.  Complex inheritance of ABCA4 disease: four mutations in a family with multiple macular phenotypes.

Authors:  Winston Lee; Yajing Xie; Jana Zernant; Bo Yuan; Srilaxmi Bearelly; Stephen H Tsang; James R Lupski; Rando Allikmets
Journal:  Hum Genet       Date:  2015-11-02       Impact factor: 5.881

7.  Small GTPases Rab8a and Rab11a Are Dispensable for Rhodopsin Transport in Mouse Photoreceptors.

Authors:  Guoxin Ying; Cecilia D Gerstner; Jeanne M Frederick; Sanford L Boye; William W Hauswirth; Wolfgang Baehr
Journal:  PLoS One       Date:  2016-08-16       Impact factor: 3.240

Review 8.  Insight into the molecular genetics of myopia.

Authors:  Jiali Li; Qingjiong Zhang
Journal:  Mol Vis       Date:  2017-12-31       Impact factor: 2.367

Review 9.  Rab GTPases in cilium formation and function.

Authors:  Oliver E Blacque; Noemie Scheidel; Stefanie Kuhns
Journal:  Small GTPases       Date:  2017-10-26

10.  A Missense Mutation in RAB28 in a Family with Cone-Rod Dystrophy and Postaxial Polydactyly Prevents Localization of RAB28 to the Primary Cilium.

Authors:  Cathrine Jespersgaard; Amalie Brunbjerg Hey; Tomas Ilginis; Tina Duelund Hjortshøj; Mingyan Fang; Mette Bertelsen; Niels Bech; Hanne Jensen; Lasse Jonsgaard Larsen; Zeynep Tümer; Thomas Rosenberg; Karen Brøndum-Nielsen; Lisbeth Birk Møller; Karen Grønskov
Journal:  Invest Ophthalmol Vis Sci       Date:  2020-02-07       Impact factor: 4.799

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