Literature DB >> 25356025

Recent advances in molecular diagnostics of hepatitis B virus.

Sibnarayan Datta1, Soumya Chatterjee1, Vijay Veer1.   

Abstract

Hepatitis B virus (HBV) is one of the important global health problems today. Infection with HBV can lead to a variety of clinical manifestations including severe hepatic complications like liver cirrhosis and hepatocellular carcinoma. Presently, routine HBV screening and diagnosis is primarily based on the immuno-detection of HBV surface antigen (HBsAg). However, identification of HBV DNA positive cases, who do not have detectable HBsAg has greatly encouraged the use of nucleic acid amplification based assays, that are highly sensitive, specific and are to some extent tolerant to sequence variation. In the last few years, the field of HBV molecular diagnostics has evolved rapidly with advancements in the molecular biology tools, such as polymerase chain reaction (PCR) and real-time PCR. Recently, apart of PCR based amplification methods, a number of isothermal amplification assays, such as loop mediated isothermal amplification, transcription mediated amplification, ligase chain reaction, and rolling circle amplification have been utilized for HBV diagnosis. These assays also offer options for real time detection and integration into biosensing devices. In this manuscript, we review the molecular technologies that are presently available for HBV diagnostics, with special emphasis on isothermal amplification based technologies. We have also included the recent trends in the development of biosensors and use of next generation sequencing technologies for HBV.

Entities:  

Keywords:  Biosensors; Hepatitis B virus; Isothermal amplification; Next generation sequencing; Polymerase chain reaction; Real time polymerase chain reaction

Mesh:

Substances:

Year:  2014        PMID: 25356025      PMCID: PMC4209528          DOI: 10.3748/wjg.v20.i40.14615

Source DB:  PubMed          Journal:  World J Gastroenterol        ISSN: 1007-9327            Impact factor:   5.742


  92 in total

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Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Development and assessment of a novel real-time PCR assay for quantitation of HBV DNA.

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3.  Real-time nucleic acid sequence-based amplification in nanoliter volumes.

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4.  Rapid PCR in a continuous flow device.

Authors:  Masahiko Hashimoto; Pin-Chuan Chen; Michael W Mitchell; Dimitris E Nikitopoulos; Steven A Soper; Michael C Murphy
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5.  Prospective evaluation of BDProbeTec strand displacement amplification (SDA) system for diagnosis of tuberculosis in non-respiratory and respiratory samples.

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Journal:  J Med Microbiol       Date:  2004-12       Impact factor: 2.472

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Authors:  Anna S F Lok; Brian J McMahon
Journal:  Hepatology       Date:  2007-02       Impact factor: 17.425

Review 7.  Molecular diagnosis of viral hepatitis.

Authors:  Jean-Michel Pawlotsky
Journal:  Gastroenterology       Date:  2002-05       Impact factor: 22.682

8.  Hybridization assay of hepatitis B virus by QCM peptide nucleic acid biosensor.

Authors:  Chunyan Yao; Tangyou Zhu; Jin Tang; Rong Wu; Qinghai Chen; Ming Chen; Bo Zhang; Junfu Huang; Weiling Fu
Journal:  Biosens Bioelectron       Date:  2007-09-14       Impact factor: 10.618

9.  Rolling circle amplification, a powerful tool for genetic and functional studies of complete hepatitis B virus genomes from low-level infections and for directly probing covalently closed circular DNA.

Authors:  Séverine Margeridon; Sandra Carrouée-Durantel; Isabelle Chemin; Luc Barraud; Fabien Zoulim; Christian Trépo; Alan Kay
Journal:  Antimicrob Agents Chemother       Date:  2008-07-07       Impact factor: 5.191

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Authors:  Rodney M Ratcliff; Grace Chang; TuckWeng Kok; Theo P Sloots
Journal:  Curr Issues Mol Biol       Date:  2007-07       Impact factor: 2.081

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  13 in total

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2.  The Role of Affordable, Point-of-Care Technologies for Cancer Care in Low- and Middle-Income Countries: A Review and Commentary.

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Journal:  IEEE J Transl Eng Health Med       Date:  2017-11-23       Impact factor: 3.316

3.  Optical Whole-Genome Restriction Mapping as a Tool for Rapidly Distinguishing and Identifying Bacterial Contaminants in Clinical Samples.

Authors:  Richard R Chapleau; James C Baldwin
Journal:  J Clin Diagn Res       Date:  2015-08-01

Review 4.  Diagnosis of hepatitis B.

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Journal:  Ann Transl Med       Date:  2016-09

5.  Development of sensitive and specific loop-mediated isothermal amplification combined with lateral flow device for the rapid detection of hepatitis B virus infection.

Authors:  Soumendra Nath Maity; Revathi Poonati; Rudrama Devi Punati; Pratyusha Mallepaddi; Yogyata Marothi; Prudhvi Chand Mallepaddi
Journal:  Braz J Microbiol       Date:  2022-02-17       Impact factor: 2.214

Review 6.  Rapid and quantitative detection of hepatitis B virus.

Authors:  Yue-Ping Liu; Chun-Yan Yao
Journal:  World J Gastroenterol       Date:  2015-11-14       Impact factor: 5.742

Review 7.  Update on hepatitis B and C virus diagnosis.

Authors:  Livia Melo Villar; Helena Medina Cruz; Jakeline Ribeiro Barbosa; Cristianne Sousa Bezerra; Moyra Machado Portilho; Letícia de Paula Scalioni
Journal:  World J Virol       Date:  2015-11-12

Review 8.  Advances in ligase chain reaction and ligation-based amplifications for genotyping assays: Detection and applications.

Authors:  Abdullah A Gibriel; Ola Adel
Journal:  Mutat Res Rev Mutat Res       Date:  2017-05-02       Impact factor: 5.657

9.  Sophisticated viral quasispecies with a genotype-related pattern of mutations in the hepatitis B X gene of HBeAg-ve chronically infected patients.

Authors:  Maria Francesca Cortese; Carolina González; Josep Gregori; Rosario Casillas; Luca Carioti; Mercedes Guerrero-Murillo; Mar Riveiro-Barciela; Cristina Godoy; Sara Sopena; Marçal Yll; Josep Quer; Ariadna Rando; Rosa Lopez-Martinez; Beatriz Pacín Ruiz; Selene García-García; Rafael Esteban-Mur; David Tabernero; Maria Buti; Francisco Rodríguez-Frías
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Review 10.  Current concepts in the prevention of pathogen transmission via blood/plasma-derived products for bleeding disorders.

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Journal:  Blood Rev       Date:  2015-07-20       Impact factor: 8.250

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