Literature DB >> 25355316

RING finger protein 4 (RNF4) derepresses gene expression from DNA methylation.

Yu Wang1.   

Abstract

RNF4 is an E3 ubiquitin ligase originally identified as a transcription co-activator. The mechanism by which RNF4 promotes transcription remains unclear. In this study, I found that RNF4 antagonizes transcriptional repression mediated by DNA methylation. RNF4 does not promote DNA demethylation, but mediates the ubiquitination of MeCP2, a methyl-CpG-binding domain (MBD) protein. Removal of MeCP2 from gene promoters activates transcription. This study thus not only uncovers how RNF4 functions as a transcription activator, but also reveals the mechanism by which MeCP2 protein stability is regulated.
© 2014 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  DNA Methylation; Methyl CpG-binding Protein 2 (MeCP2); Protein Turnover; RING Finger Protein 4 (RNF4); Transcription; Ubiquitylation (Ubiquitination)

Mesh:

Substances:

Year:  2014        PMID: 25355316      PMCID: PMC4256315          DOI: 10.1074/jbc.C114.611558

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  21 in total

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Journal:  Genes Dev       Date:  2002-01-01       Impact factor: 11.361

2.  MBD family proteins: reading the epigenetic code.

Authors:  Mehrnaz Fatemi; Paul A Wade
Journal:  J Cell Sci       Date:  2006-08-01       Impact factor: 5.285

3.  Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription.

Authors:  P L Jones; G J Veenstra; P A Wade; D Vermaak; S U Kass; N Landsberger; J Strouboulis; A P Wolffe
Journal:  Nat Genet       Date:  1998-06       Impact factor: 38.330

4.  Regulation of TET protein stability by calpains.

Authors:  Yu Wang; Yi Zhang
Journal:  Cell Rep       Date:  2014-01-09       Impact factor: 9.423

5.  Identification of RING finger protein 4 (RNF4) as a modulator of DNA demethylation through a functional genomics screen.

Authors:  Xiaoyi V Hu; Tânia M A Rodrigues; Haiyan Tao; Robert K Baker; Loren Miraglia; Anthony P Orth; Gary E Lyons; Peter G Schultz; Xu Wu
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-09       Impact factor: 11.205

6.  Identification of a novel RING finger protein as a coregulator in steroid receptor-mediated gene transcription.

Authors:  A M Moilanen; H Poukka; U Karvonen; M Häkli; O A Jänne; J J Palvimo
Journal:  Mol Cell Biol       Date:  1998-09       Impact factor: 4.272

7.  Mild overexpression of MeCP2 causes a progressive neurological disorder in mice.

Authors:  Ann L Collins; Jonathan M Levenson; Alexander P Vilaythong; Ronald Richman; Dawna L Armstrong; Jeffrey L Noebels; J David Sweatt; Huda Y Zoghbi
Journal:  Hum Mol Genet       Date:  2004-09-06       Impact factor: 6.150

8.  Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.

Authors:  Mamta Tahiliani; Kian Peng Koh; Yinghua Shen; William A Pastor; Hozefa Bandukwala; Yevgeny Brudno; Suneet Agarwal; Lakshminarayan M Iyer; David R Liu; L Aravind; Anjana Rao
Journal:  Science       Date:  2009-04-16       Impact factor: 47.728

9.  RNF4 is a poly-SUMO-specific E3 ubiquitin ligase required for arsenic-induced PML degradation.

Authors:  Michael H Tatham; Marie-Claude Geoffroy; Linnan Shen; Anna Plechanovova; Neil Hattersley; Ellis G Jaffray; Jorma J Palvimo; Ronald T Hay
Journal:  Nat Cell Biol       Date:  2008-04-13       Impact factor: 28.824

10.  A partial loss of function allele of methyl-CpG-binding protein 2 predicts a human neurodevelopmental syndrome.

Authors:  Rodney C Samaco; John D Fryer; Jun Ren; Sharyl Fyffe; Hsiao-Tuan Chao; Yaling Sun; John J Greer; Huda Y Zoghbi; Jeffrey L Neul
Journal:  Hum Mol Genet       Date:  2008-03-04       Impact factor: 6.150

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Authors:  Shivakumar Subbanna; Nagaraja N Nagre; Madhu Shivakumar; Vikram Joshi; Delphine Psychoyos; Abdullah Kutlar; Nagavedi S Umapathy; Balapal S Basavarajappa
Journal:  Front Mol Neurosci       Date:  2018-02-20       Impact factor: 5.639

2.  DNA binding by the MATα2 transcription factor controls its access to alternative ubiquitin-modification pathways.

Authors:  Christopher M Hickey; Yang Xie; Mark Hochstrasser
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Review 4.  SUMO-Targeted Ubiquitin Ligases and Their Functions in Maintaining Genome Stability.

Authors:  Ya-Chu Chang; Marissa K Oram; Anja-Katrin Bielinsky
Journal:  Int J Mol Sci       Date:  2021-05-20       Impact factor: 5.923

Review 5.  MeCP2 and the enigmatic organization of brain chromatin. Implications for depression and cocaine addiction.

Authors:  Juan Ausió
Journal:  Clin Epigenetics       Date:  2016-05-21       Impact factor: 6.551

Review 6.  The Biology of SUMO-Targeted Ubiquitin Ligases in Drosophila Development, Immunity, and Cancer.

Authors:  Mona Abed; Eliya Bitman-Lotan; Amir Orian
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