Literature DB >> 25350848

From a 2DE-gel spot to protein function: lesson learned from HS1 in chronic lymphocytic leukemia.

Benedetta Apollonio1, Maria Teresa Sabrina Bertilaccio2, Umberto Restuccia3, Pamela Ranghetti2, Federica Barbaglio2, Paolo Ghia4, Federico Caligaris-Cappio4, Cristina Scielzo5.   

Abstract

The identification of molecules involved in tumor initiation and progression is fundamental for understanding disease's biology and, as a consequence, for the clinical management of patients. In the present work we will describe an optimized proteomic approach for the identification of molecules involved in the progression of Chronic Lymphocytic Leukemia (CLL). In detail, leukemic cell lysates are resolved by 2-dimensional Electrophoresis (2DE) and visualized as "spots" on the 2DE gels. Comparative analysis of proteomic maps allows the identification of differentially expressed proteins (in terms of abundance and post-translational modifications) that are picked, isolated and identified by Mass Spectrometry (MS). The biological function of the identified candidates can be tested by different assays (i.e. migration, adhesion and F-actin polymerization), that we have optimized for primary leukemic cells.

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Year:  2014        PMID: 25350848      PMCID: PMC4353291          DOI: 10.3791/51942

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  18 in total

1.  ProFound: an expert system for protein identification using mass spectrometric peptide mapping information.

Authors:  W Zhang; B T Chait
Journal:  Anal Chem       Date:  2000-06-01       Impact factor: 6.986

Review 2.  The ongoing evolution of proteomics in malignancy.

Authors:  Amit S Dhamoon; Elise C Kohn; Nilofer S Azad
Journal:  Drug Discov Today       Date:  2007-08-24       Impact factor: 7.851

Review 3.  Novel insights in chronic lymphocytic leukemia: are we getting closer to understanding the pathogenesis of the disease?

Authors:  Federico Caligaris-Cappio; Paolo Ghia
Journal:  J Clin Oncol       Date:  2008-07-28       Impact factor: 44.544

4.  Lymphocytes, B lymphocytes, and clonal CLL cells: observations on the impact of the new diagnostic criteria in the 2008 Guidelines for Chronic Lymphocytic Leukemia (CLL).

Authors:  Christopher S Mulligan; Miriam E Thomas; Stephen P Mulligan
Journal:  Blood       Date:  2009-06-18       Impact factor: 22.113

Review 5.  How the microenvironment wires the natural history of chronic lymphocytic leukemia.

Authors:  Federico Caligaris-Cappio; Maria T S Bertilaccio; Cristina Scielzo
Journal:  Semin Cancer Biol       Date:  2013-07-02       Impact factor: 15.707

6.  Ig V gene mutation status and CD38 expression as novel prognostic indicators in chronic lymphocytic leukemia.

Authors:  R N Damle; T Wasil; F Fais; F Ghiotto; A Valetto; S L Allen; A Buchbinder; D Budman; K Dittmar; J Kolitz; S M Lichtman; P Schulman; V P Vinciguerra; K R Rai; M Ferrarini; N Chiorazzi
Journal:  Blood       Date:  1999-09-15       Impact factor: 22.113

7.  Improved silver staining protocols for high sensitivity protein identification using matrix-assisted laser desorption/ionization-time of flight analysis.

Authors:  E Mortz; T N Krogh; H Vorum; A Görg
Journal:  Proteomics       Date:  2001-11       Impact factor: 3.984

8.  Proteome study of human cerebrospinal fluid following traumatic brain injury indicates fibrin(ogen) degradation products as trauma-associated markers.

Authors:  Antonio Conti; Yovan Sanchez-Ruiz; Angela Bachi; Luigi Beretta; Elisabetta Grandi; Massimiliano Beltramo; Massimo Alessio
Journal:  J Neurotrauma       Date:  2004-07       Impact factor: 5.269

9.  Identification of clinically relevant protein targets in prostate cancer with 2D-DIGE coupled mass spectrometry and systems biology network platform.

Authors:  Ramesh Ummanni; Frederike Mundt; Heike Pospisil; Simone Venz; Christian Scharf; Christine Barett; Maria Fälth; Jens Köllermann; Reinhard Walther; Thorsten Schlomm; Guido Sauter; Carsten Bokemeyer; Holger Sültmann; A Schuppert; Tim H Brümmendorf; Stefan Balabanov
Journal:  PLoS One       Date:  2011-02-11       Impact factor: 3.240

10.  Proteomic analysis of B-cell receptor signaling in chronic lymphocytic leukaemia reveals a possible role for kininogen.

Authors:  Elena Kashuba; Gina L Eagle; James Bailey; Paul Evans; Kevin J Welham; David Allsup; Lynn Cawkwell
Journal:  J Proteomics       Date:  2013-08-11       Impact factor: 4.044

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  2 in total

1.  Establishment and Characterization of PCL12, a Novel CD5+ Chronic Lymphocytic Leukaemia Cell Line.

Authors:  Andreas Agathangelidis; Lydia Scarfò; Federica Barbaglio; Benedetta Apollonio; Maria Teresa Sabrina Bertilaccio; Pamela Ranghetti; Maurilio Ponzoni; Gabriella Leone; Valeria De Pascali; Lorenza Pecciarini; Paolo Ghia; Federico Caligaris-Cappio; Cristina Scielzo
Journal:  PLoS One       Date:  2015-06-25       Impact factor: 3.240

2.  3D-STED Super-Resolution Microscopy Reveals Distinct Nanoscale Organization of the Hematopoietic Cell-Specific Lyn Substrate-1 (HS1) in Normal and Leukemic B Cells.

Authors:  Marta Sampietro; Moreno Zamai; Alfonsa Díaz Torres; Veronica Labrador Cantarero; Federica Barbaglio; Lydia Scarfò; Cristina Scielzo; Valeria R Caiolfa
Journal:  Front Cell Dev Biol       Date:  2021-06-30
  2 in total

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