| Literature DB >> 25349506 |
Chih-Wei Huang1, Yen-Chen Lee2, Si-Min Lin1, Wen-Lung Wu2.
Abstract
Aegistasubchinensis (Möllendorff, 1884) is a widely distributed land snail species with morphological variation and endemic to Taiwan. Three genetic markers (partial sequence of the mitochondrial cytochrome c oxidase subunit I [COI], the 16S rDNA and the nuclear internal transcribed spacer 2 [ITS2]) were analysed to infer phylogenetic relationships and genetic divergence of closely related species of the genus Aegista, Aegistavermis (Reeve, 1852) and Aegistaoculus (Pfeiffer, 1850). A new species from Aegistasubchinensis has been recognized on the basis of phylogenetic and morphological evidences. The nominal new species, Aegistadiversifamilia sp. n. is distinguished from Aegistasubchinensis (Möllendorff, 1884) by its larger shell size, aperture and apex angle; wider umbilicus and flatter shell shape. The northernmost distribution of Aegistadiversifamilia sp. n. is limited by the Lanyang River, which is presumed to mark the geographic barrier between Aegistadiversifamilia sp. n. and Aegistasubchinensis.Entities:
Keywords: Helicoidea; Southern Ryukyu Islands; Stylommatophora; Yaeyama Islands; new species
Year: 2014 PMID: 25349506 PMCID: PMC4205739 DOI: 10.3897/zookeys.445.7778
Source DB: PubMed Journal: Zookeys ISSN: 1313-2970 Impact factor: 1.546
Figure 2.Maximum likelihood phylogeny and sampling sites of spp. Reconstructed phylogeny was based on concatenated sequences of mitochondrial COI, 16S and nuclear ITS2 genes. Branch support confidences of clades are shown in bootstrap, approximate likelihood-ratio test and Bayesian posterior probability, respectively. The log likelihood of maximum likelihood tree = -6584.1713. The numbered sampling sites are detailed in Table 1.
Sampling information and GenBank accession number of DNA sequences
| GPS coordinates | Sample size | GenBank accession number | ||||||
|---|---|---|---|---|---|---|---|---|
| Sampling locality | Latitude | Longitude | Altitude | NG | NM | COI | 16S | ITS2 |
| # Wulai, Taipei | NA. | NA. | NA. | 1 | 0 | NA. | ||
| 1. Linmei Shipan Trail, Jiaoxi Twp., I-Lan Co., Taiwan | 286 | 2 | 2 | |||||
| 2. Houtong, Ruifang District, New Taipei City, Taiwan | 105 | 0 | 3 | NA. | NA. | NA. | ||
| 3. Zhishanyan, Taipei City, Taiwan | 53 | 3 | 5 | |||||
| 4. Datieliao Trail, Daxi Twp., Taoyuan City, Taiwan | 433 | 0 | 1 | NA. | NA. | NA. | ||
| 5. Shimen Reservoir 1, Daxi Twp., Taoyuan City, Taiwan | 323 | 0 | 5 | NA. | NA. | NA. | ||
| 6. Shimen Reservoir 2, Daxi Twp., Taoyuan City, Taiwan | 198 | 0 | 1 | NA. | NA. | NA. | ||
| 7. Frog Rock, Jianshi Twp., Hsinchu Co., Taiwan | 468 | 0 | 5 | NA. | NA. | NA. | ||
| 8. Fuxing Coal Mine, Jianshi Twp., Hsinchu Co., Taiwan | 512 | 0 | 1 | NA. | NA. | NA. | ||
| 9. Jinping, Jianshi Twp., Hsinchu Co., Taiwan | 638 | 0 | 1 | NA. | NA. | NA. | ||
| 10. Shishan Trail, Nanzhuang Twp., Miaoli Co., Taiwan | 344 | 0 | 5 | NA. | NA. | NA. | ||
| 11. Fengmei, Nanzhuang Twp., Miaoli Co., Taiwan | 695 | 0 | 2 | NA. | NA. | NA. | ||
| 12. Dacaopai, Sanyi Twp., Miaoli Co., Taiwan | 523 | 0 | 3 | NA. | NA. | NA. | ||
| 13. Wu Shi Branch School, Heping District, Taichung City, Taiwan | 650 | 0 | 1 | NA. | NA. | NA. | ||
| 14. Wushikeng, Heping District, Taichung City, Taiwan | 894 | 2 | 0 | NA. | NA. | |||
| 15. Huanshan, Heping District, Taichung City, Taiwan | 1560 | 2 | 1 | |||||
| 16. Anpingkeng, Dongshan Twp., I-Lan Co., Taiwan | 70 | 4 | 5 | |||||
| 17. Wushibi, Su'ao Twp., I-Lan Co., Taiwan | 382 | 1 | 0 | |||||
| 18. Chaoyang Trail, Nan'ao Twp., I-Lan Co., Taiwan | 42 | 0 | 2 | NA. | NA. | NA. | ||
| 19. Heren 1, Xiulin Twp., Hualien Co., Taiwan | 36 | 0 | 1 | NA. | NA. | NA. | ||
| 20. Heren 2, Xiulin Twp., Hualien Co., Taiwan | 55 | 0 | 7 | NA. | NA. | NA. | ||
| 21. Heren Trail, Xiulin Twp., Hualien Co., Taiwan | 50 | 5 | 1 | |||||
| 22. Jinwen Tunnel, Xiulin Twp., Hualien Co., Taiwan | 128 | 0 | 8 | NA. | NA. | NA. | ||
| 23. Northern Chongde Tunnel, Xiulin Twp., Hualien Co., Taiwan | 62 | 2 | 2 | NA. | ||||
| 24. Southern Chongde Tunnel, Xiulin Twp., Hualien Co., Taiwan | 56 | 3 | 5 | |||||
| 25. Sanjianwu, Xiulin Twp., Hualien Co., Taiwan | 165 | 0 | 6 | NA. | NA. | NA. | ||
| 26. Taroko Service Center, Xiulin Twp., Hualien Co., Taiwan | 100 | 0 | 6 | NA. | NA. | NA. | ||
| 27. Badagang, Xiulin Twp., Hualien Co., Taiwan | 421 | 5 | 0 | |||||
| # Miyako Island, Japan | NA. | NA. | NA. | 1 | 0 | NA. | ||
| 28. Shimozaki, Miyako Island, Japan | 32 | 3 | 0 | |||||
| 29. Hirara 1, Miyako Island, Japan | 42 | 1 | 0 | NA. | ||||
| 30. Hirara 2, Miyako Island, Japan | 44 | 3 | 0 | |||||
| 31. Shimozato, Miyako Island, Japan | 44 | 6 | 0 | |||||
| # IriomoteIsland, Japan | NA. | NA. | NA. | 1 | 0 | NA. | ||
| 32. Tozato, Ishigaki Island, Japan | 94 | 1 | 0 | NA. | ||||
| 33. Fukai, Ishigaki Island, Japan | 62 | 6 | 0 | |||||
| # Ishigaki Island, Japan | NA. | NA. | NA. | 1 | 0 | NA. | ||
| 34. Fuyang Park, Taipei City, Taiwan | 32 | 1 | 0 | |||||
| 35. Neiwan, Hengshan Twp., Hsinchu Co., Taiwan | 268 | 1 | 0 | |||||
| 36. Lanren Rd., Manzhou Twp., Pingtung Co., Taiwan | 48 | 1 | 0 | |||||
| 37. Gueishan Island, Taiwan | 157 | 1 | 0 | |||||
NG: Number of specimen for Genetic analyses; NM: Number of specimen for Morphological analyses; #: sequence obtained from Hirano et al. (2014); NA.: not available.
Figure 1.Morphometric measurement of shell size variation of sp. n. (shown in this figure) in top view, apertural view and umbilical view. AA: angle of apex; AH: aperture height; AW: aperture width; BH: body whorl height; FW: first whorl width; SBH: secondary body whorl height; SH: shell height; SW: shell width; UW: umbilicus width; 2W–6W: 2nd–6th whorl width.
Figure 3.Haplotype networks of mitochondrial COI, 16S and nuclear ITS2 genes. Species are presented by colors. Haplotype frequency is shown by the size of the circular. Name of haplotype is numbered and presented inside the circle. Haplotypes are connected by simple line represent one mutation between haplotypes. Number of mutations between haplotypes are shown in square. Red dots are missing or hypothetical haplotypes.
Interspecific divergence and intraspecific polymorphism of spp. from COI, 16S and ITS2 genes.
| 0.007/0.005/0.002 | ||||
| 0.075/0.036/0.015 | 0.002/0.008/0.004 | |||
| 0.067/0.051/0.014 | 0.064/0.034/0.007 | 0.023/0.014/0.004 | ||
| 0.085/0.037/0.016 | 0.065/0.038/0.009 | 0.059/0.042/0.008 | 0.024/0.012/0.004 |
Figure 4.Genital morphology of A sp. n. and B . Scale bar = 1 cm. A: atrium; AG: albumen gland; AS: accessory-sac of auxiliary copulatory organ; BC: bursa copulatory; DS: dart-sac of auxiliary copulatory organ; E: epiphallus; EF: epiphallial flagellum; FO: free oviduct; HD: hermaphroditic duct; M: gland of the auxiliary copulatory organ; P: penis; PBC: pedunculus of bursa copulatory; PR: penis retractor; SOD: spermoviduct; V: vagina; VD: vas deferens.
Measurements for genital morphology of and sp. n. The measurements are scaled by shell width, (1.9 cm, collected from Zhishanyan, Taipei City) and sp. n. (2.3 cm, collected from Heren 1, Xiulin Township, Hualien County)
| Measurement | HD | AG | SOD | FO | V | DS | P | E | EF |
|---|---|---|---|---|---|---|---|---|---|
| 0.77 | 0.24 | 1.05 | 0.20 | 0.20 | 0.23 | 0.34 | 0.32 | 0.29 | |
| 0.73 | 0.88 | 1.38 | 0.22 | 0.33 | 0.45 | 0.33 | 0.45 | 0.57 | |
| HD/AG | AG/SOD | HD/SOD | FO/V | EF/E | E/P | P/V | |||
| 3.19 | 0.23 | 0.73 | 1.00 | 0.89 | 0.94 | 1.75 | |||
| 0.84 | 0.63 | 0.53 | 0.66 | 1.25 | 1.37 | 1.01 |
AG: albumen gland; DS: dart-sac of auxiliary copulatory organ; E: epiphallus; EF: epiphallial flagellum; FO: free oviduct; HD: hermaphroditic duct; P: penis; SOD: spermoviduct; V: vagina.
Measurements (in cm) of and sp. n. Mean, standard error, statistical method and the p-value were provided.
| whorls | 7.21±0.04 | 7.23±0.05 | M |
| shell width (SW) | 1.97±0.02 | 2.46±0.04 | W, |
| shell height (SH) | 1.04±0.01 | 1.21±0.02 | M, |
| aperture width (AW) | 0.75±0.01 | 0.97±0.02 | W, |
| aperture height (AH) | 0.53±0.01 | 0.74±0.02 | W, |
| umbilicus width (UW) | 0.72±0.01 | 0.95±0.02 | M, |
| body whorl height (BH) | 0.57±0.01 | 0.68±0.01 | W, |
| secondary body whorl height (SBH) | 0.10±0.00 | 0.10±0.00 | M |
| Angle of apex (AA) | 150.8±0.65 | 154.7±0.67 | M, |
| First whorl width (FW) | 0.14±0.00 | 0.16±0.00 | M, |
| 2nd whorl width (2W) | 0.06±0.00 | 0.07±0.00 | M, |
| 3rd whorl width (3W) | 0.08±0.00 | 0.10±0.00 | M, |
| 4th whorl width (4W) | 0.12±0.00 | 0.14±0.00 | M, |
| 5th whorl width (5W) | 0.16±0.00 | 0.19±0.00 | M, |
| 6th whorl width (6W) | 0.20±0.00 | 0.25±0.00 | M, |
| SH/SW | 0.53±0.01 | 0.49±0.00 | W, |
| AW/SW | 0.38±0.00 | 0.39±0.00 | M, |
| UW/SW | 0.37±0.00 | 0.39±0.01 | M |
| AH/SH | 0.51±0.01 | 0.62±0.01 | W, |
| AH/AW | 0.70±0.01 | 0.76±0.01 | W, |
| SH/UW | 1.45±0.02 | 1.28±0.03 | M, |
| AW/UW | 1.05±0.01 | 1.03±0.02 | M |
| AH/UW | 0.73±0.01 | 0.79±0.02 | M, |
| BH/SW | 0.29±0.00 | 0.28±0.00 | M, |
| BH/SH | 0.55±0.00 | 0.57±0.01 | W, |
| BH/UW | 0.79±0.01 | 0.73±0.02 | M, |
| SBH/BH | 0.68±0.01 | 0.78±0.01 | W, |
| SBH/SW | 0.05±0.00 | 0.04±0.00 | W, |
| SBH/SH | 0.10±0.00 | 0.08±0.00 | W, |
| SBH/UW | 0.15±0.01 | 0.11±0.00 | W, |
| FW/SW | 0.07±0.00 | 0.06±0.00 | M, |
| 2W/3W | 0.75±0.03 | 0.68±0.01 | M |
| 3W/4W | 0.68±0.02 | 0.72±0.01 | M |
| 4W/5W | 0.76±0.01 | 0.70±0.01 | M, |
| 5W/6W | 0.79±0.01 | 0.77±0.01 | W |
M: Mann-Whitney U test; W: Welch’s t test.
Figure 5.Principle component analysis (PCA) of and sp. n. A PCA of measurements and ratios B relative warps PCA of shell shape coordinates.
Figure 6.Mean shell shape of A and B sp. n.
Figure 7.Shell images of sp. n. and . sp. n.: A holotype, NMNS-7276-001 B–E paratype, NHMUK20140070, the same locality of holotype. : F collected from Zhishanyan, Taipei City G collected from Linmei Shipan Trail, Jiaoxi Township, I-Lan County. Scale bar = 1 cm.
Figure 8.Living snail sp. n. from Heren, Xiulin Township, Hualien County, Taiwan (sampling site 19 in Table 1).