Literature DB >> 20500846

The integrative future of taxonomy.

José M Padial1, Aurélien Miralles, Ignacio De la Riva, Miguel Vences.   

Abstract

BACKGROUND: Taxonomy is the biological discipline that identifies, describes, classifies and names extant and extinct species and other taxa. Nowadays, species taxonomy is confronted with the challenge to fully incorporate new theory, methods and data from disciplines that study the origin, limits and evolution of species.
RESULTS: Integrative taxonomy has been proposed as a framework to bring together these conceptual and methodological developments. Here we review perspectives for an integrative taxonomy that directly bear on what species are, how they can be discovered, and how much diversity is on Earth.
CONCLUSIONS: We conclude that taxonomy needs to be pluralistic to improve species discovery and description, and to develop novel protocols to produce the much-needed inventory of life in a reasonable time. To cope with the large number of candidate species revealed by molecular studies of eukaryotes, we propose a classification scheme for those units that will facilitate the subsequent assembly of data sets for the formal description of new species under the Linnaean system, and will ultimately integrate the activities of taxonomists and molecular biologists.

Entities:  

Year:  2010        PMID: 20500846      PMCID: PMC2890416          DOI: 10.1186/1742-9994-7-16

Source DB:  PubMed          Journal:  Front Zool        ISSN: 1742-9994            Impact factor:   3.172


  64 in total

1.  Molecular correlates of reproductive isolation.

Authors:  Benjamin M Fitzpatrick
Journal:  Evolution       Date:  2002-01       Impact factor: 3.694

2.  Taxonomy as a fundamental discipline.

Authors:  Edward O Wilson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-04-29       Impact factor: 6.237

Review 3.  The unholy trinity: taxonomy, species delimitation and DNA barcoding.

Authors:  Rob DeSalle; Mary G Egan; Mark Siddall
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2005-10-29       Impact factor: 6.237

Review 4.  Taxonomy in a changing world: seeking solutions for a science in crisis.

Authors:  Ingi Agnarsson; Matjaz Kuntner
Journal:  Syst Biol       Date:  2007-06       Impact factor: 15.683

5.  Difference in plumage color used in species recognition between incipient species is linked to a single amino acid substitution in the melanocortin-1 receptor.

Authors:  J Albert C Uy; Robert G Moyle; Christopher E Filardi; Zachary A Cheviron
Journal:  Am Nat       Date:  2009-08       Impact factor: 3.926

6.  Speciation through sensory drive in cichlid fish.

Authors:  Ole Seehausen; Yohey Terai; Isabel S Magalhaes; Karen L Carleton; Hillary D J Mrosso; Ryutaro Miyagi; Inke van der Sluijs; Maria V Schneider; Martine E Maan; Hidenori Tachida; Hiroo Imai; Norihiro Okada
Journal:  Nature       Date:  2008-10-02       Impact factor: 49.962

Review 7.  Mitochondrial DNA under siege in avian phylogeography.

Authors:  Robert M Zink; George F Barrowclough
Journal:  Mol Ecol       Date:  2008-04-03       Impact factor: 6.185

Review 8.  Cryptic species as a window on diversity and conservation.

Authors:  David Bickford; David J Lohman; Navjot S Sodhi; Peter K L Ng; Rudolf Meier; Kevin Winker; Krista K Ingram; Indraneil Das
Journal:  Trends Ecol Evol       Date:  2006-11-28       Impact factor: 17.712

9.  Delimiting species in recent radiations.

Authors:  H Bradley Shaffer; Robert C Thomson
Journal:  Syst Biol       Date:  2007-12       Impact factor: 15.683

10.  Underestimation of species richness in neotropical frogs revealed by mtDNA analyses.

Authors:  Antoine Fouquet; André Gilles; Miguel Vences; Christian Marty; Michel Blanc; Neil J Gemmell
Journal:  PLoS One       Date:  2007-10-31       Impact factor: 3.240

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  211 in total

1.  First indications of a highland specialist among mouse lemurs (Microcebus spp.) and evidence for a new mouse lemur species from eastern Madagascar.

Authors:  Ute Radespiel; Jonah H Ratsimbazafy; Solofonirina Rasoloharijaona; Herimalala Raveloson; Nicole Andriaholinirina; Romule Rakotondravony; Rose M Randrianarison; Blanchard Randrianambinina
Journal:  Primates       Date:  2011-12-24       Impact factor: 2.163

2.  High levels of cryptic species diversity uncovered in Amazonian frogs.

Authors:  W Chris Funk; Marcel Caminer; Santiago R Ron
Journal:  Proc Biol Sci       Date:  2011-11-30       Impact factor: 5.349

3.  Craniodental and Postcranial Characters of Non-Avian Dinosauria Often Imply Different Trees.

Authors:  Yimeng Li; Marcello Ruta; Matthew A Wills
Journal:  Syst Biol       Date:  2020-07-01       Impact factor: 15.683

4.  Reproductive isolation between phylogeographic lineages scales with divergence.

Authors:  Sonal Singhal; Craig Moritz
Journal:  Proc Biol Sci       Date:  2013-10-09       Impact factor: 5.349

5.  Investigating species boundaries using DNA and morphology in the mite Tyrophagus curvipenis (Acari: Acaridae), an emerging invasive pest, with a molecular phylogeny of the genus Tyrophagus.

Authors:  Pamela Murillo; Pavel Klimov; Jan Hubert; Barry OConnor
Journal:  Exp Appl Acarol       Date:  2018-04-26       Impact factor: 2.132

6.  Genetic calibration of species diversity among North America's freshwater fishes.

Authors:  Julien April; Richard L Mayden; Robert H Hanner; Louis Bernatchez
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-13       Impact factor: 11.205

7.  Independent Transitions between Monsoonal and Arid Biomes Revealed by Systematic Revison of a Complex of Australian Geckos (Diplodactylus; Diplodactylidae).

Authors:  Paul M Oliver; Patrick J Couper; Mitzy Pepper
Journal:  PLoS One       Date:  2014-12-10       Impact factor: 3.240

8.  Monogeneans of the catfish Pimelodus blochii Valenciennes (Siluriformes: Pimelodidae) from the Brazilian Amazon, with a description of a new species of Ameloblastella Kritsky, Mendoza-Franco & Scholz, 2000 (Monogenea: Dactylogyridae).

Authors:  Luciano P Negreiros; Marcos Tavares-Dias; Felipe B Pereira
Journal:  Syst Parasitol       Date:  2019-05-13       Impact factor: 1.431

9.  Integrative taxonomy and analysis of species richness patterns of nocturnal Darwin wasps of the genus Enicospilus Stephens (Hymenoptera, Ichneumonidae, Ophioninae) in Japan.

Authors:  So Shimizu; Gavin R Broad; Kaoru Maeto
Journal:  Zookeys       Date:  2020-11-10       Impact factor: 1.546

Review 10.  Repositories for Taxonomic Data: Where We Are and What is Missing.

Authors:  Aurélien Miralles; Teddy Bruy; Katherine Wolcott; Mark D Scherz; Dominik Begerow; Bank Beszteri; Michael Bonkowski; Janine Felden; Birgit Gemeinholzer; Frank Glaw; Frank Oliver Glöckner; Oliver Hawlitschek; Ivaylo Kostadinov; Tim W Nattkemper; Christian Printzen; Jasmin Renz; Nataliya Rybalka; Marc Stadler; Tanja Weibulat; Thomas Wilke; Susanne S Renner; Miguel Vences
Journal:  Syst Biol       Date:  2020-11-01       Impact factor: 15.683

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