Literature DB >> 25344359

Prioritizing targets for precision cancer medicine.

F Andre1, E Mardis2, M Salm3, J-C Soria4, L L Siu5, C Swanton6.   

Abstract

The implementation of cancer genomic testing into the clinical setting has brought major opportunities. However, as our understanding of cancer initiation, maintenance and progression improves through detailed cancer genomic studies, the challenges associated with driver identification and target classification in the clinical setting become clearer. Here, we review recent insights into cancer genomic testing in the clinical setting, and suggest a target classification approach that considers the levels of evidence supporting the prioritization of tumour drivers for therapeutic targeting in light of complex cancer clonal and sub-clonal structures and clinical successes and failures in the field. We argue that such classification approaches, together with transparent reporting of both positive and negative clinical data and continued research to identify the sub-clonal dynamics of driver events during the disease course, will facilitate inter-trial comparisons, optimize patient informed consent and provide a critically balanced evaluation of genomic testing in clinical practice.
© The Author 2014. Published by Oxford University Press on behalf of the European Society for Medical Oncology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  biomarkers; breast cancer; genomic instability; lung cancer

Mesh:

Substances:

Year:  2014        PMID: 25344359     DOI: 10.1093/annonc/mdu478

Source DB:  PubMed          Journal:  Ann Oncol        ISSN: 0923-7534            Impact factor:   32.976


  59 in total

Review 1.  Exploiting Synthetic Lethality and Network Biology to Overcome EGFR Inhibitor Resistance in Lung Cancer.

Authors:  Simon Vyse; Annie Howitt; Paul H Huang
Journal:  J Mol Biol       Date:  2017-05-03       Impact factor: 5.469

2.  A framework to rank genomic alterations as targets for cancer precision medicine: the ESMO Scale for Clinical Actionability of molecular Targets (ESCAT).

Authors:  J Mateo; D Chakravarty; R Dienstmann; S Jezdic; A Gonzalez-Perez; N Lopez-Bigas; C K Y Ng; P L Bedard; G Tortora; J-Y Douillard; E M Van Allen; N Schultz; C Swanton; F André; L Pusztai
Journal:  Ann Oncol       Date:  2018-09-01       Impact factor: 32.976

Review 3.  Precision Oncology Decision Support: Current Approaches and Strategies for the Future.

Authors:  Katherine C Kurnit; Ecaterina E Ileana Dumbrava; Beate Litzenburger; Yekaterina B Khotskaya; Amber M Johnson; Timothy A Yap; Jordi Rodon; Jia Zeng; Md Abu Shufean; Ann M Bailey; Nora S Sánchez; Vijaykumar Holla; John Mendelsohn; Kenna Mills Shaw; Elmer V Bernstam; Gordon B Mills; Funda Meric-Bernstam
Journal:  Clin Cancer Res       Date:  2018-02-02       Impact factor: 12.531

4.  Mesenchymal marker and LGR5 expression levels in circulating tumor cells correlate with colorectal cancer prognosis.

Authors:  Wuyi Wang; Lin Wan; Shiyang Wu; Jianguo Yang; Yang Zhou; Fang Liu; Zhengzheng Wu; Yong Cheng
Journal:  Cell Oncol (Dordr)       Date:  2018-06-14       Impact factor: 6.730

5.  Plasmid-Based Materials as Multiplex Quality Controls and Calibrators for Clinical Next-Generation Sequencing Assays.

Authors:  David J Sims; Robin D Harrington; Eric C Polley; Thomas D Forbes; Michele G Mehaffey; Paul M McGregor; Corinne E Camalier; Kneshay N Harper; Courtney H Bouk; Biswajit Das; Barbara A Conley; James H Doroshow; P Mickey Williams; Chih-Jian Lih
Journal:  J Mol Diagn       Date:  2016-05       Impact factor: 5.568

6.  Clinical Implications of Aberrant PD-1 and CTLA4 Expression for Cancer Immunity and Prognosis: A Pan-Cancer Study.

Authors:  Jian-Nan Liu; Xiang-Shuo Kong; Tao Huang; Rui Wang; Wang Li; Qi-Feng Chen
Journal:  Front Immunol       Date:  2020-09-10       Impact factor: 7.561

Review 7.  Operationalization of Next-Generation Sequencing and Decision Support for Precision Oncology.

Authors:  Jia Zeng; Amber Johnson; Md Abu Shufean; Michael Kahle; Dong Yang; Scott E Woodman; Thuy Vu; Shhyam Moorthy; Vijaykumar Holla; Funda Meric-Bernstam
Journal:  JCO Clin Cancer Inform       Date:  2019-09

8.  Enhancing cancer clonality analysis with integrative genomics.

Authors:  Erich A Peterson; Michael A Bauer; Shweta S Chavan; Cody Ashby; Niels Weinhold; Christoph J Heuck; Gareth J Morgan; Donald J Johann
Journal:  BMC Bioinformatics       Date:  2015-09-25       Impact factor: 3.169

Review 9.  A decision support framework for genomically informed investigational cancer therapy.

Authors:  Funda Meric-Bernstam; Amber Johnson; Vijaykumar Holla; Ann Marie Bailey; Lauren Brusco; Ken Chen; Mark Routbort; Keyur P Patel; Jia Zeng; Scott Kopetz; Michael A Davies; Sarina A Piha-Paul; David S Hong; Agda Karina Eterovic; Apostolia M Tsimberidou; Russell Broaddus; Elmer V Bernstam; Kenna R Shaw; John Mendelsohn; Gordon B Mills
Journal:  J Natl Cancer Inst       Date:  2015-04-11       Impact factor: 13.506

Review 10.  Glioblastoma targeted therapy: updated approaches from recent biological insights.

Authors:  M Touat; A Idbaih; M Sanson; K L Ligon
Journal:  Ann Oncol       Date:  2017-07-01       Impact factor: 32.976

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