| Literature DB >> 25343260 |
Li-Lian Chao1, Li-Ling Liu1, Tsung-Yu Ho1, Chien-Ming Shih2.
Abstract
Borrelia garinii spirochete was detected for the first time in Ixodes ovatus tick ectoparasitized on stray cat in Taiwan. The genetic identity of this detected spirochete was determined by analyzing the gene sequence amplified by genospecies-specific polymerase chain reaction assays based on the 5S-23S intergenic spacer amplicon (rrf-rrl) and outer surface protein A (ospA) genes of B. burgdorferi sensu lato. Phylogenetic relationships were analyzed by comparing the sequences of rrf-rrl and ospA genes obtained from 27 strains of Borrelia spirochetes representing six genospecies of Borrelia. Seven major clades can be easily distinguished by neighbour-joining analysis and were congruent by maximum-parsimony method. Phylogenetic analysis based on rrf-rrl gene revealed that this detected spirochete (strain IO-TP-TW) was genetically affiliated to the same clade with a high homogeneous sequences (96.7 to 98.1% similarity) within the genospecies of B. garinii and can be discriminated from other genospecies of Borrelia spirochetes. Interspecies analysis based on the genetic distance values indicates a lower level (<0.022) of genetic divergence (GD) within the genospecies of B. garinii, and strain IO-TP-TW was genetically more distant ( >0.113) to the strains identified in I. ovatus collected from Japan and China. Intraspecies analysis also reveals a higher homogeneity (GD<0.005) between tick (strain IO-TP-TW) and human (strain Bg-PP-TW1) isolates of B. garinii in Taiwan. This study provides the first evidence of B. garinii isolated and identified in an I. ovatus tick in Asia, and the higher homogeneity of B. garinii between tick and human strain may imply the risk of human infection by I. ovatus bite.Entities:
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Year: 2014 PMID: 25343260 PMCID: PMC4208787 DOI: 10.1371/journal.pone.0110599
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Genospecies and strains of Borrelia spirochetes used for analysis in this study.
| Genospecies and strain | Origin of | Genbank accession number | ||
| Biological | Geographic |
|
| |
|
| ||||
| B31 |
| USA | L30127 | AY030279 |
| IP1 | Human CSF | France | AF090977 | |
| Twkm5 |
| Taiwan | AY032908 | AF369941 |
| KH-13 |
| Taiwan | JF970245 | |
| Bbss-MP-TW | Human skin | Taiwan | GQ499848 | |
|
| ||||
| 20047 |
| France | L30119 | |
| NT29 |
| Japan | L30130 | |
| CT7p |
| China | AB035963 | |
| Tr309 |
| Turkey | AB035963 | |
| Bg-PP-TW1 | Human skin | Taiwan | JX649205 | |
|
|
|
|
|
|
| SKT-7.1 |
| Slovakia | GU906888 | |
| Khab457 |
| Russia | AY260455 | |
| Tom 5202 |
| Russia | DQ479285 | |
| PBi | Human CSF | Germany | X80257 | |
| PTrob | Human skin | Slovenia | X80186 | |
|
| ||||
| VS116 |
| Switzerland | L30134 | Y10840 |
| CKA2a |
| China | AB022124 | |
| M49 |
| Netherland | AF095945 | |
|
| ||||
| VS461 |
| Switzerland | L30135 | Z29087 |
| Khab |
| Russia | AY502599 | |
| J1 |
| Japan | L30129 | |
| Ba-PP-TW1 | Human skin | Taiwan | JX649207 | |
| Ba-MP-TW | Human skin | Taiwan | GQ499849 | |
|
| ||||
| Cow611C |
| Japan | L30125 | Y10890 |
| HO14 |
| Japan | L30128 | Y10893 |
|
| ||||
| CWO1 |
| China | AB022130 | |
| NNIo |
| Nepel | AB100435 | |
GenBank accession numbers for rrf-rrl (KJ577538) and OspA (KM397123) were submitted by this study.
Figure 1Light micrographs of female (A, B, and C) and male (D, E, and F) Ixodes ovatus ectoparasitized on cat in Taiwan.
A, Dorsal view of female tick showing one pair of long palp (long arrow), oval porose areas (short arrows) situated at the subpentagonal basis capituli and the oval-shaped scutum covered on a half of abdomen (arrowhead); B, Ventral view of female tick showing a special transparent membrane-like structure (white sheet) covered on a third of coxae I (short arrows) and two third of coxae II (long arrows); C, The genital aperture (arrowhead) is situated at a level between coxae III and IV. Laterally, the rounded spiracular plates (short arrow) contain large maculae. The oval-shaped anal groove (long arrow) encircled around the anus with a posterior opening was situated at the end of abdomen; D, Dorsal view of male tick showing the oval-shaped scutum covered on full-abdomen (arrowhead); E, Ventrally, coxae IV of male tick possess short, distinct external spurs (arrowhead), and coxae I–III was characterized with a special transparent membrane-like structure (white sheet) covered on a third of coxae I (short arrow), two third of coxae II and a half of coxae III (long arrows); F, The genital aperture (arrowhead) is situated at level between coxae III. Laterally, the oval-shaped spiracular plates (short arrow) contain small maculae. The adenal plates (long arrows) paralleled with the anus were only observed on male tick.
Figure 2Light micrograph of pure isolate of Borrelia spirochete observed in culture medium at 3 to 7 days after filtrated passage.
Figure 3Phylogenetic relationships based on the 5S (rrf) –23S (rrl) rRNA gene sequences between Borrelia spirochete isolated from I. ovatus tick (strain IO-TP-TW) in Taiwan and 14 other strains belonging to six genospecies of Borrelia spirochetes.
The trees were constructed and analyzed by (A) neighbour-joining and (B) maximum parsimony methods using 1000 bootstraps replicates. Numbers at the nodes indicate the percentages of reliability of each branch of the tree. Branch lengths are drawn proportional to the estimated sequence divergence.
Figure 4Phylogenetic relationships based on the outer surface protein A (OspA) gene sequences between Borrelia spirochete isolated from I. ovatus tick (strain IO-TP-TW) in Taiwan and 13 other strains belonging to six genospecies of Borrelia spirochetes.
The trees were constructed and analyzed by (A) neighbour-joining and (B) maximum parsimony methods using 1000 bootstraps replicates. Numbers at the nodes indicate the percentages of reliability of each branch of the tree. Branch lengths are drawn proportional to the estimated sequence divergence.
Sequence similarity among 5S (rrf) –23S (rrl) gene sequences of Borrelia strains detected in Ixodes ovatus tick from cat, other sources in Taiwan, and strains of other genospecies of Borrelia.
| Genospecies and strain | B31 |
| Twkm5 | KH13 | 20047 | IO-TP-TW |
| NT29 | CT7p | VS461 |
|
| VS116 | HO14 | CWO1 |
|
| - | 99.5 | 99.5 | 97.6 | 92.4 | 90.5 | 91.9 | 91.9 | 91.9 | 85.7 | 85.7 | 85.2 | 89.0 | 80.0 | 81.0 |
|
| - | 100 | 98.1 | 92.9 | 91.0 | 92.4 | 92.4 | 92.4 | 86.2 | 86.2 | 85.7 | 89.5 | 80.5 | 81.4 | |
| Twkm5 | - | 98.1 | 92.9 | 91.0 | 92.4 | 92.4 | 92.4 | 86.2 | 86.2 | 85.7 | 89.5 | 80.5 | 81.4 | ||
| KH13 | - | 91.0 | 91.9 | 90.5 | 90.5 | 90.5 | 84.3 | 84.3 | 83.8 | 87.6 | 79.5 | 80.5 | |||
|
| - | 98.1 | 99.5 | 99.6 | 98.6 | 89.0 | 89.0 | 88.6 | 92.4 | 82.4 | 81.9 | ||||
| IO-TP-TW | - | 97.6 | 96.7 | 96.7 | 87.1 | 87.1 | 86.7 | 90.5 | 80.5 | 80.0 | |||||
|
| - | 98.1 | 98.1 | 88.6 | 88.6 | 89.0 | 91.9 | 82.4 | 81.4 | ||||||
| NT29 | - | 100 | 87.6 | 87.6 | 87.1 | 91.9 | 81.9 | 82.4 | |||||||
| CT7p | - | 87.6 | 87.6 | 87.1 | 91.9 | 81.9 | 82.4 | ||||||||
|
| - | 100 | 99.5 | 86.7 | 89.5 | 82.9 | |||||||||
|
| - | 99.5 | 86.7 | 89.5 | 82.9 | ||||||||||
|
| - | 86.2 | 89.5 | 82.4 | |||||||||||
|
| - | 81.9 | 81.0 | ||||||||||||
|
| - | 87.6 | |||||||||||||
|
| - |
Strains: B31, Bbss-MP-TW, Twkm5 and KH13, B. burgdorferi sensu stricto (Bbss); 20047, IO-TP-TW, Bg-PP-TW1, NT29 and CT7p, B. garinii (Bg); VS461, Ba-MP-TW and Ba-PP-TW1, B. afzelii (Ba); VS116, B. valaisiana (Bv); HO14, B. japonica (Bj); CWO1, B. sinica (Bs).
Inter- and Intra-species analysis of genetic distance valuesa based on the 5S (rrf) –23S (rrl) gene sequences among Borrelia strains detected in Ixodes ovatus tick from cat, other sources in Taiwan, and strains of other genospecies of Borrelia.
| Genospecies and strain | B31 |
| Twkm5 | KH13 | 20047 | IO-TP-TW |
| NT29 | CT7p | VS461 |
|
| VS116 | HO14 | CWO1 |
|
| - | ||||||||||||||
|
| 0.005 | - | |||||||||||||
| Twkm5 | 0.005 | 0.000 | - | ||||||||||||
| KH13 | 0.011 | 0.005 | 0.005 | - | |||||||||||
|
| 0.071 | 0.065 | 0.065 | 0.071 | - | ||||||||||
| IO-TP-TW | 0.078 | 0.071 | 0.071 | 0.078 | 0.005 | - | |||||||||
|
| 0.071 | 0.065 | 0.065 | 0.071 | 0.000 | 0.005 | - | ||||||||
| NT29 | 0.078 | 0.071 | 0.071 | 0.078 | 0.016 | 0.022 | 0.016 | - | |||||||
| CT7p | 0.078 | 0.071 | 0.071 | 0.078 | 0.016 | 0.022 | 0.016 | 0.000 | - | ||||||
|
| 0.107 | 0.100 | 0.100 | 0.107 | 0.067 | 0.073 | 0.067 | 0.086 | 0.086 | - | |||||
|
| 0.107 | 0.100 | 0.100 | 0.107 | 0.067 | 0.073 | 0.067 | 0.086 | 0.086 | 0.000 | - | ||||
|
| 0.107 | 0.100 | 0.100 | 0.107 | 0.067 | 0.073 | 0.067 | 0.086 | 0.086 | 0.000 | 0.000 | - | |||
|
| 0.105 | 0.098 | 0.098 | 0.105 | 0.072 | 0.078 | 0.072 | 0.078 | 0.078 | 0.108 | 0.108 | 0.018 | - | ||
|
| 0.150 | 0.142 | 0.142 | 0.135 | 0.106 | 0.113 | 0.106 | 0.113 | 0.113 | 0.065 | 0.065 | 0.065 | 0.114 | - | |
|
| 0.171 | 0.163 | 0.163 | 0.154 | 0.143 | 0.151 | 0.143 | 0.135 | 0.135 | 0.205 | 0.205 | 0.205 | 0.152 | 0.051 | - |
The pairwise distance calculation was performed by the method of Kimura 2-parameter, as implemented in MEGA 4 (Tamura et al., 2007).
Strains: B31, Bbss-MP-TW, Twkm5 and KH13, B. burgdorferi sensu stricto (Bbss); 20047, IO-TP-TW, Bg-PP-TW1, NT29 and CT7p, B. garinii (Bg); VS461,
Ba-MP-TW and Ba-PP-TW1, B. afzelii (Ba); VS116, B. valaisiana (Bv); HO14, B. japonica (Bj); CWO1, B. sinica (Bs).
Figure 5Phylogenetic relationships based on the 5S (rrf) –23S (rrl) rRNA gene sequences of Borrelia spirochetes isolated from I. ovatus tick (strain IO-TP-TW) and other biological sources (i.e., human, tick and rodent) in Taiwan.
The trees were constructed and analyzed by (A) neighbour-joining and (B) maximum parsimony methods using 1000 bootstraps replicates. Numbers at the nodes indicate the percentages of reliability of each branch of the tree. Branch lengths are drawn proportional to the estimated sequence divergence.