Literature DB >> 25339390

Combination of an unbiased amplification method and a resequencing microarray for detecting and genotyping equine arteritis virus.

Aymeric Hans1, Delphine Gaudaire2, Jean-Claude Manuguerra3, Albertine Leon4, Antoine Gessain5, Claire Laugier2, Nicolas Berthet5, Stephan Zientara6.   

Abstract

This study shows that an unbiased amplification method applied to equine arteritis virus RNA significantly improves the sensitivity of the real-time reverse transcription-quantitative PCR (RT-qPCR) recommended by the World Organization for Animal Health. Twelve viral RNAs amplified using this method were hybridized on a high-density resequencing microarray for effective viral characterization.
Copyright © 2015, American Society for Microbiology. All Rights Reserved.

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Year:  2014        PMID： 25339390      PMCID： PMC4290937          DOI： 10.1128/JCM.01935-14

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  13 in total

1.  High-throughput variation detection and genotyping using microarrays.

Authors:  D J Cutler; M E Zwick; M M Carrasquillo; C T Yohn; K P Tobin; C Kashuk; D J Mathews; N A Shah; E E Eichler; J A Warrington; A Chakravarti
Journal:  Genome Res       Date:  2001-11       Impact factor: 9.043

2.  Description of the first recorded major occurrence of equine viral arteritis in France.

Authors:  S Pronost; P H Pitel; F Miszczak; L Legrand; C Marcillaud-Pitel; M Hamon; J Tapprest; U B R Balasuriya; F Freymuth; G Fortier
Journal:  Equine Vet J       Date:  2010-09-14       Impact factor: 2.888

3.  SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building.

Authors:  Manolo Gouy; Stéphane Guindon; Olivier Gascuel
Journal:  Mol Biol Evol       Date:  2009-10-23       Impact factor: 16.240

4.  Nidovirales: a new order comprising Coronaviridae and Arteriviridae.

Authors:  D Cavanagh
Journal:  Arch Virol       Date:  1997       Impact factor: 2.574

5.  Demonstration of the carrier state in naturally acquired equine arteritis virus infection in the stallion.

Authors:  P J Timoney; W H McCollum; A W Roberts; T W Murphy
Journal:  Res Vet Sci       Date:  1986-09       Impact factor: 2.534

6.  Detection of equine arteritis virus by real-time TaqMan reverse transcription-PCR assay.

Authors:  Udeni B R Balasuriya; Christian M Leutenegger; J B Topol; William H McCollum; Peter J Timoney; N James MacLachlan
Journal:  J Virol Methods       Date:  2002-03       Impact factor: 2.014

7.  De novo initiation of RNA synthesis by the arterivirus RNA-dependent RNA polymerase.

Authors:  Nancy Beerens; Barbara Selisko; Stefano Ricagno; Isabelle Imbert; Linda van der Zanden; Eric J Snijder; Bruno Canard
Journal:  J Virol       Date:  2007-05-30       Impact factor: 5.103

Review 8.  Arterivirus molecular biology and pathogenesis.

Authors:  Eric J Snijder; Marjolein Kikkert; Ying Fang
Journal:  J Gen Virol       Date:  2013-08-12       Impact factor: 3.891

9.  Phi29 polymerase based random amplification of viral RNA as an alternative to random RT-PCR.

Authors:  Nicolas Berthet; Anita K Reinhardt; India Leclercq; Sven van Ooyen; Christophe Batéjat; Philip Dickinson; Rayna Stamboliyska; Iain G Old; Katherine A Kong; Laurent Dacheux; Hervé Bourhy; Giulia C Kennedy; Christian Korfhage; Stewart T Cole; Jean-Claude Manuguerra
Journal:  BMC Mol Biol       Date:  2008-09-04       Impact factor: 2.946

Review 10.  Equine viral arteritis.

Authors:  P J Timoney; W H McCollum
Journal:  Vet Clin North Am Equine Pract       Date:  1993-08       Impact factor: 1.792
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  1 in total

1.  Serological evidence of equine arteritis virus infection and phylogenetic analysis of viral isolates in semen of stallions from Serbia.

Authors:  Sava Lazić; Diana Lupulović; Delphine Gaudaire; Tamas Petrovic; Gospava Lazić; Aymeric Hans
Journal:  BMC Vet Res       Date:  2017-11-07       Impact factor: 2.741
  1 in total

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