| Literature DB >> 25337466 |
Mohammad Ali Ghaffari1, Saeed Askari Sede2, Nadereh Rashtchizadeh3, Ghorban Mohammadzadeh4, Shahla Majidi5.
Abstract
INTRODUCTION: We evaluated the association between four polymorphisms in the CRP gene with serum C-reactive protein (CRP) levels, prevalence and severity of coronary artery disease (CAD) in type 2 diabetes mellitus (T2DM) patients.Entities:
Keywords: C-reactive protein; Coronary artery disease; Gensini score; Polymorphism; Type2 diabetes mellitus
Year: 2014 PMID: 25337466 PMCID: PMC4204038 DOI: 10.15171/bi.2014.006
Source DB: PubMed Journal: Bioimpacts ISSN: 2228-5652
PCR primer, products and restriction enzymes for the genotyping of CRP polymorphisms
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| rs3093059 |
F-TCAATTGGCTGAGAAAATGTGTC | 568 | Mun1 | 568-470-98 |
| rs2794521 | F-TCAATTGGCTGAGAAAATGTGTC | 568 | DraIII | 568-510-58 |
| rs3091244 | FAGCGCCCAACTGAAATGTT | 502 | Taq1,Bfa1 | 502-475-27 |
| rs3093062 | F-AGCGCCCAACTGAAATGTT | 502 | PamII | 502-456-46 |
Patient characteristics
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| Age, years | 53.6±5.3 | 49.6±6.3 | <0.001 |
| Men | 77 (51) | 57 (36.3) | 0.011 |
| Duration of Diabetes, years | 7.8±7.2 | 6.5±5.7 | 0.08 |
| Duration of CAD, years | 2±3.2 | - | |
| Hypertension | 79 (52.3) | 56 (35.7) | <0.001 |
| Dyslipidemia | 84 (55.6) | 82 (52.2) | 0.018 |
| Body mass index, Kg/m2 | 26.0±3.4 | 25.9±2.6 | 0.74 |
| Systolic blood pressure, mmHg | 133.2±25.1 | 124.7±17.8 | 0.002 |
| Diastolic blood pressure, mmHg | 82.6±13.9 | 77±10.7 | <0.001 |
| Current use | |||
| Lipid lowering drug | 71 (47) | 56 (35.7) | <0.001 |
| Acetyl Salisilic Acid | 86 (57) | 42 (26.8) | <0.001 |
| ACE inhibitors | 39 (25.8) | 21 (13.4) | <0.001 |
| FPG, mg/dl | 151±53 | 147±51 | 0.18 |
| Ln Cholestrol,mg/dl** | 5.23±0.29 | 5.24±0.23 | 0.63 |
| Ln TG, mg/dl** | 5±0.55 | 5.22±0.54 | <0.001 |
| HDL-c , mg/dl | 40.3±10.2 | 46.8±11 | <0.001 |
| LDL-c, mg/dl | 122.9±52. | 106.1±36 | <0.001 |
| Ln CRP, mg/l** | 1. 46±0.55 | 1.06±0.63 | <0.001 |
Values presented are means±SD or numbers (%). Numbers may not add up to the expected total due to missing data for some variables.
CRP=C-reactive protein; T2DM=type2 diabete melitus; CAD=coronary artery disease; ACE=angiotensin-converting enzyme; FPG=fasting plasma glucose; TG=triglyceride; HDL-c=high density lipoprotein cholestrol; LDL-c=low density lipoprotein cholestrol. FPG=fasting plasma glucose
*Chi –Square or unpaired-sample t-test
**Ln-Transformed variables
Genotypic and allelic frequencies of SNPs in the CRP gene by study groups
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| rs3093059 | ||||
| TT | 89(58.9) | 101 (64.3) | 0.79 (0.5-1.26) | 0.33 |
| TC | 56 (37.1 ) | 48 (30.5) | 1.34 (0.83-2.15) | 0.23 |
| CC | 6 (4 ) | 8 (5) | 0.77 (0.26-2.27) | 0.63 |
| T | 234 (77.5) | 250 (79.6) | 0.88 (0.6-1.3) | 0.52 |
| C | 68 (22.5) | 64 (20.4) | 1.14 (0.77-1.66) | 0.51 |
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HWE: | 0.6 (0.44) | 0.53 (0.47) | ||
| rs3091244 | ||||
| CC | 46 (30.5 ) | 53 (33.8) | 0.88 (0.55-1.42) | 0.61 |
| CT | 42 (27.8) | 38 (24.2) | 1.2 (0.72-2.01) | 0.47 |
| CA | 32 (21.2) | 40 (25.5) | 0.78 (0.46-1.33) | 0.37 |
| TT | 20 (13.2) | 13 (8.2) | 1.69 (0.81-3.53) | 0.16 |
| TA | 9 (6) | 10 (6.3) | 0.93 (0.36-2.36) | 0.88 |
| AA | 2 (1.3) | 3 (2) | 0.69 (0.11-4.18) | 0.68 |
| C | 166 (55) | 184 (58.7) | 0.86 (0.62-1.18) | 0.36 |
| T | 91 (30.1) | 74 (23.5) | 1.4 (0.97-2.01) | 0.06 |
| A | 45 (14.9) | 56 (17.8) | 0.8 (0.52-1.23) | 0.32 |
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HWE: | 9.2 (0.03) | 6 (0.11) | ||
| rs2794521 | ||||
| AA | 66 (43.7) | 66 (42) | 1.07 (0.68-1.68) | 0.77 |
| AG | 62 (41.1) | 80 (51) | 0.67 (0.43-1.05) | 0.08 |
| GG | 23 (15.2) | 11 (7) | 2.38 (1.12-5.08) | 0.02 |
| A | 194 (64.2) | 212 (67.5) | 0.86 (0.62-1.2) | 0.39 |
| G | 108 (35.8) | 102 (32.5) | 1.16 (0.83-1.61) | 0.39 |
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HWE: | 1.7 (0.19) | 4.1 (0.04) | ||
| rs3093062 | ||||
| GG | 139 (92) | 151 (96.1) | 0.46 (0.17-1.26) | 0.13 |
| GA | 12 (8) | 6 (3.9) | 2.17 (0.79-5.94) | 0.13 |
| G | 290 (96) | 308 (98) | 0.47 (0.17-1.27) | 0.14 |
| A | 12 (4) | 6 (2) | 2.12 (0.79-5.73) | 0.14 |
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HWE: | 0.25 (0.6) | 0.05 (0.8) |
HWE= Hardy-Weinberg equilibrium; OR= odds ratio
a: χ2 test
b: Fisher’s exact test
Effect of CRP SNPs on the concentrations of CRP or Gensini Scores
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| rs3093059 | ||||||||
| TT | 189 | 1.25 (0.63) | ref | ref | 89 | 43.1 (33.7) | ref | ref |
| TC | 105 | 1.27 (0.6) | 0.02 | 0.8 | 56 | 40 (39.5) | 3.1 | 0.63 |
| CC | 14 | 1.27 (0.57) | 0.02 | 0.84 | 6 | 38.8 (32.9) | 4.3 | 0.76 |
| T | 294 | 1.26 (0.62) | ref | ref | 145 | 40.9 (35.4) | ref | ref |
| C | 119 | 1.27 (0.6) | 0.01 | 0.51 | 62 | 38 (38) | 2.1 | 0.63 |
| rs3091244 | ||||||||
| CC | 99 | 1.06 (0.61) | ref | ref | 46 | 44.4 (40) | ref | ref |
| CT | 80 | 1.21 (0.6) | 0.14 | 0.12 | 42 | 39.1 (35.1) | 5.2 | 0.51 |
| CA | 72 | 1.46 (0.61) | 0.4 | <0.001 | 32 | 50.2 (35.2) | 5.8 | 0.51 |
| TT | 33 | 1.39 (0.61) | 0.32 | 0.01 | 20 | 29.7 (23.6) | 14.8 | 0.12 |
| TA | 19 | 1.44 (0.51) | 0.38 | 0.01 | 9 | 27.3 (30) | 17 | 0.23 |
| AA | 5 | 1.47 (0.54) | 0.41 | 0.15 | 2 | 14 (5.6) | 30.4 | 0.29 |
| C | 251 | 1.22 (0.63) | ref | ref | 120 | 44.1 (36.8) | ref | ref |
| T | 132 | 1.29 (0.6) | 0.07 | 0.34 | 71 | 34.9 (31.7) | 9.2 | 0.08 |
| A | 96 | 1.47 (0.59) | 0.25 | <0.05 | 43 | 43.7 (34.8) | 0.4 | 0.95 |
| rs2794521 | ||||||||
| AA | 132 | 1.26 (0.64) | ref | ref | 66 | 43.6 (37.4) | ref | ref |
| AG | 142 | 1.21 (0.61) | 0.04 | 0.57 | 62 | 41.4 (34.2) | 2.2 | 0.73 |
| GG | 34 | 1.42 (0.54) | 0.16 | 0.19 | 23 | 37.9 (35.6) | 5.7 | 0.53 |
| A | 274 | 1.24 (0.63) | ref | ref | 128 | 41.3 | ref | ref |
| G | 176 | 1.26 (0.55) | 0.02 | 0.76 | 85 | 39.7 | 1.6 | 0.74 |
| rs3093062 | ||||||||
| GG | 290 | 1.24 (0.63) | ref | ref | 139 | 42.7 (36.1) | ref | ref |
| GA | 18 | 1.56 (0.3) | 0.32 | 0.03 | 12 | 30.8 (29) | 11.9 | 0.29 |
| G | 308 | 1.26 (0.62) | ref | ref | 151 | 40.7 (35.2) | ref | ref |
| A | 18 | 1.56 (0.3) | 0.3 | 0.04 | 12 | 29.6 (28) | 11.2 | 0.28 |
a: Difference from reference value
Haplotype association with CAD (n=251)*
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| 1 | C | G | T | G | 0.2988 | 1.00 | - |
| 2 | C | A | T | G | 0.166 | 0.50 (0.19-1.32) | 0.16 |
| 3 | T | G | T | G | 0.141 | 1.05 (0.47-2.35) | 0.91 |
| 4 | C | G | C | G | 0.0844 | 1.30 (0.37-4.58) | 0.68 |
| 5 | T | A | T | G | 0.0615 | 0.72 (0.22-2.39) | 0.6 |
| 6 | A | G | T | G | 0.0509 | 0.09 (0.01-1.21) | 0.07 |
| 7 | A | G | C | G | 0.0469 | 0.11 (0.02-0.66) | 0.017 |
*Adjusted by age, sex, SBP and DBP, SBP=systolic blood pressure, DBP=diastolic blood pressure