| Literature DB >> 25333853 |
Xin Liu1, Olaf Kunert, Martina Blunder, Nanang Fakhrudin, Stefan M Noha, Clemens Malainer, Andreas Schinkovitz, Elke H Heiss, Atanas G Atanasov, Manfred Kollroser, Daniela Schuster, Verena M Dirsch, Rudolf Bauer.
Abstract
In the search for peroxisome proliferator-activated receptor gamma (PPARγ) active constituents from the roots and rhizomes of Notopterygium incisum, 11 new polyacetylene derivatives (1-11) were isolated. Their structures were elucidated by NMR and HRESIMS as new polyyne hybrid molecules of falcarindiol with sesquiterpenoid or phenylpropanoid moieties, named notoethers A-H (1-8) and notoincisols A-C (9-11), respectively. Notoincisol B (10) and notoincisol C (11) represent two new carbon skeletons. When tested for PPARγ activation in a luciferase reporter assay with HEK-293 cells, notoethers A-C (1-3), notoincisol A (9), and notoincisol B (10) showed promising agonistic activity (EC50 values of 1.7 to 2.3 μM). In addition, notoincisol A (9) exhibited inhibitory activity on NO production of stimulated RAW 264.7 macrophages.Entities:
Mesh:
Substances:
Year: 2014 PMID: 25333853 PMCID: PMC4251066 DOI: 10.1021/np500605v
Source DB: PubMed Journal: J Nat Prod ISSN: 0163-3864 Impact factor: 4.050
Figure 2Possible biogenetic pathway for notoincisols A (9) and C (11).
PPARγ Agonistic Effects Determined in a PPARγ-Driven Luciferase Reporter Assay
| compound | EC50 (μM) | maximal fold activation |
|---|---|---|
| 1.9 | 1.6 | |
| 1.7 | 2.0 | |
| 2.0 | 1.6 | |
| 2.3 | 2.8 | |
| 1.7 | 2.3 |
Figure 3PPARγ agonistic effects of polyacetylene adducts from N. incisum. (***p ≤ 0.001, n.s.: not significant; n = 3, ANOVA).
Figure 4Overall topology of the PPARγ ligand binding site. Amino acids from the entrance region are marked in green, from arm I in blue, and from arm II in pink.
Figure 5Representative docking poses of compounds 2 (A) and 10 (B) fitted into the PPARγ ligand binding site. Both compounds occupied parts of the entrance region (green) and extend into one of the hydrophobic arms (blue and pink) with their long alkyl chains. One of the smaller hydrophobic parts reached into the other hydrophobic arm. The hydrogen bond with Ser289, which was only observed with the active compounds 1, 2, 3, 9, and 10, is depicted as a green arrow. Ser289 is highlighted in black. Hydrophobic contacts with the binding site are shown as yellow spheres; those with the hydrogen bonds, as arrows.
13C NMR Spectroscopic Data (150 MHz, CDCl3) for Compounds 1–11a
| δC | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| C | |||||||||||
| 1 | 116.1 | 117.3 | 116.2 | 117.4 | 117.3 | 117.3 | 116.3 | 117.4 | 117.5 | 116.3 | 117.0 |
| 2 | 136.3 | 136.2 | 136.2 | 136.1 | 135.2 | 136.1 | 136.3 | 136.1 | 135.9 | 136.2 | 137.0 |
| 3 | 61.0 | 63.7 | 61.5 | 63.7 | 61.9 | 63.6 | 62.1 | 63.7 | 63.7 | 85.0 | 64.1 |
| 4 | 80.0 | 77.5 | 79.9 | 77.7 | 78.0 | 78.5 | 79.4 | 77.7 | 78.5 | 141.2 | 97.2 |
| 5 | 69.3 | 71.0 | 69.4 | 71.0 | 70.9 | 70.5 | 69.8 | 70.9 | 70.5 | 112.2 | 81.9 |
| 6 | 69.6 | 67.8 | 69.7 | 68.0 | 68.9 | 69.0 | 69.3 | 68.3 | 69.4 | 80.5 | 111.8 |
| 7 | 79.9 | 81.7 | 79.3 | 81.4 | 80.1 | 79.4 | 79.2 | 81.3 | 77.0 | 99.0 | 142.2 |
| 8 | 58.6 | 57.2 | 58.8 | 57.7 | 58.6 | 57.3 | 58.8 | 58.1 | 60.2 | 59.1 | 79.5 |
| 9 | 128.1 | 128.6 | 127.9 | 128.5 | 127.9 | 126.8 | 128.0 | 128.2 | 124.1 | 129.1 | 127.8 |
| 10 | 134.4 | 131.4 | 134.7 | 131.8 | 134.5 | 133.5 | 134.8 | 131.7 | 136.7 | 134.0 | 135.0 |
| 11 | 27.8 | 28.1 | 27.8 | 28.2 | 27.8 | 28.1 | 27.8 | 28.1 | 28.1 | 27.9 | 28.1 |
| 12 | 29.5 | 29.5 | 29.5 | 29.4 | 29.4 | 29.2 | 29.4 | 29.4 | 29.3 | 29.6 | 30.0 |
| 13 | 29.3 | 29.4 | 29.3 | 29.4 | 29.3 | 29.4 | 29.3 | 29.5 | 29.3 | 29.4 | 29.6 |
| 14 | 29.3 | 29.3 | 29.3 | 29.3 | 29.3 | 29.3 | 29.3 | 29.3 | 29.3 | 29.3 | 29.4 |
| 15 | 31.9 | 32.0 | 31.9 | 32.0 | 31.9 | 31.9 | 31.9 | 32.0 | 32.0 | 31.9 | 32.0 |
| 16 | 22.8 | 22.8 | 22.8 | 22.8 | 22.8 | 22.8 | 22.8 | 22.8 | 22.8 | 22.8 | 22.8 |
| 17 | 14.3 | 14.3 | 14.3 | 14.3 | 14.2 | 14.2 | 14.3 | 14.3 | 14.3 | 14.2 | 14.3 |
| 1′ | 40.8 | 40.9 | 80.4 | 80.5 | 79.4 | 79.4 | 43.5 | 43.2 | 127.0 | 128.9 | 128.8 |
| 2′ | 22.5 | 22.4 | 28.4 | 28.4 | 27.6 | 27.8 | 24.0 | 23.7 | 109.5 | 106.2 | 106.2 |
| 3′ | 37.4 | 38.5 | 38.2 | 38.2 | 36.1 | 37.3 | 41.4 | 41.3 | 146.9 | 147.8 | 147.7 |
| 4′ | 80.0 | 79.5 | 79.3 | 79.2 | 82.3 | 82.2 | 81.3 | 81.3 | 148.3 | 146.6 | 146.6 |
| 5′ | 50.9 | 51.2 | 54.1 | 53.5 | 50.3 | 50.7 | 55.0 | 54.8 | 114.9 | 108.2 | 108.1 |
| 6′ | 22.0 | 21.8 | 67.1 | 67.0 | 71.8 | 71.8 | 71.5 | 71.5 | 123.5 | 129.9 | 130.0 |
| 7′ | 49.3 | 49.8 | 50.1 | 50.5 | 46.2 | 46.4 | 52.0 | 52.1 | 146.1 | 119.0 | 119.1 |
| 8′ | 19.9 | 20.0 | 20.5 | 20.5 | 22.3 | 22.4 | 20.5 | 20.5 | 114.7 | 135.5 | 136.2 |
| 9′ | 44.9 | 45.2 | 41.6 | 41.8 | 36.8 | 36.8 | 42.8 | 43.0 | 165.8 | 72.3 | 72.0 |
| 10′ | 34.8 | 34.8 | 39.4 | 39.4 | 40.9 | 41.0 | 82.9 | 82.5 | |||
| 11′ | 73.5 | 73.1 | 29.1 | 29.0 | 25.9 | 25.8 | 29.7 | 29.7 | |||
| 12′ | 27.4 | 27.6 | 20.7 | 20.9 | 22.5 | 22.5 | 21.7 | 21.7 | |||
| 13′ | 27.0 | 27.1 | 21.2 | 21.2 | 24.1 | 24.1 | 21.4 | 21.3 | |||
| 14′ | 19.2 | 19.3 | 15.1 | 15.1 | 14.9 | 15.0 | 19.3 | 20.0 | |||
| 15′ | 20.6 | 20.7 | 21.4 | 22.8 | 19.7 | 18.5 | 23.3 | 23.3 | |||
| 3′-OMe | 56.1 | 56.1 | 56.1 | ||||||||
13C NMR of 11 was taken at 175 MHz, CDCl3.
Signals are interchangeable.
1H NMR Spectroscopic Data (600 MHz, CDCl3) for Compounds 1–4a
| δH ( | ||||
|---|---|---|---|---|
| H | ||||
| 1 | 5.41 d (17.5) | 5.46 d (18.5) | 5.42 d (17.0) | 5.47 |
| 5.16 | 5.24 d (10.7) | 5.18 d (10.2) | 5.25 d (10.6) | |
| 2 | 5.79 ddd (16.9, 10.2, 4.7) | 5.94 ddd (17.1, 10.1, 5.4) | 5.83 ddd (17.1, 10.3, 4.8) | 5.94 ddd (16.5, 10.2, 5.5) |
| 3 | 4.84 br d (4.1) | 4.93 br s | 4.85 br t (4.6) | 4.93 br t (4.7) |
| 8 | 5.16 | 5.01 d (6.7) | 5.20 | 5.03 br d (6.7) |
| 9 | 5.50 dd (10.7, 8.4) | 5.45 | 5.51 m | 5.45 m |
| 10 | 5.58 dt (10.5, 7.5) | 5.44 | 5.60 m | 5.45 m |
| 11 | 2.10 q (7.3) | 2.08 m | 2.10 q (7.3) | 2.07 m |
| 12 | 1.38 m | 1.39 m | 1.38 p (6.8) | 1.39 m |
| 13 | 1.28 | 1.30 | 1.28 | 1.29 |
| 14 | 1.28 | 1.30 | 1.28 | 1.29 |
| 15 | 1.27 | 1.27 | 1.27 | 1.27 |
| 16 | 1.29 | 1.29 | 1.29 | 1.30 |
| 17 | 0.88 | 0.89 | 0.88 t (6.8) | 0.89 |
| 1′ | 1.38 m | 1.38 d (13.4) | 3.23 br d (10.4) | 3.19 br d 9.6) |
| 1.06 m | 1.04 dt (3.5, 12.7) | |||
| 2′ | 1.60 m | 1.59 m | 1.72 m | 1.72 m |
| 1.30 m | 1.30 m | 1.59 m | 1.59 m | |
| 3′ | 1.66 m | 1.83 d (10.9) | 1.84 dt (12.8, 3.4) | 1.82 m |
| 1.63 m | 1.48 m | 1.74 m | 1.55 m | |
| 4′ | ||||
| 5′ | 1.45 d (12.3) | 1.26 d (12.3) | 1.29 s | 1.14 s |
| 6′ | 2.03 d (12.5) | 1.87 d (11.8) | 4.63 s | 4.54 s |
| 1.01 q (12.3) | 0.96 q (12.0) | |||
| 7′ | 1.46 m | 1.28 m | 0.91 m | 0.81 br t (10.5) |
| 8′ | 1.60 m | 1.58 m | 1.63 m | 1.61 m |
| 1.54 m | 1.51 m | 1.44 m | 1.46 m | |
| 9′ | 1.45 d (13.0) | 1.44 d (12.3) | 1.90 dt (12.7,3.3) | 1.89 br d (13.6 |
| 1.21 m | 1.15 m | 1.10 td (12.2,3.4) | 1.06 br t (13.1) | |
| 10′ | ||||
| 11′ | 1.51 m | 1.53 m | ||
| 12′ | 1.21 s | 1.19 s | 0.95 d (6.7) | 0.95 d (6.8) |
| 13′ | 1.22 s | 1.19 s | 0.96 d (6.8) | 0.93 d (6.8) |
| 14′ | 0.89 s | 0.88 s | 1.20 s | 1.20 s |
| 15′ | 1.11 s | 1.18 s | 1.51 s | 1.58 s |
Multiplicity of obscured signals is not labeled.
Signals are interchangeable.
1H NMR Spectroscopic Data (600 MHz, CDCl3) for Compounds 5–8a
| δH ( | ||||
|---|---|---|---|---|
| H | ||||
| 1 | 5.41 d (17.0) | 5.47 d (17.5) | 5.42 d (17.2) | 5.47 d (17.2) |
| 5.21 d (10.1) | 5.25 d (10.1) | 5.18 d (10.4) | 5.25 d (10.1) | |
| 2 | 5.80 ddd (16.9, 10.1, 5.3) | 5.94 ddd (16.4, 10.2, 5.4) | 5.81 ddd (17.0, 10.2, 4.8) | 5.94 ddd (16.1, 10.2, 5.4) |
| 3 | 4.82 d (4.4) | 4.93 d (4.6) | 4.79 br d (4.8) | 4.93 br t (5.8) |
| 8 | 5.17 d (8.4) | 5.08 d (8.2) | 5.20 d (8.5) | 4.97 d (7.1) |
| 9 | 5.50 dd (10.6, 8.5) | 5.41 t (9.5) | 5.51 dd (10.7, 8.4) | 5.41 |
| 10 | 5.59 dt (10.8, 7.5) | 5.51 m | 5.60 dt (10.7, 7.5) | 5.44 |
| 11 | 2.09 q (7.2) | 2.08 | 2.11 q (7.7) | 2.07 m |
| 12 | 1.38 p (6.9) | 1.38 | 1.38 | 1.38 |
| 13 | 1.28 | 1.28 | 1.28 | 1.29 |
| 14 | 1.28 | 1.28 | 1.28 | 1.29 |
| 15 | 1.26 | 1.26 | 1.26 | 1.27 |
| 16 | 1.29 | 1.29 | 1.29 | 1.29 |
| 17 | 0.88 t (6.9) | 0.88 t (6.8) | 0.88 t (6.8) | 0.89 t (6.8) |
| OH-3 | 1.91 d (6.5) | |||
| OH-8 | 1.85 | |||
| 1′ | 3.32 dd (10.9, 4.1) | 3.36 dd (11.5, 3.8) | 2.04 m | 1.94 td (10.5,2.2) |
| 2′ | 1.72 m | 1.75 dq (12.5, 4.0) | 1.85 m | 1.82 m |
| 1.57 | 1.57 dt (15.0, 3.4) | 1.61 m | 1.48 m | |
| 3′ | 2.00 m | 2.08 | 1.66 | 1.66 |
| 1.54 | 1.89 td (13.6, 3.9) | |||
| 5′ | 1.78 d (10.9) | 1.83 d (10.8) | 1.80 t (9.7) | 1.80 t (9.6) |
| 6′ | 4.27 ddd (10.4, 3.7, 2.6) | 4.19 ddd (10.4, 4.3, 3.2) | 4.14 dd (8.7, 4.5) | 4.13 |
| 7′ | 1.66 | 1.62 m | 1.07 m | 1.06 m |
| 8′ | 1.67 | 1.66 m | 1.40 m | 1.40 |
| 1.54 | 1.52 | |||
| 9′ | 1.52 | 1.51 | 1.95 dd (13.2, 5.3) | 2.01 dd (12.6, 5.8) |
| 1.28 | 1.29 | 1.54 m | 1.50 | |
| 11′ | 1.98 m | 1.99 dq (13.9,6.6) | 1.68 | 1.67 |
| 12′ | 0.93 d (6.7) | 0.93 d (6.7) | 0.99 d (6.5) | 0.98 d (6.6) |
| 13′ | 1.10 d (6.6) | 1.09 d (6.5) | 1.04 d (6.6) | 1.03 d (6.6) |
| 14′ | 0.99 s | 0.98 s | 1.25 s | 1.32 s |
| 15′ | 1.53 s | 1.39 s | 1.28 s | 1.26 s |
| OH-1′ | 2.36 br s | 2.39 br s | ||
| OH-4′ | 2.37 s | |||
| OH-6′ | 4.76 d (2.6) | 4.66 d (3.1) | 2.23 s | |
Multiplicity of obscured signals is not labeled.
Signals are interchangeable.
1H NMR Spectroscopic Data (600 MHz, CDCl3) for Compounds 9–11a
| δH ( | |||
|---|---|---|---|
| H | |||
| 1 | 5.47 d (16.6) | 5.49 d (18.0) | 5.57 (17.5) |
| 5.26 d (10.2) | 5.24 d (10.7) | 5.30 (10.1) | |
| 2 | 5.93 ddd (16.1, 10.2, 5.3) | 6.11 ddd (16.8, 10.3, 6.2) | 6.10 m |
| 3 | 4.93 br s | 5.80 d (6.1) | 5.18 br s |
| 8 | 6.28 d (9.1) | 5.49 d (8.7) | 6.13 d (9.2) |
| 9 | 5.56 t (9.7) | 5.70 t (10.7, 8.4) | 5.53 t (10.2) |
| 10 | 5.70 dt (10.9, 7.6) | 5.65 dt (10.7, 7.3) | 5.74 m |
| 11 | 2.19 m | 2.21 q (7.3) | 2.46 m, 2.25 m |
| 12 | 1.39 m | 1.43 p (7.3) | 1.49 |
| 13 | 1.29 | 1.31 | 1.33 |
| 14 | 1.29 | 1.31 | 1.31 |
| 15 | 1.25 | 1.25 | 1.28 |
| 16 | 1.27 | 1.28 | 1.30 |
| 17 | 0.87 t | 0.85 t (6.8) | 0.89 |
| OH-3 | |||
| OH-8 | |||
| 2′ | 7.03 s | 7.08 s | 7.10 s |
| 5′ | 6.92 d (8.2) | 7.72 s | 7.72 s |
| 6′ | 7.07 br d (8.3) | ||
| 7′ | 7.65 d (15.8) | 7.46 s | 7.48 s |
| 8′ | 6.28 d (15.4) | ||
| 9′ | 5.27d (12.2) | 5.26 d (11.9) | |
| 5.17d (12.1) | 5.13 d (12.4) | ||
| OH-4′ | 5.96 s | ||
| OMe-3′ | 3.93 s | 4.02 s | 4.03 s |
Multiplicity of obscured signals is not labeled.
Signals are interchangeable.