Literature DB >> 25333161

2D view aggregation for lymph node detection using a shallow hierarchy of linear classifiers.

Ari Seff, Le Lu, Kevin M Cherry, Holger R Roth, Jiamin Liu, Shijun Wang, Joanne Hoffman, Evrim B Turkbey, Ronald M Summers.   

Abstract

Enlarged lymph nodes (LNs) can provide important information for cancer diagnosis, staging, and measuring treatment reactions, making automated detection a highly sought goal. In this paper, we propose a new algorithm representation of decomposing the LN detection problem into a set of 2D object detection subtasks on sampled CT slices, largely alleviating the curse of dimensionality issue. Our 2D detection can be effectively formulated as linear classification on a single image feature type of Histogram of Oriented Gradients (HOG), covering a moderate field-of-view of 45 by 45 voxels. We exploit both max-pooling and sparse linear fusion schemes to aggregate these 2D detection scores for the final 3D LN detection. In this manner, detection is more tractable and does not need to perform perfectly at instance level (as weak hypotheses) since our aggregation process will robustly harness collective information for LN detection. Two datasets (90 patients with 389 mediastinal LNs and 86 patients with 595 abdominal LNs) are used for validation. Cross-validation demonstrates 78.0% sensitivity at 6 false positives/volume (FP/vol.) (86.1% at 10 FP/vol.) and 73.1% sensitivity at 6 FP/vol. (87.2% at 10 FP/vol.), for the mediastinal and abdominal datasets respectively. Our results compare favorably to previous state-of-the-art methods.

Entities:  

Mesh:

Year:  2014        PMID: 25333161      PMCID: PMC4350911          DOI: 10.1007/978-3-319-10404-1_68

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  7 in total

1.  Automatic detection and segmentation of lymph nodes from CT data.

Authors:  Adrian Barbu; Michael Suehling; Xun Xu; David Liu; S Kevin Zhou; Dorin Comaniciu
Journal:  IEEE Trans Med Imaging       Date:  2011-10-03       Impact factor: 10.048

2.  Object detection with discriminatively trained part-based models.

Authors:  Pedro F Felzenszwalb; Ross B Girshick; David McAllester; Deva Ramanan
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-09       Impact factor: 6.226

3.  Automated extraction of lymph nodes from 3-D abdominal CT images using 3-D minimum directional difference filter.

Authors:  Takayuki Kitasaka; Yukihiro Tsujimura; Yoshihiko Nakamura; Kensaku Mori; Yasuhito Suenaga; Masaaki Ito; Shigeru Nawano
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

4.  Mediastinal atlas creation from 3-D chest computed tomography images: application to automated detection and station mapping of lymph nodes.

Authors:  Marco Feuerstein; Ben Glocker; Takayuki Kitasaka; Yoshihiko Nakamura; Shingo Iwano; Kensaku Mori
Journal:  Med Image Anal       Date:  2011-05-19       Impact factor: 8.545

5.  Lymph node detection and segmentation in chest CT data using discriminative learning and a spatial prior.

Authors:  Johannes Feulner; S Kevin Zhou; Matthias Hammon; Joachim Hornegger; Dorin Comaniciu
Journal:  Med Image Anal       Date:  2012-11-21       Impact factor: 8.545

6.  A new 2.5D representation for lymph node detection using random sets of deep convolutional neural network observations.

Authors:  Holger R Roth; Le Lu; Ari Seff; Kevin M Cherry; Joanne Hoffman; Shijun Wang; Jiamin Liu; Evrim Turkbey; Ronald M Summers
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

7.  New response evaluation criteria in solid tumours: revised RECIST guideline (version 1.1).

Authors:  E A Eisenhauer; P Therasse; J Bogaerts; L H Schwartz; D Sargent; R Ford; J Dancey; S Arbuck; S Gwyther; M Mooney; L Rubinstein; L Shankar; L Dodd; R Kaplan; D Lacombe; J Verweij
Journal:  Eur J Cancer       Date:  2009-01       Impact factor: 9.162

  7 in total
  14 in total

Review 1.  Progress in Fully Automated Abdominal CT Interpretation.

Authors:  Ronald M Summers
Journal:  AJR Am J Roentgenol       Date:  2016-04-21       Impact factor: 3.959

2.  Patch-based Convolutional Neural Network for Whole Slide Tissue Image Classification.

Authors:  Le Hou; Dimitris Samaras; Tahsin M Kurc; Yi Gao; James E Davis; Joel H Saltz
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2016 Jun-Jul

3.  Learning-based deformable image registration: effect of statistical mismatch between train and test images.

Authors:  Michael D Ketcha; Tharindu De Silva; Runze Han; Ali Uneri; Sebastian Vogt; Gerhard Kleinszig; Jeffrey H Siewerdsen
Journal:  J Med Imaging (Bellingham)       Date:  2019-12-17

4.  A new 2.5D representation for lymph node detection using random sets of deep convolutional neural network observations.

Authors:  Holger R Roth; Le Lu; Ari Seff; Kevin M Cherry; Joanne Hoffman; Shijun Wang; Jiamin Liu; Evrim Turkbey; Ronald M Summers
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

5.  Effects of phase aberration on transabdominal focusing for a large aperture, lowf-number histotripsy transducer.

Authors:  Ellen Yeats; Dinank Gupta; Zhen Xu; Timothy L Hall
Journal:  Phys Med Biol       Date:  2022-07-19       Impact factor: 4.174

6.  Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning.

Authors:  Hoo-Chang Shin; Holger R Roth; Mingchen Gao; Le Lu; Ziyue Xu; Isabella Nogues; Jianhua Yao; Daniel Mollura; Ronald M Summers
Journal:  IEEE Trans Med Imaging       Date:  2016-02-11       Impact factor: 10.048

7.  Planning, guidance, and quality assurance of pelvic screw placement using deformable image registration.

Authors:  J Goerres; A Uneri; M Jacobson; B Ramsay; T De Silva; M Ketcha; R Han; A Manbachi; S Vogt; G Kleinszig; J-P Wolinsky; G Osgood; J H Siewerdsen
Journal:  Phys Med Biol       Date:  2017-11-13       Impact factor: 3.609

8.  Improving Computer-Aided Detection Using Convolutional Neural Networks and Random View Aggregation.

Authors:  Holger R Roth; Le Lu; Jiamin Liu; Jianhua Yao; Ari Seff; Kevin Cherry; Lauren Kim; Ronald M Summers
Journal:  IEEE Trans Med Imaging       Date:  2015-09-28       Impact factor: 10.048

9.  Mediastinal lymph node detection and station mapping on chest CT using spatial priors and random forest.

Authors:  Jiamin Liu; Joanne Hoffman; Jocelyn Zhao; Jianhua Yao; Le Lu; Lauren Kim; Evrim B Turkbey; Ronald M Summers
Journal:  Med Phys       Date:  2016-07       Impact factor: 4.071

10.  Atlas-based automatic planning and 3D-2D fluoroscopic guidance in pelvic trauma surgery.

Authors:  R Han; A Uneri; T De Silva; M Ketcha; J Goerres; S Vogt; G Kleinszig; G Osgood; J H Siewerdsen
Journal:  Phys Med Biol       Date:  2019-05-02       Impact factor: 4.174

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.