Literature DB >> 25314565

Pattern formation by phase-field relaxation of bending energy with fixed surface area and volume.

Timothy Banham1, Bo Li2, Yanxiang Zhao3.   

Abstract

We explore a wide variety of patterns of closed surfaces that minimize the elastic bending energy with fixed surface area and volume. To avoid complicated discretization and numerical instabilities for sharp surfaces, we reformulate the underlying constrained minimization problem by constructing phase-field functionals of bending energy with penalty terms for the constraints and develop stable numerical methods to relax these functionals. We report our extensive computational results with different initial surfaces. These results are discussed in terms of the reduced volume and are compared with the known results obtained using the sharp-interface approach. Finally, we discuss the implications of our numerical findings.

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Year:  2014        PMID: 25314565      PMCID: PMC4288938          DOI: 10.1103/PhysRevE.90.033308

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  19 in total

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3.  Phase-field approach to implicit solvation of biomolecules with Coulomb-field approximation.

Authors:  Yanxiang Zhao; Yuen-Yick Kwan; Jianwei Che; Bo Li; J Andrew McCammon
Journal:  J Chem Phys       Date:  2013-07-14       Impact factor: 3.488

4.  Variational Implicit Solvation with Solute Molecular Mechanics: From Diffuse-Interface to Sharp-Interface Models.

Authors:  Bo Li; Yanxiang Zhao
Journal:  SIAM J Appl Math       Date:  2013       Impact factor: 2.080

5.  Adhesion of vesicles in two dimensions.

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Journal:  Phys Rev A       Date:  1991-06-15       Impact factor: 3.140

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Authors:  H J Deuling; W Helfrich
Journal:  Biophys J       Date:  1976-08       Impact factor: 4.033

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Journal:  Biophys J       Date:  1974-12       Impact factor: 4.033

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Authors:  P B Canham
Journal:  J Theor Biol       Date:  1970-01       Impact factor: 2.691

9.  Bending elastic modulus of red blood cell membrane derived from buckling instability in micropipet aspiration tests.

Authors:  E A Evans
Journal:  Biophys J       Date:  1983-07       Impact factor: 4.033

10.  Computational model for cell morphodynamics.

Authors:  Danying Shao; Wouter-Jan Rappel; Herbert Levine
Journal:  Phys Rev Lett       Date:  2010-09-02       Impact factor: 9.161

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  2 in total

1.  A self-consistent phase-field approach to implicit solvation of charged molecules with Poisson-Boltzmann electrostatics.

Authors:  Hui Sun; Jiayi Wen; Yanxiang Zhao; Bo Li; J Andrew McCammon
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

Review 2.  Modeling Membrane Curvature Generation due to Membrane⁻Protein Interactions.

Authors:  Haleh Alimohamadi; Padmini Rangamani
Journal:  Biomolecules       Date:  2018-10-23
  2 in total

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