Literature DB >> 25309286

Crystal structure of 5-amino-5'-chloro-6-(4-chloro-benzo-yl)-8-nitro-2,3-di-hydro-1H-spiro-[imidazo[1,2-a]pyridine-7,3'-indolin]-2'-one including an unknown solvent mol-ecule.

R A Nagalakshmi1, J Suresh1, S Sivakumar2, R Ranjith Kumar2, P L Nilantha Lakshman3.   

Abstract

The asymmetric unit of the title compound, C21H15Cl2N5O4, contains two independent mol-ecules (A and B) having similar conformations. The amine (NH2) group forms an intra-molecular hydrogen bond with the benzoyl group, giving an S(6) ring motif in both mol-ecules. The central six-membered rings adopt sofa conformations and the imidazole rings are planar (r.m.s deviations = 0.0150 and 0.0166 Å). The pyridine and imidazole rings are inclined to one another by 3.54 (1) and 3.03 (1)° in mol-ecules A and B, respectively. In the crystal, mol-ecules are linked by N-H⋯O hydrogen bonds, forming chains along the a axis which enclose R 2 (2)(16) ring motifs. The rings are linked by weak N-H⋯O and C-H⋯O hydrogen bonds and C-H⋯π inter-actions forming sheets lying parallel to (001). A region of disordered electron density, most probably disordered solvent mol-ecules, occupying voids of ca 753 Å(3) for an electron count of 260, was treated using the SQUEEZE routine in PLATON [Spek (2009 ▶). Acta Cryst. D65, 148-155]. Their formula mass and unit-cell characteristics were not taken into account during refinement.

Entities:  

Keywords:  crystal structure; hydrogen bonding; imidazole; pyridine-indoline C—H⋯π inter­actions; spiro

Year:  2014        PMID: 25309286      PMCID: PMC4186207          DOI: 10.1107/S1600536814017486

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a similar structure, a pharmacologically active pyridine-related compound, see: Nagalakshmi et al. (2014 ▶).

Experimental

Crystal data

C21H15Cl2N5O4 M = 472.28 Triclinic, a = 12.9805 (7) Å b = 13.2085 (8) Å c = 16.7175 (10) Å α = 105.713 (2)° β = 103.367 (2)° γ = 91.051 (2)° V = 2674.4 (3) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 293 K 0.21 × 0.19 × 0.18 mm

Data collection

Bruker Kappa APEXII diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2004 ▶) T min = 0.967, T max = 0.974 87748 measured reflections 11499 independent reflections 7063 reflections with I > 2σ(I) R int = 0.044

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.181 S = 1.11 11499 reflections 577 parameters 2 restraints H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.31 e Å−3

Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814017486/su2757sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814017486/su2757Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814017486/su2757Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814017486/su2757fig1.tif The mol­ecular structure of mol­ecule A of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 20% probability level. H-atoms have been omitted for clarity. Click here for additional data file. . DOI: 10.1107/S1600536814017486/su2757fig2.tif The mol­ecular structure of mol­ecule B of the title compound, with atom labelling. Displacement ellipsoids are drawn at the 20% probability level. H-atoms have been omitted for clarity. Click here for additional data file. . DOI: 10.1107/S1600536814017486/su2757fig3.tif A view along the a axis of the crystal packing of the title compound. Dashed bonds represent N-H⋯O hydrogen bonds (see Table 1 for details; C bound H atoms have been omitted for clarity). CCDC reference: 1016869 Additional supporting information: crystallographic information; 3D view; checkCIF report
C21H15Cl2N5O4Z = 4
Mr = 472.28F(000) = 968
Triclinic, P1Dx = 1.173 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 12.9805 (7) ÅCell parameters from 2000 reflections
b = 13.2085 (8) Åθ = 2–31°
c = 16.7175 (10) ŵ = 0.27 mm1
α = 105.713 (2)°T = 293 K
β = 103.367 (2)°Block, colourless
γ = 91.051 (2)°0.21 × 0.19 × 0.18 mm
V = 2674.4 (3) Å3
Bruker Kappa APEXII diffractometer11499 independent reflections
Radiation source: fine-focus sealed tube7063 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.044
Detector resolution: 0 pixels mm-1θmax = 26.9°, θmin = 1.6°
ω and φ scansh = −16→16
Absorption correction: multi-scan (SADABS; Bruker, 2004)k = −16→16
Tmin = 0.967, Tmax = 0.974l = −21→21
87748 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.058Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.181H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0894P)2 + 0.2555P] where P = (Fo2 + 2Fc2)/3
11499 reflections(Δ/σ)max < 0.001
577 parametersΔρmax = 0.38 e Å3
2 restraintsΔρmin = −0.31 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
C1A0.73023 (17)0.01119 (19)0.11139 (15)0.0368 (5)
C1B0.25621 (18)0.57859 (18)0.12320 (15)0.0374 (5)
C2A0.72616 (16)0.11182 (17)0.17862 (14)0.0316 (5)
C2B0.24268 (17)0.51805 (17)0.18571 (15)0.0346 (5)
C3A0.61102 (16)0.13082 (17)0.18449 (15)0.0338 (5)
C3B0.12348 (17)0.50010 (17)0.18260 (14)0.0331 (5)
C4A0.53098 (17)0.04635 (18)0.14696 (16)0.0369 (5)
C4B0.04671 (18)0.55272 (17)0.13823 (15)0.0351 (5)
C5A0.64378 (18)−0.06481 (18)0.07503 (15)0.0374 (5)
C5B0.17571 (19)0.62288 (18)0.07933 (15)0.0376 (5)
C6A0.5327 (2)−0.2160 (2)0.0028 (2)0.0587 (7)
H10.5385−0.27830.02320.070*
H20.4997−0.2371−0.05820.070*
C6B0.0723 (2)0.7147 (2)−0.00442 (19)0.0544 (7)
H30.04820.6875−0.06630.065*
H40.07460.79110.01150.065*
C7A0.4711 (2)−0.1373 (2)0.05076 (18)0.0514 (7)
H50.4109−0.11950.01190.062*
H60.4456−0.16400.09200.062*
C7B0.0004 (2)0.6690 (2)0.03965 (17)0.0464 (6)
H7−0.02750.72440.07810.056*
H8−0.05820.6229−0.00180.056*
C8A0.78204 (18)0.20686 (19)0.15986 (16)0.0387 (6)
C8B0.2955 (2)0.4118 (2)0.16477 (18)0.0431 (6)
C9A0.87762 (17)0.19669 (18)0.28932 (15)0.0346 (5)
C9B0.38129 (18)0.5008 (2)0.30110 (17)0.0419 (6)
C10A0.79719 (16)0.11549 (17)0.26521 (14)0.0313 (5)
C10B0.30771 (17)0.56908 (18)0.27676 (15)0.0352 (5)
C11A0.78829 (18)0.05466 (18)0.31873 (15)0.0366 (5)
H11A0.73470.00030.30300.044*
C11B0.29907 (19)0.66252 (19)0.33363 (16)0.0410 (6)
H11B0.25030.70860.31790.049*
C12A0.8622 (2)0.0776 (2)0.39682 (16)0.0450 (6)
C12B0.3646 (2)0.6868 (2)0.41515 (17)0.0515 (6)
C13A0.9416 (2)0.1583 (2)0.42154 (18)0.0540 (7)
H13A0.98850.17320.47530.065*
C13B0.4378 (2)0.6207 (3)0.44003 (19)0.0598 (7)
H13B0.48050.63920.49570.072*
C14A0.9517 (2)0.2178 (2)0.36629 (17)0.0480 (6)
H14A1.00700.27030.38110.058*
C14B0.4481 (2)0.5263 (2)0.3822 (2)0.0570 (7)
H14B0.49850.48150.39770.068*
C31A0.58488 (19)0.2271 (2)0.23432 (18)0.0440 (6)
C31B0.08794 (18)0.43654 (18)0.22841 (15)0.0378 (5)
C32A0.6616 (2)0.32226 (19)0.27750 (18)0.0447 (6)
C32B0.15700 (18)0.36977 (19)0.27329 (16)0.0384 (6)
C33A0.7186 (2)0.3388 (2)0.36101 (19)0.0568 (7)
H33A0.71200.28920.39020.068*
C33B0.2000 (2)0.4052 (2)0.36081 (17)0.0512 (7)
H33B0.19200.47370.39100.061*
C34A0.7868 (3)0.4317 (3)0.4018 (2)0.0725 (9)
H34A0.82460.44410.45860.087*
C34B0.2551 (2)0.3383 (3)0.4037 (2)0.0655 (8)
H34B0.28490.36220.46250.079*
C35A0.7976 (3)0.5016 (2)0.3598 (2)0.0720 (9)
C35B0.2651 (3)0.2381 (3)0.3594 (2)0.0705 (9)
C36A0.7365 (3)0.4889 (2)0.2770 (2)0.0674 (9)
H36A0.74090.54070.24930.081*
C36B0.2220 (2)0.2015 (2)0.2736 (2)0.0613 (8)
H36B0.22960.13260.24410.074*
C37A0.6699 (2)0.3989 (2)0.2368 (2)0.0553 (7)
H37A0.62950.38930.18120.066*
C37B0.1672 (2)0.2668 (2)0.23076 (18)0.0522 (7)
H37B0.13660.24130.17230.063*
N1A0.82389 (17)−0.01200 (18)0.09059 (15)0.0521 (6)
N1B0.35638 (17)0.59169 (17)0.11129 (14)0.0462 (5)
N2A0.43450 (16)0.05275 (18)0.15897 (17)0.0598 (7)
H90.38720.00040.13390.072*
H100.41860.10930.19190.072*
N2B−0.05243 (15)0.55052 (17)0.14117 (14)0.0487 (5)
H11−0.09620.58340.11230.058*
H12−0.07430.51620.17200.058*
N3A0.86499 (15)0.24959 (15)0.22690 (13)0.0396 (5)
H3A0.90560.30370.23060.047*
N3B0.37179 (15)0.41016 (16)0.23522 (15)0.0455 (5)
H3B0.40990.35810.23820.055*
N4A0.54899 (14)−0.04556 (15)0.09405 (13)0.0380 (5)
N4B0.07354 (15)0.60967 (15)0.08717 (13)0.0389 (5)
N5A0.63672 (17)−0.15890 (16)0.02111 (14)0.0494 (5)
H5A0.6877−0.1842−0.00100.059*
N5B0.17403 (17)0.68062 (16)0.02601 (13)0.0470 (5)
H5B0.22970.69650.01080.056*
O1A0.83315 (16)−0.09805 (16)0.03680 (14)0.0713 (6)
O1B0.37291 (15)0.64175 (16)0.06023 (14)0.0649 (6)
O2A0.90296 (14)0.05404 (16)0.12491 (13)0.0658 (6)
O2B0.43195 (15)0.55275 (17)0.15150 (14)0.0625 (5)
O3A0.75237 (14)0.23385 (15)0.09537 (11)0.0525 (5)
O3B0.27203 (16)0.34371 (14)0.09631 (13)0.0573 (5)
O4A0.49204 (14)0.24063 (15)0.24575 (16)0.0674 (6)
O4B−0.00657 (13)0.42797 (14)0.23356 (12)0.0522 (5)
Cl10.85274 (7)0.00066 (7)0.46504 (5)0.0701 (2)
Cl20.88459 (12)0.61410 (9)0.40925 (9)0.1355 (5)
Cl30.35428 (8)0.80620 (7)0.48853 (5)0.0795 (3)
Cl40.33373 (11)0.15562 (10)0.41399 (9)0.1317 (5)
U11U22U33U12U13U23
C1A0.0333 (12)0.0421 (14)0.0393 (13)−0.0009 (10)0.0141 (10)0.0147 (11)
C1B0.0401 (13)0.0322 (12)0.0439 (14)0.0005 (10)0.0169 (11)0.0121 (11)
C2A0.0291 (11)0.0337 (12)0.0363 (12)−0.0016 (9)0.0094 (9)0.0161 (10)
C2B0.0329 (12)0.0300 (12)0.0437 (13)0.0007 (9)0.0127 (10)0.0126 (10)
C3A0.0276 (11)0.0340 (12)0.0452 (14)0.0001 (9)0.0082 (10)0.0211 (11)
C3B0.0331 (11)0.0306 (12)0.0387 (13)0.0021 (9)0.0119 (10)0.0121 (10)
C4A0.0266 (11)0.0384 (13)0.0527 (15)0.0051 (10)0.0086 (10)0.0250 (12)
C4B0.0377 (12)0.0266 (11)0.0428 (13)−0.0002 (9)0.0147 (10)0.0092 (10)
C5A0.0448 (14)0.0368 (13)0.0352 (13)−0.0020 (10)0.0086 (11)0.0190 (11)
C5B0.0462 (14)0.0284 (12)0.0378 (13)−0.0081 (10)0.0140 (11)0.0062 (10)
C6A0.0625 (18)0.0456 (16)0.0588 (18)−0.0109 (14)0.0047 (14)0.0091 (14)
C6B0.0631 (18)0.0467 (16)0.0551 (17)−0.0054 (13)0.0046 (14)0.0262 (14)
C7A0.0420 (14)0.0478 (16)0.0583 (17)−0.0159 (12)−0.0021 (12)0.0185 (13)
C7B0.0533 (15)0.0392 (14)0.0484 (15)0.0080 (12)0.0071 (12)0.0195 (12)
C8A0.0370 (13)0.0404 (13)0.0458 (15)−0.0007 (10)0.0135 (11)0.0210 (12)
C8B0.0468 (14)0.0382 (14)0.0528 (16)0.0038 (11)0.0258 (13)0.0153 (13)
C9A0.0287 (11)0.0335 (12)0.0433 (14)0.0022 (9)0.0117 (10)0.0111 (10)
C9B0.0337 (12)0.0458 (15)0.0560 (16)0.0050 (11)0.0159 (12)0.0264 (13)
C10A0.0272 (11)0.0329 (12)0.0373 (12)0.0051 (9)0.0106 (9)0.0135 (10)
C10B0.0304 (11)0.0336 (12)0.0472 (14)0.0001 (9)0.0122 (10)0.0185 (11)
C11A0.0354 (12)0.0375 (13)0.0398 (13)0.0017 (10)0.0122 (10)0.0133 (11)
C11B0.0403 (13)0.0382 (14)0.0480 (15)0.0041 (11)0.0134 (12)0.0158 (12)
C12A0.0464 (14)0.0518 (16)0.0438 (15)0.0127 (12)0.0123 (12)0.0234 (12)
C12B0.0568 (16)0.0493 (13)0.0458 (16)−0.0084 (13)0.0116 (13)0.0109 (10)
C13A0.0505 (16)0.0576 (17)0.0457 (16)0.0044 (13)−0.0027 (13)0.0135 (14)
C13B0.0502 (16)0.0732 (17)0.0550 (18)−0.0099 (15)−0.0002 (13)0.0286 (13)
C14A0.0411 (14)0.0469 (15)0.0494 (16)−0.0024 (12)0.0022 (12)0.0108 (13)
C14B0.0417 (14)0.0625 (15)0.076 (2)0.0026 (13)0.0063 (14)0.0413 (13)
C31A0.0343 (13)0.0439 (15)0.0621 (17)0.0059 (11)0.0152 (12)0.0258 (13)
C31B0.0384 (13)0.0347 (13)0.0426 (14)−0.0016 (10)0.0127 (11)0.0125 (11)
C32A0.0450 (14)0.0359 (14)0.0596 (17)0.0096 (11)0.0250 (13)0.0134 (12)
C32B0.0352 (12)0.0405 (14)0.0468 (15)−0.0007 (10)0.0130 (11)0.0222 (12)
C33A0.0646 (18)0.0522 (17)0.0576 (19)0.0059 (14)0.0272 (15)0.0118 (14)
C33B0.0536 (16)0.0526 (17)0.0474 (16)−0.0011 (13)0.0112 (13)0.0157 (13)
C34A0.086 (2)0.068 (2)0.0472 (18)−0.0129 (18)0.0137 (16)−0.0079 (16)
C34B0.0640 (19)0.071 (2)0.0616 (19)−0.0087 (16)−0.0005 (15)0.0338 (17)
C35A0.081 (2)0.0463 (18)0.081 (2)−0.0130 (16)0.033 (2)−0.0047 (17)
C35B0.065 (2)0.066 (2)0.085 (3)0.0012 (16)−0.0011 (18)0.046 (2)
C36A0.081 (2)0.0403 (16)0.083 (2)−0.0071 (15)0.0272 (19)0.0157 (16)
C36B0.0632 (18)0.0380 (15)0.085 (2)0.0083 (14)0.0178 (17)0.0209 (16)
C37A0.0612 (17)0.0410 (15)0.0678 (19)0.0065 (13)0.0170 (15)0.0209 (14)
C37B0.0610 (17)0.0420 (15)0.0532 (17)−0.0061 (13)0.0111 (13)0.0164 (13)
N1A0.0467 (13)0.0525 (14)0.0562 (14)−0.0067 (11)0.0252 (11)0.0036 (12)
N1B0.0464 (12)0.0459 (12)0.0585 (14)0.0024 (10)0.0261 (11)0.0238 (11)
N2A0.0328 (11)0.0460 (13)0.102 (2)0.0006 (10)0.0170 (12)0.0228 (13)
N2B0.0347 (11)0.0559 (14)0.0679 (15)0.0057 (10)0.0138 (10)0.0365 (12)
N3A0.0358 (11)0.0369 (11)0.0478 (12)−0.0079 (9)0.0113 (9)0.0148 (9)
N3B0.0367 (11)0.0390 (12)0.0701 (15)0.0128 (9)0.0203 (11)0.0242 (11)
N4A0.0333 (10)0.0332 (11)0.0465 (12)−0.0054 (8)0.0038 (9)0.0150 (9)
N4B0.0395 (11)0.0374 (11)0.0458 (12)0.0034 (9)0.0114 (9)0.0207 (9)
N5A0.0550 (13)0.0415 (13)0.0496 (13)−0.0063 (10)0.0164 (11)0.0072 (11)
N5B0.0540 (13)0.0450 (12)0.0484 (13)−0.0026 (10)0.0123 (10)0.0245 (10)
O1A0.0693 (13)0.0580 (13)0.0798 (15)−0.0087 (10)0.0425 (12)−0.0111 (11)
O1B0.0609 (12)0.0743 (14)0.0861 (15)0.0016 (10)0.0382 (11)0.0497 (12)
O2A0.0440 (11)0.0638 (13)0.0797 (15)−0.0131 (10)0.0311 (10)−0.0082 (11)
O2B0.0429 (10)0.0775 (14)0.0871 (15)0.0110 (10)0.0309 (10)0.0434 (12)
O3A0.0560 (11)0.0606 (12)0.0487 (11)−0.0107 (9)0.0099 (9)0.0320 (10)
O3B0.0764 (13)0.0379 (10)0.0635 (13)0.0091 (9)0.0317 (11)0.0116 (10)
O4A0.0416 (10)0.0435 (11)0.1263 (19)0.0142 (8)0.0356 (12)0.0259 (12)
O4B0.0394 (10)0.0571 (11)0.0744 (13)0.0009 (8)0.0194 (9)0.0379 (10)
Cl10.0825 (5)0.0836 (6)0.0548 (5)0.0085 (4)0.0105 (4)0.0422 (4)
Cl20.1648 (12)0.0872 (8)0.1189 (10)−0.0690 (8)0.0301 (8)−0.0201 (7)
Cl30.1047 (7)0.0664 (5)0.0559 (5)−0.0044 (5)0.0201 (4)−0.0011 (4)
Cl40.1366 (10)0.1045 (9)0.1475 (11)0.0217 (7)−0.0301 (8)0.0787 (8)
C1A—N1A1.358 (3)C11A—H11A0.9300
C1A—C5A1.396 (3)C11B—C12B1.379 (4)
C1A—C2A1.501 (3)C11B—H11B0.9300
C1B—C5B1.368 (3)C12A—C13A1.376 (4)
C1B—N1B1.375 (3)C12A—Cl11.743 (3)
C1B—C2B1.515 (3)C12B—C13B1.372 (4)
C2A—C10A1.514 (3)C12B—Cl31.745 (3)
C2A—C3A1.541 (3)C13A—C14A1.390 (4)
C2A—C8A1.577 (3)C13A—H13A0.9300
C2B—C10B1.521 (3)C13B—C14B1.385 (4)
C2B—C3B1.548 (3)C13B—H13B0.9300
C2B—C8B1.563 (3)C14A—H14A0.9300
C3A—C4A1.412 (3)C14B—H14B0.9300
C3A—C31A1.414 (3)C31A—O4A1.271 (3)
C3B—C4B1.410 (3)C31A—C32A1.491 (4)
C3B—C31B1.415 (3)C31B—O4B1.255 (3)
C4A—N2A1.314 (3)C31B—C32B1.490 (3)
C4A—N4A1.355 (3)C32A—C33A1.376 (4)
C4B—N2B1.299 (3)C32A—C37A1.379 (4)
C4B—N4B1.375 (3)C32B—C37B1.378 (4)
C5A—N5A1.310 (3)C32B—C33B1.383 (3)
C5A—N4A1.352 (3)C33A—C34A1.408 (4)
C5B—N5B1.318 (3)C33A—H33A0.9300
C5B—N4B1.375 (3)C33B—C34B1.391 (4)
C6A—N5A1.460 (3)C33B—H33B0.9300
C6A—C7A1.497 (4)C34A—C35A1.326 (5)
C6A—H10.9700C34A—H34A0.9300
C6A—H20.9700C34B—C35B1.355 (5)
C6B—N5B1.428 (3)C34B—H34B0.9300
C6B—C7B1.522 (4)C35A—C36A1.392 (5)
C6B—H30.9700C35A—Cl21.734 (3)
C6B—H40.9700C35B—C36B1.359 (4)
C7A—N4A1.469 (3)C35B—Cl41.736 (3)
C7A—H50.9700C36A—C37A1.369 (4)
C7A—H60.9700C36A—H36A0.9300
C7B—N4B1.470 (3)C36B—C37B1.373 (4)
C7B—H70.9700C36B—H36B0.9300
C7B—H80.9700C37A—H37A0.9300
C8A—O3A1.208 (3)C37B—H37B0.9300
C8A—N3A1.346 (3)N1A—O2A1.252 (3)
C8B—O3B1.218 (3)N1A—O1A1.271 (3)
C8B—N3B1.358 (3)N1B—O2B1.257 (3)
C9A—C14A1.372 (3)N1B—O1B1.264 (3)
C9A—N3A1.387 (3)N2A—H90.8600
C9A—C10A1.390 (3)N2A—H100.8600
C9B—N3B1.371 (3)N2B—H110.8600
C9B—C14B1.380 (4)N2B—H120.8600
C9B—C10B1.394 (3)N3A—H3A0.8600
C10A—C11A1.376 (3)N3B—H3B0.8600
C10B—C11B1.363 (3)N5A—H5A0.8600
C11A—C12A1.383 (3)N5B—H5B0.8600
N1A—C1A—C5A118.1 (2)C13B—C12B—C11B122.2 (3)
N1A—C1A—C2A119.2 (2)C13B—C12B—Cl3119.2 (2)
C5A—C1A—C2A122.4 (2)C11B—C12B—Cl3118.6 (2)
C5B—C1B—N1B118.0 (2)C12A—C13A—C14A120.1 (2)
C5B—C1B—C2B124.2 (2)C12A—C13A—H13A119.9
N1B—C1B—C2B117.7 (2)C14A—C13A—H13A119.9
C1A—C2A—C10A112.31 (18)C12B—C13B—C14B120.0 (3)
C1A—C2A—C3A111.22 (18)C12B—C13B—H13B120.0
C10A—C2A—C3A111.30 (17)C14B—C13B—H13B120.0
C1A—C2A—C8A109.75 (17)C9A—C14A—C13A118.0 (2)
C10A—C2A—C8A99.90 (17)C9A—C14A—H14A121.0
C3A—C2A—C8A111.88 (18)C13A—C14A—H14A121.0
C1B—C2B—C10B113.39 (18)C9B—C14B—C13B118.0 (3)
C1B—C2B—C3B110.24 (18)C9B—C14B—H14B121.0
C10B—C2B—C3B111.44 (18)C13B—C14B—H14B121.0
C1B—C2B—C8B109.31 (18)O4A—C31A—C3A122.5 (2)
C10B—C2B—C8B100.11 (19)O4A—C31A—C32A113.5 (2)
C3B—C2B—C8B112.00 (18)C3A—C31A—C32A124.0 (2)
C4A—C3A—C31A118.5 (2)O4B—C31B—C3B123.4 (2)
C4A—C3A—C2A119.3 (2)O4B—C31B—C32B112.48 (19)
C31A—C3A—C2A121.84 (19)C3B—C31B—C32B124.1 (2)
C4B—C3B—C31B117.4 (2)C33A—C32A—C37A119.1 (3)
C4B—C3B—C2B120.74 (19)C33A—C32A—C31A120.3 (2)
C31B—C3B—C2B121.8 (2)C37A—C32A—C31A120.4 (3)
N2A—C4A—N4A116.1 (2)C37B—C32B—C33B118.6 (2)
N2A—C4A—C3A122.5 (2)C37B—C32B—C31B120.4 (2)
N4A—C4A—C3A121.37 (19)C33B—C32B—C31B120.3 (2)
N2B—C4B—N4B115.5 (2)C32A—C33A—C34A119.3 (3)
N2B—C4B—C3B123.7 (2)C32A—C33A—H33A120.3
N4B—C4B—C3B120.8 (2)C34A—C33A—H33A120.3
N5A—C5A—N4A109.7 (2)C32B—C33B—C34B120.1 (3)
N5A—C5A—C1A130.0 (2)C32B—C33B—H33B120.0
N4A—C5A—C1A120.3 (2)C34B—C33B—H33B120.0
N5B—C5B—C1B132.2 (2)C35A—C34A—C33A120.4 (3)
N5B—C5B—N4B107.5 (2)C35A—C34A—H34A119.8
C1B—C5B—N4B120.3 (2)C33A—C34A—H34A119.8
N5A—C6A—C7A103.5 (2)C35B—C34B—C33B119.5 (3)
N5A—C6A—H1111.1C35B—C34B—H34B120.2
C7A—C6A—H1111.1C33B—C34B—H34B120.2
N5A—C6A—H2111.1C34A—C35A—C36A121.1 (3)
C7A—C6A—H2111.1C34A—C35A—Cl2120.3 (3)
H1—C6A—H2109.0C36A—C35A—Cl2118.6 (3)
N5B—C6B—C7B103.9 (2)C34B—C35B—C36B121.2 (3)
N5B—C6B—H3111.0C34B—C35B—Cl4118.9 (3)
C7B—C6B—H3111.0C36B—C35B—Cl4119.8 (3)
N5B—C6B—H4111.0C37A—C36A—C35A118.8 (3)
C7B—C6B—H4111.0C37A—C36A—H36A120.6
H3—C6B—H4109.0C35A—C36A—H36A120.6
N4A—C7A—C6A103.4 (2)C35B—C36B—C37B119.7 (3)
N4A—C7A—H5111.1C35B—C36B—H36B120.2
C6A—C7A—H5111.1C37B—C36B—H36B120.2
N4A—C7A—H6111.1C36A—C37A—C32A121.2 (3)
C6A—C7A—H6111.1C36A—C37A—H37A119.4
H5—C7A—H6109.1C32A—C37A—H37A119.4
N4B—C7B—C6B102.0 (2)C36B—C37B—C32B120.9 (3)
N4B—C7B—H7111.4C36B—C37B—H37B119.6
C6B—C7B—H7111.4C32B—C37B—H37B119.6
N4B—C7B—H8111.4O2A—N1A—O1A119.3 (2)
C6B—C7B—H8111.4O2A—N1A—C1A118.8 (2)
H7—C7B—H8109.2O1A—N1A—C1A122.0 (2)
O3A—C8A—N3A128.0 (2)O2B—N1B—O1B119.92 (19)
O3A—C8A—C2A123.8 (2)O2B—N1B—C1B119.3 (2)
N3A—C8A—C2A108.21 (19)O1B—N1B—C1B120.8 (2)
O3B—C8B—N3B126.7 (2)C4A—N2A—H9120.0
O3B—C8B—C2B125.1 (2)C4A—N2A—H10120.0
N3B—C8B—C2B108.2 (2)H9—N2A—H10120.0
C14A—C9A—N3A129.1 (2)C4B—N2B—H11120.0
C14A—C9A—C10A121.4 (2)C4B—N2B—H12120.0
N3A—C9A—C10A109.4 (2)H11—N2B—H12120.0
N3B—C9B—C14B128.8 (2)C8A—N3A—C9A112.49 (18)
N3B—C9B—C10B109.9 (2)C8A—N3A—H3A123.8
C14B—C9B—C10B121.2 (3)C9A—N3A—H3A123.8
C11A—C10A—C9A120.9 (2)C8B—N3B—C9B112.4 (2)
C11A—C10A—C2A129.1 (2)C8B—N3B—H3B123.8
C9A—C10A—C2A109.95 (18)C9B—N3B—H3B123.8
C11B—C10B—C9B120.4 (2)C5A—N4A—C4A123.45 (19)
C11B—C10B—C2B130.2 (2)C5A—N4A—C7A110.8 (2)
C9B—C10B—C2B109.3 (2)C4A—N4A—C7A125.7 (2)
C10A—C11A—C12A117.4 (2)C5B—N4B—C4B122.8 (2)
C10A—C11A—H11A121.3C5B—N4B—C7B111.89 (19)
C12A—C11A—H11A121.3C4B—N4B—C7B125.18 (19)
C10B—C11B—C12B118.2 (2)C5A—N5A—C6A112.5 (2)
C10B—C11B—H11B120.9C5A—N5A—H5A123.8
C12B—C11B—H11B120.9C6A—N5A—H5A123.8
C13A—C12A—C11A122.2 (2)C5B—N5B—C6B114.6 (2)
C13A—C12A—Cl1119.8 (2)C5B—N5B—H5B122.7
C11A—C12A—Cl1118.0 (2)C6B—N5B—H5B122.7
N1A—C1A—C2A—C10A−62.0 (3)Cl3—C12B—C13B—C14B−179.1 (2)
C5A—C1A—C2A—C10A111.6 (2)N3A—C9A—C14A—C13A174.2 (2)
N1A—C1A—C2A—C3A172.5 (2)C10A—C9A—C14A—C13A−2.7 (4)
C5A—C1A—C2A—C3A−13.9 (3)C12A—C13A—C14A—C9A3.1 (4)
N1A—C1A—C2A—C8A48.2 (3)N3B—C9B—C14B—C13B−175.6 (2)
C5A—C1A—C2A—C8A−138.2 (2)C10B—C9B—C14B—C13B2.0 (4)
C5B—C1B—C2B—C10B−117.6 (2)C12B—C13B—C14B—C9B−1.6 (4)
N1B—C1B—C2B—C10B60.9 (3)C4A—C3A—C31A—O4A−0.7 (4)
C5B—C1B—C2B—C3B8.1 (3)C2A—C3A—C31A—O4A−173.7 (2)
N1B—C1B—C2B—C3B−173.3 (2)C4A—C3A—C31A—C32A179.9 (2)
C5B—C1B—C2B—C8B131.6 (2)C2A—C3A—C31A—C32A6.9 (4)
N1B—C1B—C2B—C8B−49.8 (3)C4B—C3B—C31B—O4B−2.5 (4)
C1A—C2A—C3A—C4A16.1 (3)C2B—C3B—C31B—O4B173.4 (2)
C10A—C2A—C3A—C4A−110.0 (2)C4B—C3B—C31B—C32B175.4 (2)
C8A—C2A—C3A—C4A139.2 (2)C2B—C3B—C31B—C32B−8.8 (4)
C1A—C2A—C3A—C31A−171.0 (2)O4A—C31A—C32A—C33A88.0 (3)
C10A—C2A—C3A—C31A63.0 (3)C3A—C31A—C32A—C33A−92.6 (3)
C8A—C2A—C3A—C31A−47.8 (3)O4A—C31A—C32A—C37A−86.6 (3)
C1B—C2B—C3B—C4B−10.7 (3)C3A—C31A—C32A—C37A92.8 (3)
C10B—C2B—C3B—C4B116.1 (2)O4B—C31B—C32B—C37B88.3 (3)
C8B—C2B—C3B—C4B−132.7 (2)C3B—C31B—C32B—C37B−89.7 (3)
C1B—C2B—C3B—C31B173.6 (2)O4B—C31B—C32B—C33B−82.8 (3)
C10B—C2B—C3B—C31B−59.6 (3)C3B—C31B—C32B—C33B99.1 (3)
C8B—C2B—C3B—C31B51.7 (3)C37A—C32A—C33A—C34A−2.3 (4)
C31A—C3A—C4A—N2A−2.4 (3)C31A—C32A—C33A—C34A−177.0 (3)
C2A—C3A—C4A—N2A170.8 (2)C37B—C32B—C33B—C34B2.0 (4)
C31A—C3A—C4A—N4A175.7 (2)C31B—C32B—C33B—C34B173.3 (2)
C2A—C3A—C4A—N4A−11.1 (3)C32A—C33A—C34A—C35A−1.2 (5)
C31B—C3B—C4B—N2B3.9 (3)C32B—C33B—C34B—C35B−0.9 (4)
C2B—C3B—C4B—N2B−171.9 (2)C33A—C34A—C35A—C36A4.6 (5)
C31B—C3B—C4B—N4B−175.2 (2)C33A—C34A—C35A—Cl2−178.1 (2)
C2B—C3B—C4B—N4B8.9 (3)C33B—C34B—C35B—C36B−0.1 (5)
N1A—C1A—C5A—N5A−0.7 (4)C33B—C34B—C35B—Cl4−179.8 (2)
C2A—C1A—C5A—N5A−174.4 (2)C34A—C35A—C36A—C37A−4.5 (5)
N1A—C1A—C5A—N4A179.7 (2)Cl2—C35A—C36A—C37A178.2 (2)
C2A—C1A—C5A—N4A6.0 (3)C34B—C35B—C36B—C37B0.0 (5)
N1B—C1B—C5B—N5B−1.5 (4)Cl4—C35B—C36B—C37B179.6 (2)
C2B—C1B—C5B—N5B177.0 (2)C35A—C36A—C37A—C32A0.9 (4)
N1B—C1B—C5B—N4B178.2 (2)C33A—C32A—C37A—C36A2.4 (4)
C2B—C1B—C5B—N4B−3.2 (4)C31A—C32A—C37A—C36A177.1 (3)
N5A—C6A—C7A—N4A−2.3 (3)C35B—C36B—C37B—C32B1.2 (4)
N5B—C6B—C7B—N4B−2.6 (3)C33B—C32B—C37B—C36B−2.2 (4)
C1A—C2A—C8A—O3A61.2 (3)C31B—C32B—C37B—C36B−173.5 (2)
C10A—C2A—C8A—O3A179.4 (2)C5A—C1A—N1A—O2A−177.7 (2)
C3A—C2A—C8A—O3A−62.7 (3)C2A—C1A—N1A—O2A−3.8 (4)
C1A—C2A—C8A—N3A−118.9 (2)C5A—C1A—N1A—O1A3.1 (4)
C10A—C2A—C8A—N3A−0.7 (2)C2A—C1A—N1A—O1A177.0 (2)
C3A—C2A—C8A—N3A117.2 (2)C5B—C1B—N1B—O2B179.3 (2)
C1B—C2B—C8B—O3B−58.4 (3)C2B—C1B—N1B—O2B0.6 (3)
C10B—C2B—C8B—O3B−177.7 (2)C5B—C1B—N1B—O1B−1.1 (3)
C3B—C2B—C8B—O3B64.1 (3)C2B—C1B—N1B—O1B−179.8 (2)
C1B—C2B—C8B—N3B120.9 (2)O3A—C8A—N3A—C9A−178.5 (2)
C10B—C2B—C8B—N3B1.5 (2)C2A—C8A—N3A—C9A1.7 (3)
C3B—C2B—C8B—N3B−116.6 (2)C14A—C9A—N3A—C8A−179.1 (2)
C14A—C9A—C10A—C11A1.1 (3)C10A—C9A—N3A—C8A−2.0 (3)
N3A—C9A—C10A—C11A−176.27 (19)O3B—C8B—N3B—C9B177.7 (2)
C14A—C9A—C10A—C2A178.8 (2)C2B—C8B—N3B—C9B−1.5 (3)
N3A—C9A—C10A—C2A1.4 (2)C14B—C9B—N3B—C8B178.6 (2)
C1A—C2A—C10A—C11A−66.7 (3)C10B—C9B—N3B—C8B0.8 (3)
C3A—C2A—C10A—C11A58.7 (3)N5A—C5A—N4A—C4A−178.6 (2)
C8A—C2A—C10A—C11A177.0 (2)C1A—C5A—N4A—C4A1.0 (3)
C1A—C2A—C10A—C9A115.8 (2)N5A—C5A—N4A—C7A2.0 (3)
C3A—C2A—C10A—C9A−118.7 (2)C1A—C5A—N4A—C7A−178.3 (2)
C8A—C2A—C10A—C9A−0.4 (2)N2A—C4A—N4A—C5A−180.0 (2)
N3B—C9B—C10B—C11B176.9 (2)C3A—C4A—N4A—C5A1.8 (3)
C14B—C9B—C10B—C11B−1.1 (3)N2A—C4A—N4A—C7A−0.8 (3)
N3B—C9B—C10B—C2B0.3 (2)C3A—C4A—N4A—C7A−179.0 (2)
C14B—C9B—C10B—C2B−177.7 (2)C6A—C7A—N4A—C5A0.4 (3)
C1B—C2B—C10B—C11B66.5 (3)C6A—C7A—N4A—C4A−178.9 (2)
C3B—C2B—C10B—C11B−58.6 (3)N5B—C5B—N4B—C4B179.9 (2)
C8B—C2B—C10B—C11B−177.2 (2)C1B—C5B—N4B—C4B0.0 (3)
C1B—C2B—C10B—C9B−117.4 (2)N5B—C5B—N4B—C7B−4.0 (3)
C3B—C2B—C10B—C9B117.5 (2)C1B—C5B—N4B—C7B176.2 (2)
C8B—C2B—C10B—C9B−1.1 (2)N2B—C4B—N4B—C5B177.7 (2)
C9A—C10A—C11A—C12A0.0 (3)C3B—C4B—N4B—C5B−3.1 (3)
C2A—C10A—C11A—C12A−177.2 (2)N2B—C4B—N4B—C7B2.1 (3)
C9B—C10B—C11B—C12B−0.1 (3)C3B—C4B—N4B—C7B−178.7 (2)
C2B—C10B—C11B—C12B175.6 (2)C6B—C7B—N4B—C5B4.0 (3)
C10A—C11A—C12A—C13A0.6 (4)C6B—C7B—N4B—C4B−179.9 (2)
C10A—C11A—C12A—Cl1−179.50 (17)N4A—C5A—N5A—C6A−3.8 (3)
C10B—C11B—C12B—C13B0.5 (4)C1A—C5A—N5A—C6A176.6 (2)
C10B—C11B—C12B—Cl3180.00 (18)C7A—C6A—N5A—C5A3.8 (3)
C11A—C12A—C13A—C14A−2.2 (4)C1B—C5B—N5B—C6B−178.1 (3)
Cl1—C12A—C13A—C14A177.9 (2)N4B—C5B—N5B—C6B2.2 (3)
C11B—C12B—C13B—C14B0.5 (4)C7B—C6B—N5B—C5B0.4 (3)
D—H···AD—HH···AD···AD—H···A
N3B—H3B···O4A0.861.912.774 (3)179
N5A—H5A···O1A0.862.062.592 (3)119
N5B—H5B···O1B0.862.082.604 (3)119
N2A—H10···O4A0.861.852.510 (3)132
N2B—H12···O4B0.861.862.515 (3)132
N3A—H3A···O4Bi0.861.962.823 (2)177
N5A—H5A···O3Bii0.862.423.131 (3)140
N5B—H5B···O3Aiii0.862.262.899 (3)131
C7A—H5···O3Aii0.972.583.302 (3)132
C7A—H6···O1Biv0.972.593.221 (3)123
C7A—H5···Cg1ii0.972.893.679 (3)139
C7B—H8···Cg2v0.972.853.747 (3)155
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 and Cg2 are the centroids of rings C1A–C5A/N4A and C1B–C5B/N4B, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
N3B—H3B⋯O4A 0.861.912.774 (3)179
N5A—H5A⋯O1A 0.862.062.592 (3)119
N5B—H5B⋯O1B 0.862.082.604 (3)119
N2A—H10⋯O4A 0.861.852.510 (3)132
N2B—H12⋯O4B 0.861.862.515 (3)132
N3A—H3A⋯O4B i 0.861.962.823 (2)177
N5A—H5A⋯O3B ii 0.862.423.131 (3)140
N5B—H5B⋯O3A iii 0.862.262.899 (3)131
C7A—H5⋯O3A ii 0.972.583.302 (3)132
C7A—H6⋯O1B iv 0.972.593.221 (3)123
C7A—H5⋯Cg1ii 0.972.893.679 (3)139
C7B—H8⋯Cg2v 0.972.853.747 (3)155

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  5-Amino-6-benzoyl-8-nitro-2,3-di-hydro-1H-spiro-[imidazo[1,2-a]pyridine-7,3'-indolin]-2'-one dimethyl sulfoxide monosolvate.

Authors:  R A Nagalakshmi; J Suresh; S Sivakumar; R Ranjith Kumar; P L Nilantha Lakshman
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-04-26

3.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  3 in total
  2 in total

1.  Synthesis of spiroimidazopyridineoxindole, spiropyridopyrimidineoxindole and spiropyridodiazepineoxindole derivatives based on heterocyclic ketene aminals via a four-component reaction.

Authors:  Fatemeh Rahimi; Mohammad Bayat; Hajar Hosseini
Journal:  RSC Adv       Date:  2019-05-24       Impact factor: 4.036

2.  Crystal structure and Hirshfeld surface analysis of 5-amino-5'-bromo-2'-oxo-2,3-di-hydro-1H-spiro-[imidazo[1,2-a]pyridine-7,3'-indoline]-6,8-dicarbo-nitrile dimethyl sulfoxide disolvate.

Authors:  Farid N Naghiyev; Victor N Khrustalev; Anton P Novikov; Mehmet Akkurt; Rovnag M Rzayev; Anzurat A Akobirshoeva; Ibrahim G Mamedov
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2022-05-10
  2 in total

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