Literature DB >> 25309282

Crystal structure of ethyl 2-chloro-5,8-di-meth-oxy-quinoline-3-carboxyl-ate.

Hasna Hayour1, Abdelmalek Bouraiou1, Sofiane Bouacida2, Saida Benzerka3, Ali Belfaitah1.   

Abstract

In the title compound, C14H14ClNO4, the dihedral angle between the quinoline ring system (r.m.s. deviation = 0.0142 Å) and ester planes is 18.99 (3)°. The C-O-C-Cm (m = meth-yl) torsion angle is -172.08 (10)°, indicating a trans conformation. In the crystal, the mol-ecules are linked by C-H⋯O and C-H⋯N inter-actions, generating layers lying parallel to (101). Aromatic π-π stacking [centroid-centroid distances = 3.557 (2) and 3.703 (2)Å] links the layers into a three-dimensional network.

Entities:  

Keywords:  crystal structure; ester; hydrogen bonding; quinoline derivatives; π–π stacking

Year:  2014        PMID: 25309282      PMCID: PMC4186085          DOI: 10.1107/S1600536814017309

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis and applications of quinoline derivatives, see: Wang et al. (2011 ▶); Benzerka et al. (2012 ▶); Valdez et al. (2009 ▶). For our previous work, see: Bouraiou et al. (2012 ▶); Hayour et al. (2014 ▶); Benzerka et al. (2012 ▶).

Experimental

Crystal data

C14H14ClNO4 M = 295.71 Triclinic, a = 7.512 (4) Å b = 9.759 (5) Å c = 9.811 (5) Å α = 76.071 (10)° β = 72.021 (10)° γ = 86.037 (10)° V = 664.0 (6) Å3 Z = 2 Mo Kα radiation μ = 0.30 mm−1 T = 150 K 0.25 × 0.14 × 0.12 mm

Data collection

Bruker APEXII diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2002 ▶) T min = 0.690, T max = 0.747 10769 measured reflections 5204 independent reflections 4090 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.103 S = 1.04 5204 reflections 184 parameters H-atom parameters constrained Δρmax = 0.5 e Å−3 Δρmin = −0.24 e Å−3

Data collection: APEX2 (Bruker, 2006 ▶); cell refinement: SAINT (Bruker, 2006 ▶); data reduction: SAINT; program(s) used to solve structure: SIR2002 (Burla et al., 2005 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 2012 ▶) and DIAMOND (Brandenburg & Berndt, 2001 ▶); software used to prepare material for publication: WinGX (Farrugia, 2012 ▶). Crystal structure: contains datablock(s) I. DOI: 10.1107/S1600536814017309/hg5402sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814017309/hg5402Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S1600536814017309/hg5402Isup3.cml Click here for additional data file. . DOI: 10.1107/S1600536814017309/hg5402fig1.tif (Farrugia, 2012) the structure of the title compound with the atomic labelling scheme. Displacement are drawn at the 50% probability level. Click here for additional data file. b . DOI: 10.1107/S1600536814017309/hg5402fig2.tif (Brandenburg & Berndt, 2001) A diagram of the layered crystal packing of (I) viewed down the b axis and showing hydrogen bond [C—H⋯O in red and C—H⋯N in black] as dashed line. CCDC reference: 1016211 Additional supporting information: crystallographic information; 3D view; checkCIF report
C14H14ClNO4Z = 2
Mr = 295.71F(000) = 308
Triclinic, P1Dx = 1.479 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.512 (4) ÅCell parameters from 4109 reflections
b = 9.759 (5) Åθ = 2.7–34.1°
c = 9.811 (5) ŵ = 0.30 mm1
α = 76.071 (10)°T = 150 K
β = 72.021 (10)°Prism, colorless
γ = 86.037 (10)°0.25 × 0.14 × 0.12 mm
V = 664.0 (6) Å3
Bruker APEXII diffractometer4090 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
CCD rotation images, thin slices scansθmax = 34.7°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 2002)h = −11→11
Tmin = 0.690, Tmax = 0.747k = −15→15
10769 measured reflectionsl = −15→15
5204 independent reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.103H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0528P)2 + 0.079P] where P = (Fo2 + 2Fc2)/3
5204 reflections(Δ/σ)max = 0.001
184 parametersΔρmax = 0.5 e Å3
0 restraintsΔρmin = −0.24 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C11.27548 (18)1.02335 (11)0.38370 (13)0.0317 (2)
H1B1.34741.01840.45040.048*
H1A1.14781.04510.43040.048*
H1C1.32621.09580.29650.048*
C21.28321 (17)0.88354 (11)0.34275 (11)0.0266 (2)
H2A1.21180.88730.27470.032*
H2B1.41160.85990.29610.032*
C31.21881 (13)0.64349 (10)0.46758 (10)0.01689 (16)
C41.11813 (13)0.54830 (9)0.61114 (10)0.01547 (15)
C51.14674 (13)0.39997 (10)0.64961 (10)0.01641 (16)
C60.92888 (13)0.37156 (9)0.87752 (10)0.01595 (16)
C70.83649 (14)0.28087 (10)1.01633 (10)0.01932 (17)
C80.82466 (19)0.05352 (12)1.17645 (13)0.0316 (2)
H8A0.8799−0.03811.1760.047*
H8B0.69080.04481.20730.047*
H8C0.86180.09431.24340.047*
C90.70785 (14)0.33822 (11)1.12113 (10)0.02025 (18)
H90.64740.27951.21160.024*
C100.66446 (13)0.48421 (11)1.09552 (10)0.01941 (17)
H100.57610.51961.16830.023*
C110.75286 (13)0.57316 (10)0.96332 (10)0.01729 (16)
C120.88663 (12)0.51757 (9)0.85187 (10)0.01559 (16)
C130.98519 (13)0.60393 (9)0.71557 (10)0.01569 (16)
H130.96030.70010.69550.019*
C140.61166 (16)0.78024 (12)1.03759 (11)0.0250 (2)
H14A0.48630.74391.06910.038*
H14B0.61080.88060.99990.038*
H14C0.6610.75981.11960.038*
N11.05905 (11)0.31542 (8)0.77389 (9)0.01767 (15)
O11.20348 (11)0.77897 (8)0.47853 (8)0.02506 (16)
O20.88630 (12)0.14209 (8)1.03191 (8)0.02716 (17)
O31.30129 (11)0.60788 (8)0.35513 (8)0.02479 (16)
O40.72630 (11)0.71537 (8)0.92457 (8)0.02404 (16)
Cl11.31414 (4)0.31664 (3)0.52818 (3)0.02578 (7)
U11U22U33U12U13U23
C10.0359 (6)0.0187 (5)0.0298 (5)−0.0004 (4)0.0026 (5)−0.0019 (4)
C20.0336 (6)0.0190 (4)0.0186 (4)−0.0029 (4)0.0014 (4)0.0003 (3)
C30.0171 (4)0.0168 (4)0.0160 (4)−0.0001 (3)−0.0032 (3)−0.0043 (3)
C40.0161 (4)0.0154 (4)0.0144 (4)0.0003 (3)−0.0030 (3)−0.0044 (3)
C50.0173 (4)0.0158 (4)0.0164 (4)0.0020 (3)−0.0038 (3)−0.0064 (3)
C60.0172 (4)0.0150 (4)0.0156 (4)−0.0006 (3)−0.0043 (3)−0.0040 (3)
C70.0221 (4)0.0163 (4)0.0184 (4)−0.0029 (3)−0.0048 (3)−0.0028 (3)
C80.0421 (7)0.0189 (5)0.0245 (5)−0.0025 (4)−0.0018 (5)0.0024 (4)
C90.0207 (4)0.0213 (4)0.0160 (4)−0.0050 (3)−0.0021 (3)−0.0024 (3)
C100.0176 (4)0.0231 (4)0.0160 (4)−0.0005 (3)−0.0017 (3)−0.0060 (3)
C110.0174 (4)0.0179 (4)0.0157 (4)0.0019 (3)−0.0033 (3)−0.0051 (3)
C120.0153 (4)0.0163 (4)0.0144 (4)−0.0002 (3)−0.0030 (3)−0.0041 (3)
C130.0170 (4)0.0140 (4)0.0149 (4)0.0006 (3)−0.0030 (3)−0.0036 (3)
C140.0278 (5)0.0267 (5)0.0207 (4)0.0105 (4)−0.0046 (4)−0.0120 (4)
N10.0199 (4)0.0154 (3)0.0174 (3)0.0006 (3)−0.0046 (3)−0.0047 (3)
O10.0331 (4)0.0153 (3)0.0183 (3)−0.0012 (3)0.0037 (3)−0.0026 (2)
O20.0384 (4)0.0146 (3)0.0212 (3)−0.0004 (3)−0.0009 (3)−0.0010 (3)
O30.0300 (4)0.0243 (4)0.0163 (3)−0.0032 (3)0.0012 (3)−0.0075 (3)
O40.0294 (4)0.0186 (3)0.0183 (3)0.0073 (3)0.0005 (3)−0.0054 (3)
Cl10.02904 (13)0.02190 (12)0.02243 (12)0.00813 (9)−0.00059 (9)−0.00934 (9)
C1—C21.5050 (17)C7—C91.3760 (14)
C1—H1B0.96C8—O21.4257 (14)
C1—H1A0.96C8—H8A0.96
C1—H1C0.96C8—H8B0.96
C2—O11.4534 (13)C8—H8C0.96
C2—H2A0.97C9—C101.4189 (15)
C2—H2B0.97C9—H90.93
C3—O31.2062 (12)C10—C111.3722 (14)
C3—O11.3463 (13)C10—H100.93
C3—C41.4928 (13)C11—O41.3656 (13)
C4—C131.3796 (13)C11—C121.4254 (13)
C4—C51.4241 (14)C12—C131.4068 (13)
C5—N11.3025 (13)C13—H130.93
C5—Cl11.7500 (10)C14—O41.4301 (12)
C6—N11.3677 (12)C14—H14A0.96
C6—C121.4173 (14)C14—H14B0.96
C6—C71.4286 (14)C14—H14C0.96
C7—O21.3650 (14)
C2—C1—H1B109.5H8A—C8—H8B109.5
C2—C1—H1A109.5O2—C8—H8C109.5
H1B—C1—H1A109.5H8A—C8—H8C109.5
C2—C1—H1C109.5H8B—C8—H8C109.5
H1B—C1—H1C109.5C7—C9—C10122.07 (9)
H1A—C1—H1C109.5C7—C9—H9119
O1—C2—C1106.85 (9)C10—C9—H9119
O1—C2—H2A110.4C11—C10—C9120.01 (9)
C1—C2—H2A110.4C11—C10—H10120
O1—C2—H2B110.4C9—C10—H10120
C1—C2—H2B110.4O4—C11—C10126.18 (8)
H2A—C2—H2B108.6O4—C11—C12114.27 (8)
O3—C3—O1123.25 (9)C10—C11—C12119.55 (9)
O3—C3—C4126.28 (9)C13—C12—C6117.50 (8)
O1—C3—C4110.46 (8)C13—C12—C11122.18 (9)
C13—C4—C5116.02 (8)C6—C12—C11120.29 (8)
C13—C4—C3119.42 (9)C4—C13—C12121.12 (9)
C5—C4—C3124.56 (8)C4—C13—H13119.4
N1—C5—C4125.27 (8)C12—C13—H13119.4
N1—C5—Cl1114.12 (7)O4—C14—H14A109.5
C4—C5—Cl1120.60 (7)O4—C14—H14B109.5
N1—C6—C12121.71 (8)H14A—C14—H14B109.5
N1—C6—C7118.96 (9)O4—C14—H14C109.5
C12—C6—C7119.31 (8)H14A—C14—H14C109.5
O2—C7—C9125.81 (9)H14B—C14—H14C109.5
O2—C7—C6115.43 (9)C5—N1—C6118.38 (8)
C9—C7—C6118.76 (9)C3—O1—C2115.86 (8)
O2—C8—H8A109.5C7—O2—C8116.99 (8)
O2—C8—H8B109.5C11—O4—C14116.88 (8)
O3—C3—C4—C13−160.43 (10)C7—C6—C12—C11−0.20 (13)
O1—C3—C4—C1318.58 (12)O4—C11—C12—C131.56 (13)
O3—C3—C4—C518.55 (16)C10—C11—C12—C13−178.38 (9)
O1—C3—C4—C5−162.43 (9)O4—C11—C12—C6179.62 (8)
C13—C4—C5—N1−0.45 (14)C10—C11—C12—C6−0.32 (14)
C3—C4—C5—N1−179.46 (9)C5—C4—C13—C120.60 (13)
C13—C4—C5—Cl1−178.93 (7)C3—C4—C13—C12179.67 (8)
C3—C4—C5—Cl12.06 (13)C6—C12—C13—C4−0.11 (13)
N1—C6—C7—O2−1.04 (13)C11—C12—C13—C4178.00 (9)
C12—C6—C7—O2−179.64 (8)C4—C5—N1—C6−0.23 (14)
N1—C6—C7—C9178.96 (9)Cl1—C5—N1—C6178.33 (7)
C12—C6—C7—C90.36 (14)C12—C6—N1—C50.77 (13)
O2—C7—C9—C10179.98 (9)C7—C6—N1—C5−177.79 (9)
C6—C7—C9—C10−0.02 (15)O3—C3—O1—C23.72 (15)
C7—C9—C10—C11−0.50 (15)C4—C3—O1—C2−175.33 (8)
C9—C10—C11—O4−179.27 (9)C1—C2—O1—C3−172.08 (10)
C9—C10—C11—C120.66 (14)C9—C7—O2—C8−11.40 (15)
N1—C6—C12—C13−0.60 (13)C6—C7—O2—C8168.60 (9)
C7—C6—C12—C13177.95 (9)C10—C11—O4—C147.48 (15)
N1—C6—C12—C11−178.76 (9)C12—C11—O4—C14−172.46 (9)
D—H···AD—HH···AD···AD—H···A
C10—H10···O3i0.932.563.482 (2)173
C14—H14C···N1ii0.962.613.476 (2)150
C13—H13···O10.932.342.6713 (19)101
C13—H13···O40.932.422.7366 (19)100
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C10—H10⋯O3i 0.932.563.482 (2)173
C14—H14C⋯N1ii 0.962.613.476 (2)150

Symmetry codes: (i) ; (ii) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A new quinoline derivative with cytotoxic activity from Streptomyces sp. neau50.

Authors:  Xiang-Jing Wang; Dian-Liang Gong; Ji-Dong Wang; Ji Zhang; Chong-Xi Liu; Wen-Sheng Xiang
Journal:  Bioorg Med Chem Lett       Date:  2011-03-14       Impact factor: 2.823

3.  rac-2-(2-Chloro-6-methyl-quinolin-3-yl)-2,3-dihydro-quinolin-4(1H)-one.

Authors:  Abdelmalek Bouraiou; Sofiane Bouacida; Carboni Bertrand; Thierry Roisnel; Ali Belfaitah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-05-12

4.  7-Meth-oxy-2-phenyl-quinoline-3-carbaldehyde.

Authors:  Hasna Hayour; Abdelmalek Bouraiou; Sofiane Bouacida; Saida Benzerka; Ali Belfaitah
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-01-22
  4 in total

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